Personal tools

FFCP PHASE1:Mm9::chr19:57389216..57389233,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr19:57389216..57389233,-
|id=chr19:57389216..57389233,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.18e-11!52;UBERON:0005068!5.18e-11!52;UBERON:0006241!5.18e-11!52;UBERON:0007135!5.18e-11!52;UBERON:0002020!5.67e-11!34;UBERON:0000955!9.67e-11!50;UBERON:0006238!9.67e-11!50;UBERON:0002616!2.20e-10!49;UBERON:0002791!3.40e-09!29;UBERON:0003528!3.40e-09!29;UBERON:0001893!3.40e-09!29;UBERON:0000033!3.68e-09!63;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0003080!1.14e-07!40;UBERON:0000025!1.56e-07!114;UBERON:0001017!1.72e-07!73;UBERON:0005743!1.72e-07!73;UBERON:0000956!2.28e-07!21;UBERON:0001869!2.28e-07!21;UBERON:0000203!2.28e-07!21;UBERON:0002780!3.40e-07!39;UBERON:0001890!3.40e-07!39;UBERON:0006240!3.40e-07!39;UBERON:0002346!4.00e-07!71;UBERON:0003075!4.00e-07!71;UBERON:0007284!4.00e-07!71;UBERON:0000073!4.59e-07!75;UBERON:0001016!4.59e-07!75;UBERON:0004111!8.93e-07!122
|ontology_enrichment_uberon=UBERON:0001049!5.18e-11!52;UBERON:0005068!5.18e-11!52;UBERON:0006241!5.18e-11!52;UBERON:0007135!5.18e-11!52;UBERON:0002020!5.67e-11!34;UBERON:0000955!9.67e-11!50;UBERON:0006238!9.67e-11!50;UBERON:0002616!2.20e-10!49;UBERON:0002791!3.40e-09!29;UBERON:0003528!3.40e-09!29;UBERON:0001893!3.40e-09!29;UBERON:0000033!3.68e-09!63;UBERON:0002021!2.74e-08!10;UBERON:0000411!2.74e-08!10;UBERON:0001950!2.74e-08!10;UBERON:0003080!1.14e-07!40;UBERON:0000025!1.56e-07!114;UBERON:0001017!1.72e-07!73;UBERON:0005743!1.72e-07!73;UBERON:0000956!2.28e-07!21;UBERON:0001869!2.28e-07!21;UBERON:0000203!2.28e-07!21;UBERON:0002780!3.40e-07!39;UBERON:0001890!3.40e-07!39;UBERON:0006240!3.40e-07!39;UBERON:0002346!4.00e-07!71;UBERON:0003075!4.00e-07!71;UBERON:0007284!4.00e-07!71;UBERON:0000073!4.59e-07!75;UBERON:0001016!4.59e-07!75;UBERON:0004111!8.93e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.72e-20,54;UBERON:0001049,3.37e-18,52;UBERON:0005068,3.37e-18,52;UBERON:0006241,3.37e-18,52;UBERON:0007135,3.37e-18,52;UBERON:0002021,8.05e-16,10;UBERON:0000411,8.05e-16,10;UBERON:0001950,8.05e-16,10;UBERON:0002616,1.19e-15,46;UBERON:0010314,1.25e-15,92;UBERON:0002346,1.29e-15,64;UBERON:0003075,1.29e-15,64;UBERON:0007284,1.29e-15,64;UBERON:0000955,3.68e-15,47;UBERON:0006238,3.68e-15,47;UBERON:0001017,6.21e-14,73;UBERON:0002619,1.37e-13,17;UBERON:0002020,1.91e-13,34;UBERON:0001016,2.55e-13,75;UBERON:0010371,1.32e-12,73;UBERON:0000956,2.66e-12,21;UBERON:0001869,2.66e-12,21;UBERON:0000203,2.66e-12,21;UBERON:0003080,2.92e-12,40;UBERON:0003528,4.84e-12,29;UBERON:0002791,4.84e-12,29;UBERON:0001893,4.84e-12,29;UBERON:0004121,5.01e-12,95;UBERON:0000924,5.01e-12,95;UBERON:0006601,5.01e-12,95;UBERON:0002780,2.50e-11,39;UBERON:0001890,2.50e-11,39;UBERON:0006240,2.50e-11,39;UBERON:0003056,3.98e-11,49;UBERON:0000025,7.68e-10,114;UBERON:0004111,2.93e-09,122;UBERON:0007023,7.48e-08,51;UBERON:0003076,5.59e-07,12;UBERON:0003057,5.59e-07,12
|phase1_expression=0,0.697950815278722,0.909998478779072,2.41971369045464,1.50268718983904,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0.646413698057667,1.14014051673824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.622137673850866,0.405017814995072,0.420649922702764,1.14260393761521,1.10434270475807,0,0.0958454710182364,1.83843757322004,5.50579404996943,1.40456071893706,2.76491759861238,0.131886287730194,0.548925861614458,1.04182674111352,4.4669279840221,0.56276261003168,0.916789486660861,1.76777151284201,0.854230084794618,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.251333182659351,1.23597483867187,4.04878199375753,0,0,0,0.484875253135222,1.86391761218122,12.0040126774734,11.3101221679266,1.02182822083437,0,0,0,2.24685959107234,2.28750301409313,0.125654352112864,5.04090528557602,4.34716277461562,3.1168206683934,1.94689515681309,0.203678727700633,0.373220911830279,1.26361379216837,1.26265113531884,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,2.32833033665114,0,0.189106080167819,0.175951124163949,0,0,0,0.823128545631774,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,1.18058539048442,0.462801338662135,0.232533944750408,1.07309360559848,1.28441876603886,0.658239399653922,0.985004784474571,2.91847714365081,1.31579988682799,3.07370161407471,2.28150911892632,2.10289948564127,1.02904612379284,1.65209391491899,1.32225283331772,0,0,0,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,1.31759163779209,1.25667604400135,0.994782360205754,0.19496408711912,2.69645822596266,1.51296634912286,1.39398891278057,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0.379419222745544,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0,0,0,0,0.335012514883631,0.714130922658041,0,0.630540576424764,0.221464689648775,0,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,3.53211297973142,1.87538698547525,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,1.2178597964584,0.704015124191131,0.42366414172764,0,0.49465875882444,0.161464426695906,0.301564624640779,0.238744688006273,0,0.874442509889552,1.8542530201051,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0.388902376688095,0,0,0.234714477291508,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,6.21227026878773,4.14292712856459,1.14579102687879,3.26521046453006,4.7955776383945,3.7769694869485,3.37511250115903,4.5032120322422,4.98456649882625,6.73088405277366,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,1.03017528619447,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.512201219238954,0.17230640686684,0,0.927074607558844,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.752875043322645,0.761531471025089,0.548783918618318,1.05227884575137,0.543216455383447,1.68342681497322,0.830445126869219,0.394017929502254,0.818462086339379,0.619747364743864,0,0.749431733813838,0.233931608445408,0.429742108096597,1.14772999241306,0,1.15933917810211
|phase1_expression=0,0.697950815278722,0.909998478779072,2.41971369045464,1.50268718983904,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0.646413698057667,1.14014051673824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.622137673850866,0.405017814995072,0.420649922702764,1.14260393761521,1.10434270475807,0,0.0958454710182364,1.83843757322004,5.50579404996943,1.40456071893706,2.76491759861238,0.131886287730194,0.548925861614458,1.04182674111352,4.4669279840221,0.56276261003168,0.916789486660861,1.76777151284201,0.854230084794618,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.251333182659351,1.23597483867187,4.04878199375753,0,0,0,0.484875253135222,1.86391761218122,12.0040126774734,11.3101221679266,1.02182822083437,0,0,0,2.24685959107234,2.28750301409313,0.125654352112864,5.04090528557602,4.34716277461562,3.1168206683934,1.94689515681309,0.203678727700633,0.373220911830279,1.26361379216837,1.26265113531884,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,2.32833033665114,0,0.189106080167819,0.175951124163949,0,0,0,0.823128545631774,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,1.18058539048442,0.462801338662135,0.232533944750408,1.07309360559848,1.28441876603886,0.658239399653922,0.985004784474571,2.91847714365081,1.31579988682799,3.07370161407471,2.28150911892632,2.10289948564127,1.02904612379284,1.65209391491899,1.32225283331772,0,0,0,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,1.31759163779209,1.25667604400135,0.994782360205754,0.19496408711912,2.69645822596266,1.51296634912286,1.39398891278057,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0.379419222745544,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0,0,0,0,0.335012514883631,0.714130922658041,0,0.630540576424764,0.221464689648775,0,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,3.53211297973142,1.87538698547525,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,1.2178597964584,0.704015124191131,0.42366414172764,0,0.49465875882444,0.161464426695906,0.301564624640779,0.238744688006273,0,0.874442509889552,1.8542530201051,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0.388902376688095,0,0,0.234714477291508,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,6.21227026878773,4.14292712856459,1.14579102687879,3.26521046453006,4.7955776383945,3.7769694869485,3.37511250115903,4.5032120322422,4.98456649882625,6.73088405277366,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,1.03017528619447,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.512201219238954,0.17230640686684,0,0.927074607558844,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.752875043322645,0.761531471025089,0.548783918618318,1.05227884575137,0.543216455383447,1.68342681497322,0.830445126869219,0.394017929502254,0.818462086339379,0.619747364743864,0,0.749431733813838,0.233931608445408,0.429742108096597,1.14772999241306,0,1.15933917810211
|short_description=p17@Ablim1
|short_description=p17@Ablim1
}}
}}

Revision as of 01:40, 14 November 2012

Short description:p17@Ablim1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_17_at_Ablim1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 167bp_to_ENSMUST00000111524_5end
EntrezGene:Ablim1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p17@Ablim1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I211.31
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.72e-2054
neural tube3.37e-1852
neural rod3.37e-1852
future spinal cord3.37e-1852
neural keel3.37e-1852
occipital lobe8.05e-1610
visual cortex8.05e-1610
neocortex8.05e-1610
regional part of brain1.19e-1546
structure with developmental contribution from neural crest1.25e-1592
neurectoderm1.29e-1564
neural plate1.29e-1564
presumptive neural plate1.29e-1564
brain3.68e-1547
future brain3.68e-1547
central nervous system6.21e-1473
regional part of cerebral cortex1.37e-1317
gray matter1.91e-1334
nervous system2.55e-1375
ecto-epithelium1.32e-1273
cerebral cortex2.66e-1221
cerebral hemisphere2.66e-1221
pallium2.66e-1221
anterior neural tube2.92e-1240
brain grey matter4.84e-1229
regional part of telencephalon4.84e-1229
telencephalon4.84e-1229
ectoderm-derived structure5.01e-1295
ectoderm5.01e-1295
presumptive ectoderm5.01e-1295
regional part of forebrain2.50e-1139
forebrain2.50e-1139
future forebrain2.50e-1139
pre-chordal neural plate3.98e-1149
tube7.68e-10114
anatomical conduit2.93e-09122
adult organism7.48e-0851
posterior neural tube5.59e-0712
chordal neural plate5.59e-0712







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:57389216..57389233,-&oldid=2290231"