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FFCP PHASE1:Mm9::chr9:60535266..60535292,-: Difference between revisions

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|id=chr9:60535266..60535292,-
|id=chr9:60535266..60535292,-
|ontology_enrichment_celltype=CL:0000117!2.22e-12!23;CL:0000337!2.22e-12!23;CL:0000540!1.02e-09!33;CL:0000047!1.02e-09!33;CL:0000031!1.02e-09!33;CL:0000404!1.02e-09!33;CL:0000393!2.45e-08!39;CL:0000211!2.45e-08!39
|ontology_enrichment_celltype=CL:0000117!2.22e-12!23;CL:0000337!2.22e-12!23;CL:0000540!1.02e-09!33;CL:0000047!1.02e-09!33;CL:0000031!1.02e-09!33;CL:0000404!1.02e-09!33;CL:0000393!2.45e-08!39;CL:0000211!2.45e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.67e-17,23;CL:0000337,3.67e-17,23;CL:0000540,1.16e-09,33;CL:0000047,1.16e-09,33;CL:0000031,1.16e-09,33;CL:0000404,1.16e-09,33;CL:0000393,9.12e-08,39;CL:0000211,9.12e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.56e-24!63;UBERON:0002346!8.31e-23!71;UBERON:0003075!8.31e-23!71;UBERON:0007284!8.31e-23!71;UBERON:0003056!4.53e-22!49;UBERON:0001049!1.89e-21!52;UBERON:0005068!1.89e-21!52;UBERON:0006241!1.89e-21!52;UBERON:0007135!1.89e-21!52;UBERON:0000955!1.02e-20!50;UBERON:0006238!1.02e-20!50;UBERON:0002616!3.16e-20!49;UBERON:0001017!4.18e-20!73;UBERON:0005743!4.18e-20!73;UBERON:0000073!5.71e-19!75;UBERON:0001016!5.71e-19!75;UBERON:0004121!2.07e-18!102;UBERON:0000924!2.07e-18!102;UBERON:0006601!2.07e-18!102;UBERON:0003080!3.43e-18!40;UBERON:0002780!1.58e-17!39;UBERON:0001890!1.58e-17!39;UBERON:0006240!1.58e-17!39;UBERON:0002020!1.33e-16!34;UBERON:0002791!3.74e-14!29;UBERON:0003528!3.74e-14!29;UBERON:0001893!3.74e-14!29;UBERON:0000153!3.32e-10!94;UBERON:0007811!4.54e-10!86;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!2.67e-08!17;UBERON:0000025!3.22e-08!114;UBERON:0004111!5.83e-08!122;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10
|ontology_enrichment_uberon=UBERON:0000033!4.56e-24!63;UBERON:0002346!8.31e-23!71;UBERON:0003075!8.31e-23!71;UBERON:0007284!8.31e-23!71;UBERON:0003056!4.53e-22!49;UBERON:0001049!1.89e-21!52;UBERON:0005068!1.89e-21!52;UBERON:0006241!1.89e-21!52;UBERON:0007135!1.89e-21!52;UBERON:0000955!1.02e-20!50;UBERON:0006238!1.02e-20!50;UBERON:0002616!3.16e-20!49;UBERON:0001017!4.18e-20!73;UBERON:0005743!4.18e-20!73;UBERON:0000073!5.71e-19!75;UBERON:0001016!5.71e-19!75;UBERON:0004121!2.07e-18!102;UBERON:0000924!2.07e-18!102;UBERON:0006601!2.07e-18!102;UBERON:0003080!3.43e-18!40;UBERON:0002780!1.58e-17!39;UBERON:0001890!1.58e-17!39;UBERON:0006240!1.58e-17!39;UBERON:0002020!1.33e-16!34;UBERON:0002791!3.74e-14!29;UBERON:0003528!3.74e-14!29;UBERON:0001893!3.74e-14!29;UBERON:0000153!3.32e-10!94;UBERON:0007811!4.54e-10!86;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!2.67e-08!17;UBERON:0000025!3.22e-08!114;UBERON:0004111!5.83e-08!122;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.38e-32,64;UBERON:0003075,1.38e-32,64;UBERON:0007284,1.38e-32,64;UBERON:0000073,6.91e-32,54;UBERON:0001049,9.95e-30,52;UBERON:0005068,9.95e-30,52;UBERON:0006241,9.95e-30,52;UBERON:0007135,9.95e-30,52;UBERON:0003056,1.81e-28,49;UBERON:0010371,3.00e-26,73;UBERON:0001017,7.72e-26,73;UBERON:0000955,8.79e-26,47;UBERON:0006238,8.79e-26,47;UBERON:0004121,4.65e-25,95;UBERON:0000924,4.65e-25,95;UBERON:0006601,4.65e-25,95;UBERON:0002616,4.76e-25,46;UBERON:0001016,1.17e-24,75;UBERON:0002020,3.63e-24,34;UBERON:0003080,2.02e-23,40;UBERON:0002780,1.96e-22,39;UBERON:0001890,1.96e-22,39;UBERON:0006240,1.96e-22,39;UBERON:0003528,2.21e-20,29;UBERON:0002791,2.21e-20,29;UBERON:0001893,2.21e-20,29;UBERON:0010314,7.54e-18,92;UBERON:0000956,1.78e-13,21;UBERON:0001869,1.78e-13,21;UBERON:0000203,1.78e-13,21;UBERON:0002619,2.06e-12,17;UBERON:0002021,4.81e-11,10;UBERON:0000411,4.81e-11,10;UBERON:0001950,4.81e-11,10;UBERON:0000025,1.62e-08,114;UBERON:0002420,3.25e-08,8;UBERON:0007245,3.25e-08,8;UBERON:0010009,3.25e-08,8;UBERON:0010011,3.25e-08,8;UBERON:0000454,3.25e-08,8;UBERON:0004111,1.83e-07,122;UBERON:0003076,9.22e-07,12;UBERON:0003057,9.22e-07,12
|phase1_expression=0.640595388419176,0,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.159992422793407,0,0,0,0.646413698057667,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.10128051297009,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,5.05791152148994,10.5798195854407,3.80298842103708,0.338844532069132,0,0,0,0,0,0,0.829516898467821,2.02508907497536,1.89292465216244,2.28520787523043,1.54607978666129,4.5321595709533,5.84657373211242,2.75765635983006,4.40463523997555,6.76742891851495,5.06901559745603,6.3305418110493,7.86793734980723,3.64639359389732,1.95428099300967,3.93933827022176,4.12555268997387,4.12480019663135,5.12538050876771,5.77838282058432,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.776813650941515,0,0.173485326766136,0.304465478312141,0.922461989024234,0.60289056221049,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0,0,7.02673912827713,7.95897485891129,0,0.479260498023681,0,0.254140454146129,6.74057877321702,13.2675174817402,7.16229807043327,7.99591872884472,6.39288643325826,7.68815764870372,7.46309810111685,0.305518091550949,0,0,0.631325567659422,1.95180664444056,1.37941262660084,3.60124259610698,4.82255417074288,4.69451844144162,4.22775276940004,3.5606655332697,2.32833033665114,0.215567992932842,0.756424320671277,1.05570674498369,0.876782929710299,0,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.925602677324269,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0,0.268412837520744,3.15434922846191,3.91037527041281,0,0,0.639864751605702,0.696710015581316,0.77320476793256,0.403367049246685,0.22237804384487,0.951128130562796,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,1.51593129416388,0.977789858652155,1.35796068620151,2.11221223459652,0.837531287209079,1.19021820443007,1.36593553500459,0.157635144106191,0.664394068946325,0,0.491589944147214,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,2.56880943980467,1.99259867206745,0,0,0.94652465824877,0.390438744296638,0.861693590931196,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0,0,2.57057053137446,0.709700426041343,0.712262414669021,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0.590603785761546,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,5.10659408630682,1.44048875225048,0.776152102696527,0.857348140126369,1.95074257006501,0.891844088010353,1.31639216481697,2.13125464380219,0,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,2.41052892613663,0,0.619160603889667,0.370389054739423,0,0,0,6.62915876976036,8.6769900440668,5.66619892598138,0,1.10717597753397,0.609958401380546,2.05210147561422,1.88179466413022,2.40198820120795,0.269728692769641,0.495920734352016,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.469428954583016,0.2604087696879,0.838874755405687,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0.192423683280659,0,1.13365191807606,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,2.82375921308533,6.44455331110048,5.15605962095457,3.78077001156113,10.9613203163303,15.107877947794,10.1253375034771,6.30449684513909,11.7817026335893,13.4617681055473,0.207574695168353,2.79317411380722,2.90247129782028,1.45864030240976,0.628839487883947,0.367687016900028,1.77797382241292,1.64828045791115,0.962757628775446,1.76888048234658,1.2673964994512,1.88626341386076,1.49826411951812,1.79270426733634,1.20614484806788,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,1.91358596174717,2.05721551431249,0.887379030796687,2.14592570952589,1.59881058295561,1.2234219453993,1.4384483341585,1.28049581010941,1.05227884575137,1.08643291076689,0,0.949080144993393,0.985044823755635,2.04615521584845,0.619747364743864,1.15743966588685,2.49810577937946,1.40358965067245,1.28922632428979,0.956441660344217,0,0.231867835620421
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|short_description=p6@Lrrc49
|short_description=p6@Lrrc49
}}
}}

Revision as of 05:06, 14 November 2012

Short description:p6@Lrrc49
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Lrrc49_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 48bp_to_ENSMUST00000114032, ENSMUST00000166168, NM_001146047, uc009pzd.2, uc012gur.1_5end
EntrezGene:Lrrc49
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Lrrc49

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C64.69
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.67e-1723
neuroblast (sensu Vertebrata)3.67e-1723
neuron1.16e-0933
neuronal stem cell1.16e-0933
neuroblast1.16e-0933
electrically signaling cell1.16e-0933
electrically responsive cell9.12e-0839
electrically active cell9.12e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm1.38e-3264
neural plate1.38e-3264
presumptive neural plate1.38e-3264
regional part of nervous system6.91e-3254
neural tube9.95e-3052
neural rod9.95e-3052
future spinal cord9.95e-3052
neural keel9.95e-3052
pre-chordal neural plate1.81e-2849
ecto-epithelium3.00e-2673
central nervous system7.72e-2673
brain8.79e-2647
future brain8.79e-2647
ectoderm-derived structure4.65e-2595
ectoderm4.65e-2595
presumptive ectoderm4.65e-2595
regional part of brain4.76e-2546
nervous system1.17e-2475
gray matter3.63e-2434
anterior neural tube2.02e-2340
regional part of forebrain1.96e-2239
forebrain1.96e-2239
future forebrain1.96e-2239
brain grey matter2.21e-2029
regional part of telencephalon2.21e-2029
telencephalon2.21e-2029
structure with developmental contribution from neural crest7.54e-1892
cerebral cortex1.78e-1321
cerebral hemisphere1.78e-1321
pallium1.78e-1321
regional part of cerebral cortex2.06e-1217
occipital lobe4.81e-1110
visual cortex4.81e-1110
neocortex4.81e-1110
tube1.62e-08114
basal ganglion3.25e-088
nuclear complex of neuraxis3.25e-088
aggregate regional part of brain3.25e-088
collection of basal ganglia3.25e-088
cerebral subcortex3.25e-088
anatomical conduit1.83e-07122
posterior neural tube9.22e-0712
chordal neural plate9.22e-0712







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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