FFCP PHASE1:Mm9::chr16:3908639..3908686,-: Difference between revisions
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|id=chr16:3908639..3908686,- | |id=chr16:3908639..3908686,- | ||
|ontology_enrichment_celltype=CL:0000117!5.10e-07!23;CL:0000337!5.10e-07!23 | |ontology_enrichment_celltype=CL:0000117!5.10e-07!23;CL:0000337!5.10e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.08e-07,23;CL:0000337,5.08e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.42e-12!73;UBERON:0005743!3.42e-12!73;UBERON:0000073!8.05e-12!75;UBERON:0001016!8.05e-12!75;UBERON:0001049!4.91e-11!52;UBERON:0005068!4.91e-11!52;UBERON:0006241!4.91e-11!52;UBERON:0007135!4.91e-11!52;UBERON:0000955!1.84e-10!50;UBERON:0006238!1.84e-10!50;UBERON:0000033!2.02e-10!63;UBERON:0002616!2.39e-10!49;UBERON:0007811!9.14e-10!86;UBERON:0000153!4.23e-09!94;UBERON:0002346!9.92e-09!71;UBERON:0003075!9.92e-09!71;UBERON:0007284!9.92e-09!71;UBERON:0004121!9.62e-08!102;UBERON:0000924!9.62e-08!102;UBERON:0006601!9.62e-08!102;UBERON:0003056!9.81e-08!49;UBERON:0002780!1.05e-07!39;UBERON:0001890!1.05e-07!39;UBERON:0006240!1.05e-07!39;UBERON:0002020!1.35e-07!34;UBERON:0003080!1.54e-07!40 | |ontology_enrichment_uberon=UBERON:0001017!3.42e-12!73;UBERON:0005743!3.42e-12!73;UBERON:0000073!8.05e-12!75;UBERON:0001016!8.05e-12!75;UBERON:0001049!4.91e-11!52;UBERON:0005068!4.91e-11!52;UBERON:0006241!4.91e-11!52;UBERON:0007135!4.91e-11!52;UBERON:0000955!1.84e-10!50;UBERON:0006238!1.84e-10!50;UBERON:0000033!2.02e-10!63;UBERON:0002616!2.39e-10!49;UBERON:0007811!9.14e-10!86;UBERON:0000153!4.23e-09!94;UBERON:0002346!9.92e-09!71;UBERON:0003075!9.92e-09!71;UBERON:0007284!9.92e-09!71;UBERON:0004121!9.62e-08!102;UBERON:0000924!9.62e-08!102;UBERON:0006601!9.62e-08!102;UBERON:0003056!9.81e-08!49;UBERON:0002780!1.05e-07!39;UBERON:0001890!1.05e-07!39;UBERON:0006240!1.05e-07!39;UBERON:0002020!1.35e-07!34;UBERON:0003080!1.54e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.13e-12,54;UBERON:0001017,3.72e-12,73;UBERON:0001016,8.73e-12,75;UBERON:0001049,4.87e-11,52;UBERON:0005068,4.87e-11,52;UBERON:0006241,4.87e-11,52;UBERON:0007135,4.87e-11,52;UBERON:0002346,9.56e-11,64;UBERON:0003075,9.56e-11,64;UBERON:0007284,9.56e-11,64;UBERON:0000955,1.17e-09,47;UBERON:0006238,1.17e-09,47;UBERON:0002616,1.52e-09,46;UBERON:0004121,3.80e-09,95;UBERON:0000924,3.80e-09,95;UBERON:0006601,3.80e-09,95;UBERON:0010371,2.78e-08,73;UBERON:0003056,9.76e-08,49;UBERON:0002780,1.05e-07,39;UBERON:0001890,1.05e-07,39;UBERON:0006240,1.05e-07,39;UBERON:0002020,1.34e-07,34;UBERON:0003080,1.53e-07,40 | |||
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| ||
|short_description=p1@1700037C18Rik | |short_description=p1@1700037C18Rik | ||
}} | }} |
Revision as of 23:35, 13 November 2012
Short description: | p1@1700037C18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1700037C18Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENSMUST00000115859, NM_028484, uc007xyz.1_5end |
EntrezGene: | 1700037C18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.08e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.08e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.13e-12 | 54 |
central nervous system | 3.72e-12 | 73 |
nervous system | 8.73e-12 | 75 |
neural tube | 4.87e-11 | 52 |
neural rod | 4.87e-11 | 52 |
future spinal cord | 4.87e-11 | 52 |
neural keel | 4.87e-11 | 52 |
neurectoderm | 9.56e-11 | 64 |
neural plate | 9.56e-11 | 64 |
presumptive neural plate | 9.56e-11 | 64 |
brain | 1.17e-09 | 47 |
future brain | 1.17e-09 | 47 |
regional part of brain | 1.52e-09 | 46 |
ectoderm-derived structure | 3.80e-09 | 95 |
ectoderm | 3.80e-09 | 95 |
presumptive ectoderm | 3.80e-09 | 95 |
ecto-epithelium | 2.78e-08 | 73 |
pre-chordal neural plate | 9.76e-08 | 49 |
regional part of forebrain | 1.05e-07 | 39 |
forebrain | 1.05e-07 | 39 |
future forebrain | 1.05e-07 | 39 |
gray matter | 1.34e-07 | 34 |
anterior neural tube | 1.53e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.