FFCP PHASE1:Mm9::chr19:5024162..5024182,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:5024162..5024182,+ | |id=chr19:5024162..5024182,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.76e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.85e-09!43;UBERON:0007100!7.43e-08!18;UBERON:0000948!7.43e-08!18;UBERON:0005498!7.43e-08!18;UBERON:0004140!7.43e-08!18;UBERON:0009881!7.43e-08!18;UBERON:0004141!7.43e-08!18;UBERON:0003084!7.43e-08!18;UBERON:0007005!7.43e-08!18;UBERON:0004139!7.43e-08!18;UBERON:0004291!7.43e-08!18 | |ontology_enrichment_uberon=UBERON:0003103!1.85e-09!43;UBERON:0007100!7.43e-08!18;UBERON:0000948!7.43e-08!18;UBERON:0005498!7.43e-08!18;UBERON:0004140!7.43e-08!18;UBERON:0009881!7.43e-08!18;UBERON:0004141!7.43e-08!18;UBERON:0003084!7.43e-08!18;UBERON:0007005!7.43e-08!18;UBERON:0004139!7.43e-08!18;UBERON:0004291!7.43e-08!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.53e-20,18;UBERON:0000948,9.53e-20,18;UBERON:0005498,9.53e-20,18;UBERON:0004140,9.53e-20,18;UBERON:0009881,9.53e-20,18;UBERON:0004141,9.53e-20,18;UBERON:0003084,9.53e-20,18;UBERON:0007005,9.53e-20,18;UBERON:0004139,9.53e-20,18;UBERON:0004291,9.53e-20,18;UBERON:0004535,7.64e-15,23;UBERON:0001009,7.64e-15,23;UBERON:0003103,3.48e-14,43;UBERON:0004872,1.64e-09,33;UBERON:0010314,7.97e-08,92;UBERON:0004684,3.76e-07,3;UBERON:0002275,3.76e-07,3;UBERON:0003076,8.00e-07,12;UBERON:0003057,8.00e-07,12;UBERON:0002240,9.21e-07,6;UBERON:0005174,9.21e-07,6;UBERON:0001137,9.21e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0.239316476986009,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.972149495371417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,2.28520787523043,1.32521124570968,0,0.191690942036473,0,1.10115880999389,1.14918604276669,1.0752457327937,0,0,0,1.67509799400829,0,0.763991238884051,1.47314292736834,0.854230084794618,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0.251333182659351,0,0.144599356919912,0,0.808834249737046,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.239630249011841,0,0,1.3481157546434,0.915001205637253,0.376963056338593,0.173824320192276,0,0.41557608911912,0.324482526135515,0.101839363850316,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0.517406741478031,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,1.65721314909647,2.36117078096885,2.46827380619805,2.79040733700489,3.21928081679543,3.15266424391358,4.77223564749093,4.26835406605648,4.13450928683864,5.99419948443863,5.70830299756732,5.63666958793561,0.210289948564127,0.102904612379284,0,0,0,0,0,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0.581857461502877,0.210407459670956,0.505892296994058,0.885660887877613,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.425820255624806,1.06839362200353,0.162886959353576,0.164970122972535,1.32745138339963,0.485561272309963,0.906970670894253,0.754420319023592,0.295301892880773,0,1.29214146584111,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,1.04661582230785,0.496375471371293,0.583353565032143,0.774958940866387,0.844780627453891,0.938857909166032,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0.632022241256357,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,2.26730383615211,0.443971906748129,0.62799699626633,0.335769232728157,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,1.32038438970253,0.936415074698824,0.384150914429216,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.188218760830661,0.338458431566706,0.73171189149109,0.526139422875686,0.950628796921032,0,0.355905054372522,1.18205378850676,1.22769312950907,0.309873682371932,0,0.499621155875892,0.701794825336225,1.50409737833809,3.25190164517034,1.98532277207564,1.85494268496337 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0.239316476986009,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.972149495371417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,2.28520787523043,1.32521124570968,0,0.191690942036473,0,1.10115880999389,1.14918604276669,1.0752457327937,0,0,0,1.67509799400829,0,0.763991238884051,1.47314292736834,0.854230084794618,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0.251333182659351,0,0.144599356919912,0,0.808834249737046,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.239630249011841,0,0,1.3481157546434,0.915001205637253,0.376963056338593,0.173824320192276,0,0.41557608911912,0.324482526135515,0.101839363850316,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0.517406741478031,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,1.65721314909647,2.36117078096885,2.46827380619805,2.79040733700489,3.21928081679543,3.15266424391358,4.77223564749093,4.26835406605648,4.13450928683864,5.99419948443863,5.70830299756732,5.63666958793561,0.210289948564127,0.102904612379284,0,0,0,0,0,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0.581857461502877,0.210407459670956,0.505892296994058,0.885660887877613,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.425820255624806,1.06839362200353,0.162886959353576,0.164970122972535,1.32745138339963,0.485561272309963,0.906970670894253,0.754420319023592,0.295301892880773,0,1.29214146584111,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,1.04661582230785,0.496375471371293,0.583353565032143,0.774958940866387,0.844780627453891,0.938857909166032,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0.632022241256357,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,2.26730383615211,0.443971906748129,0.62799699626633,0.335769232728157,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,1.32038438970253,0.936415074698824,0.384150914429216,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.188218760830661,0.338458431566706,0.73171189149109,0.526139422875686,0.950628796921032,0,0.355905054372522,1.18205378850676,1.22769312950907,0.309873682371932,0,0.499621155875892,0.701794825336225,1.50409737833809,3.25190164517034,1.98532277207564,1.85494268496337 | ||
|short_description=p2@Slc29a2 | |short_description=p2@Slc29a2 | ||
}} | }} |
Revision as of 04:33, 14 November 2012
Short description: | p2@Slc29a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc29a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 156bp_to_ENSMUST00000025826, NM_007854, uc008gbv.2, uc012bgs.1_5end |
EntrezGene: | Slc29a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.53e-20 | 18 |
heart | 9.53e-20 | 18 |
primitive heart tube | 9.53e-20 | 18 |
primary heart field | 9.53e-20 | 18 |
anterior lateral plate mesoderm | 9.53e-20 | 18 |
heart tube | 9.53e-20 | 18 |
heart primordium | 9.53e-20 | 18 |
cardiac mesoderm | 9.53e-20 | 18 |
cardiogenic plate | 9.53e-20 | 18 |
heart rudiment | 9.53e-20 | 18 |
cardiovascular system | 7.64e-15 | 23 |
circulatory system | 7.64e-15 | 23 |
compound organ | 3.48e-14 | 43 |
splanchnic layer of lateral plate mesoderm | 1.64e-09 | 33 |
structure with developmental contribution from neural crest | 7.97e-08 | 92 |
raphe nuclei | 3.76e-07 | 3 |
reticular formation | 3.76e-07 | 3 |
posterior neural tube | 8.00e-07 | 12 |
chordal neural plate | 8.00e-07 | 12 |
spinal cord | 9.21e-07 | 6 |
dorsal region element | 9.21e-07 | 6 |
dorsum | 9.21e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.