FFCP PHASE1:Mm9::chr12:28022462..28022471,-: Difference between revisions
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|id=chr12:28022462..28022471,- | |id=chr12:28022462..28022471,- | ||
|ontology_enrichment_celltype=CL:0000117!1.25e-38!23;CL:0000337!1.25e-38!23;CL:0000540!3.76e-26!33;CL:0000047!3.76e-26!33;CL:0000031!3.76e-26!33;CL:0000404!3.76e-26!33;CL:0002609!6.48e-26!6;CL:0000393!9.94e-22!39;CL:0000211!9.94e-22!39;CL:0002319!1.83e-19!43;CL:0000221!5.81e-19!44;CL:0000133!5.81e-19!44;CL:0000055!2.27e-16!50;CL:0002608!1.24e-13!3;CL:0002613!4.25e-13!3;CL:0002321!6.29e-11!70;CL:0000220!6.29e-11!70;CL:0000723!8.85e-08!91;CL:0000048!8.85e-08!91;CL:0000034!3.95e-07!97 | |ontology_enrichment_celltype=CL:0000117!1.25e-38!23;CL:0000337!1.25e-38!23;CL:0000540!3.76e-26!33;CL:0000047!3.76e-26!33;CL:0000031!3.76e-26!33;CL:0000404!3.76e-26!33;CL:0002609!6.48e-26!6;CL:0000393!9.94e-22!39;CL:0000211!9.94e-22!39;CL:0002319!1.83e-19!43;CL:0000221!5.81e-19!44;CL:0000133!5.81e-19!44;CL:0000055!2.27e-16!50;CL:0002608!1.24e-13!3;CL:0002613!4.25e-13!3;CL:0002321!6.29e-11!70;CL:0000220!6.29e-11!70;CL:0000723!8.85e-08!91;CL:0000048!8.85e-08!91;CL:0000034!3.95e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.38e-44,6;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0002608,4.56e-11,3;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.86e-22!34;UBERON:0002791!9.10e-16!29;UBERON:0003528!9.10e-16!29;UBERON:0001893!9.10e-16!29;UBERON:0001049!2.34e-13!52;UBERON:0005068!2.34e-13!52;UBERON:0006241!2.34e-13!52;UBERON:0007135!2.34e-13!52;UBERON:0001017!6.20e-12!73;UBERON:0005743!6.20e-12!73;UBERON:0000073!1.54e-11!75;UBERON:0001016!1.54e-11!75;UBERON:0002780!3.02e-11!39;UBERON:0001890!3.02e-11!39;UBERON:0006240!3.02e-11!39;UBERON:0003080!6.43e-11!40;UBERON:0002346!1.28e-10!71;UBERON:0003075!1.28e-10!71;UBERON:0007284!1.28e-10!71;UBERON:0003056!2.81e-10!49;UBERON:0001954!7.82e-10!7;UBERON:0003022!7.82e-10!7;UBERON:0002421!7.82e-10!7;UBERON:0000349!7.82e-10!7;UBERON:0002600!7.82e-10!7;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0004121!6.38e-09!102;UBERON:0000924!6.38e-09!102;UBERON:0006601!6.38e-09!102;UBERON:0002616!1.44e-08!49;UBERON:0000955!2.33e-08!50;UBERON:0006238!2.33e-08!50;UBERON:0002420!2.54e-08!8;UBERON:0007245!2.54e-08!8;UBERON:0010009!2.54e-08!8;UBERON:0010011!2.54e-08!8;UBERON:0000454!2.54e-08!8;UBERON:0000369!4.78e-08!5;UBERON:0002435!4.78e-08!5;UBERON:0000204!4.78e-08!5;UBERON:0010082!4.78e-08!5;UBERON:0001948!6.28e-08!5;UBERON:0002315!6.28e-08!5;UBERON:0000033!1.58e-07!63 | |ontology_enrichment_uberon=UBERON:0002020!9.86e-22!34;UBERON:0002791!9.10e-16!29;UBERON:0003528!9.10e-16!29;UBERON:0001893!9.10e-16!29;UBERON:0001049!2.34e-13!52;UBERON:0005068!2.34e-13!52;UBERON:0006241!2.34e-13!52;UBERON:0007135!2.34e-13!52;UBERON:0001017!6.20e-12!73;UBERON:0005743!6.20e-12!73;UBERON:0000073!1.54e-11!75;UBERON:0001016!1.54e-11!75;UBERON:0002780!3.02e-11!39;UBERON:0001890!3.02e-11!39;UBERON:0006240!3.02e-11!39;UBERON:0003080!6.43e-11!40;UBERON:0002346!1.28e-10!71;UBERON:0003075!1.28e-10!71;UBERON:0007284!1.28e-10!71;UBERON:0003056!2.81e-10!49;UBERON:0001954!7.82e-10!7;UBERON:0003022!7.82e-10!7;UBERON:0002421!7.82e-10!7;UBERON:0000349!7.82e-10!7;UBERON:0002600!7.82e-10!7;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0004121!6.38e-09!102;UBERON:0000924!6.38e-09!102;UBERON:0006601!6.38e-09!102;UBERON:0002616!1.44e-08!49;UBERON:0000955!2.33e-08!50;UBERON:0006238!2.33e-08!50;UBERON:0002420!2.54e-08!8;UBERON:0007245!2.54e-08!8;UBERON:0010009!2.54e-08!8;UBERON:0010011!2.54e-08!8;UBERON:0000454!2.54e-08!8;UBERON:0000369!4.78e-08!5;UBERON:0002435!4.78e-08!5;UBERON:0000204!4.78e-08!5;UBERON:0010082!4.78e-08!5;UBERON:0001948!6.28e-08!5;UBERON:0002315!6.28e-08!5;UBERON:0000033!1.58e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,1.47227472945967,0,0.220868540951614,0.489963196859816,1.91690942036473,0.919218786610021,0,0,0,0.395658863190582,0.548925861614458,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,1.47227472945967,0,0.220868540951614,0.489963196859816,1.91690942036473,0.919218786610021,0,0,0,0.395658863190582,0.548925861614458,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:28022462..28022471,- | |short_description=p@chr12:28022462..28022471,- | ||
}} | }} |
Revision as of 05:39, 14 November 2012
Short description: | p@chr12:28022462..28022471, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28022462..28022471, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.38e-44 | 6 |
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
hippocampal neuron | 4.56e-11 | 3 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.90e-13 | 21 |
cerebral hemisphere | 1.90e-13 | 21 |
pallium | 1.90e-13 | 21 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.