FFCP PHASE1:Mm9::chr5:31598235..31598315,-: Difference between revisions
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|id=chr5:31598235..31598315,- | |id=chr5:31598235..31598315,- | ||
|ontology_enrichment_celltype=CL:0000221!2.32e-16!44;CL:0000133!2.32e-16!44;CL:0002319!4.65e-16!43;CL:0000540!8.43e-16!33;CL:0000047!8.43e-16!33;CL:0000031!8.43e-16!33;CL:0000404!8.43e-16!33;CL:0000117!5.81e-15!23;CL:0000337!5.81e-15!23;CL:0000055!6.45e-14!50;CL:0000393!4.65e-13!39;CL:0000211!4.65e-13!39 | |ontology_enrichment_celltype=CL:0000221!2.32e-16!44;CL:0000133!2.32e-16!44;CL:0002319!4.65e-16!43;CL:0000540!8.43e-16!33;CL:0000047!8.43e-16!33;CL:0000031!8.43e-16!33;CL:0000404!8.43e-16!33;CL:0000117!5.81e-15!23;CL:0000337!5.81e-15!23;CL:0000055!6.45e-14!50;CL:0000393!4.65e-13!39;CL:0000211!4.65e-13!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.76e-16,44;CL:0000133,1.76e-16,44;CL:0002319,3.55e-16,43;CL:0000540,6.46e-16,33;CL:0000047,6.46e-16,33;CL:0000031,6.46e-16,33;CL:0000404,6.46e-16,33;CL:0000117,4.52e-15,23;CL:0000337,4.52e-15,23;CL:0000393,3.75e-13,39;CL:0000211,3.75e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.54e-32!73;UBERON:0005743!9.54e-32!73;UBERON:0000073!1.40e-30!75;UBERON:0001016!1.40e-30!75;UBERON:0004121!6.86e-26!102;UBERON:0000924!6.86e-26!102;UBERON:0006601!6.86e-26!102;UBERON:0001049!5.14e-24!52;UBERON:0005068!5.14e-24!52;UBERON:0006241!5.14e-24!52;UBERON:0007135!5.14e-24!52;UBERON:0002346!6.46e-24!71;UBERON:0003075!6.46e-24!71;UBERON:0007284!6.46e-24!71;UBERON:0000033!8.92e-23!63;UBERON:0000955!3.31e-22!50;UBERON:0006238!3.31e-22!50;UBERON:0002616!8.63e-22!49;UBERON:0002020!1.06e-18!34;UBERON:0003056!4.01e-18!49;UBERON:0003080!9.10e-17!40;UBERON:0002780!3.54e-16!39;UBERON:0001890!3.54e-16!39;UBERON:0006240!3.54e-16!39;UBERON:0002791!3.64e-15!29;UBERON:0003528!3.64e-15!29;UBERON:0001893!3.64e-15!29;UBERON:0000025!4.23e-14!114;UBERON:0004111!6.91e-13!122;UBERON:0000956!4.09e-11!21;UBERON:0001869!4.09e-11!21;UBERON:0000203!4.09e-11!21;UBERON:0000468!4.17e-10!333;UBERON:0000153!5.59e-10!94;UBERON:0002619!6.70e-09!17;UBERON:0007811!1.86e-08!86;UBERON:0003076!6.00e-08!12;UBERON:0003057!6.00e-08!12;UBERON:0000922!6.33e-08!328 | |ontology_enrichment_uberon=UBERON:0001017!9.54e-32!73;UBERON:0005743!9.54e-32!73;UBERON:0000073!1.40e-30!75;UBERON:0001016!1.40e-30!75;UBERON:0004121!6.86e-26!102;UBERON:0000924!6.86e-26!102;UBERON:0006601!6.86e-26!102;UBERON:0001049!5.14e-24!52;UBERON:0005068!5.14e-24!52;UBERON:0006241!5.14e-24!52;UBERON:0007135!5.14e-24!52;UBERON:0002346!6.46e-24!71;UBERON:0003075!6.46e-24!71;UBERON:0007284!6.46e-24!71;UBERON:0000033!8.92e-23!63;UBERON:0000955!3.31e-22!50;UBERON:0006238!3.31e-22!50;UBERON:0002616!8.63e-22!49;UBERON:0002020!1.06e-18!34;UBERON:0003056!4.01e-18!49;UBERON:0003080!9.10e-17!40;UBERON:0002780!3.54e-16!39;UBERON:0001890!3.54e-16!39;UBERON:0006240!3.54e-16!39;UBERON:0002791!3.64e-15!29;UBERON:0003528!3.64e-15!29;UBERON:0001893!3.64e-15!29;UBERON:0000025!4.23e-14!114;UBERON:0004111!6.91e-13!122;UBERON:0000956!4.09e-11!21;UBERON:0001869!4.09e-11!21;UBERON:0000203!4.09e-11!21;UBERON:0000468!4.17e-10!333;UBERON:0000153!5.59e-10!94;UBERON:0002619!6.70e-09!17;UBERON:0007811!1.86e-08!86;UBERON:0003076!6.00e-08!12;UBERON:0003057!6.00e-08!12;UBERON:0000922!6.33e-08!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.41e-32,73;UBERON:0001016,8.13e-31,75;UBERON:0004121,9.49e-28,95;UBERON:0000924,9.49e-28,95;UBERON:0006601,9.49e-28,95;UBERON:0002346,1.47e-26,64;UBERON:0003075,1.47e-26,64;UBERON:0007284,1.47e-26,64;UBERON:0000073,1.04e-25,54;UBERON:0001049,3.38e-24,52;UBERON:0005068,3.38e-24,52;UBERON:0006241,3.38e-24,52;UBERON:0007135,3.38e-24,52;UBERON:0010371,1.33e-23,73;UBERON:0000955,3.38e-20,47;UBERON:0006238,3.38e-20,47;UBERON:0002616,8.69e-20,46;UBERON:0002020,7.70e-19,34;UBERON:0003056,2.94e-18,49;UBERON:0010314,3.23e-18,92;UBERON:0003080,6.85e-17,40;UBERON:0002780,2.69e-16,39;UBERON:0001890,2.69e-16,39;UBERON:0006240,2.69e-16,39;UBERON:0003528,2.82e-15,29;UBERON:0002791,2.82e-15,29;UBERON:0001893,2.82e-15,29;UBERON:0000025,4.14e-14,114;UBERON:0004111,6.82e-13,122;UBERON:0000956,3.42e-11,21;UBERON:0001869,3.42e-11,21;UBERON:0000203,3.42e-11,21;UBERON:0000922,5.13e-09,320;UBERON:0002619,5.84e-09,17;UBERON:0003076,5.32e-08,12;UBERON:0003057,5.32e-08,12 | |||
|phase1_expression=25.1433689954527,0,0,0,0,0,0,0,0,0.468129052643987,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,13.7770130044733,0.198581902401771,0.522399578277871,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,12.3378881616066,13.8886395770735,13.0318194034794,37.5547845287059,17.6600376668162,23.286735369854,17.1098311185369,14.1386285841616,31.6255641602937,0.167782606057736,1.45072428402269,0.336093799142464,2.82985379639542,5.15760191889762,1.54701627683233,56.2439761189682,66.6528633882761,58.9463205260747,10.8430250262122,8.89294796111139,0,0.988866362566974,0,22.4700082888804,31.5059010363675,51.222668480388,55.6224465926566,57.4187144489273,92.8365699312362,84.592651184468,39.8095097448601,35.6545152187839,42.284064184061,64.9683697896393,80.0599609794127,70.1981856981033,55.2603545589512,46.2927476628193,46.3612899795516,71.7500307433549,48.9603470727562,45.5338778374894,77.1926893941009,65.9180882099847,62.2574149056504,3.55913108665965,5.66786700800891,5.2175607966302,18.9293252935905,28.5587960157255,33.4615978815447,31.8390444549358,17.0250217096988,10.5333315098814,0,0.259786004602869,0,25.2109721400258,0,2.54805239706646,0,2.81438353314578,4.30711771307668,3.53867111510348,14.5013527243206,0.258937883647172,5.78924342352817,17.5220180033797,10.6562917409249,5.5347719341454,5.57673770044703,7.4080885495494,5.52933001850572,2.71914464507811,1.59059292611903,2.65383165584962,15.5296175949513,5.30019644304944,3.87900202508178,1.86391761218122,38.3542844085127,58.2261844941405,0.510914110417183,0,0,0,52.1271425128783,28.8225379775735,37.8219599859722,45.889620530761,48.5859368927628,57.7650763875577,51.9172041816824,24.5432866879262,3.11017426525233,0.505445516867349,8.62811609134543,28.2361361229067,33.7956093517205,20.7071449276152,19.591626318643,20.342913246247,20.7544226861457,20.5206776785806,20.4375662883822,26.9459991166053,30.4460789070189,32.1990557220026,35.7289043856947,33.6437171562973,20.5468778248078,22.4302528684658,29.457071489137,0,0,0,13.0489236697366,12.195355119017,13.5046546095761,12.5474709860161,9.05115466038058,6.32495162838251,6.74348439776183,8.85302224618743,4.55384835231961,7.24063339619314,5.08919138645195,2.67527071501324,3.36259971078264,2.85415149878366,4.2946054003319,35.3287113587734,50.1145462287115,0,0.264450566663544,23.8882840599462,29.0295839825548,16.1084326652617,10.2858597557905,6.44896327150124,6.84812254005213,0.474529061544512,4.94096864172033,5.27803938480566,4.17808591286417,2.9244613067868,0.898819408654221,2.16138049874694,0.597423819763102,22.5704802134167,14.8523066392647,9.01661885384643,13.0336849821001,12.8008641530633,10.3099655238768,6.9560190836683,3.24742325555125,2.19798218977925,2.71473760627961,39.4281994025908,5.5058884886311,5.70021085828289,2.9232074610031,2.63718157805054,6.99413763282009,4.58326533206556,4.60313819921297,1.78348749452539,7.68771956926628,7.18841032636773,11.1642284300551,17.78614736753,30.3094653536534,22.7834715172828,16.4030797263545,3.51031061316549,34.2979455304577,25.422536324956,21.2181357218985,19.9486711045227,9.21284415929987,5.95109102215034,7.02481132288076,9.93101407869003,13.2878813789265,10.8429242687091,3.4411296090305,3.9717545829156,4.19482269886384,0,0,1.47529281905711,1.93155722413313,58.9220665255196,52.1592005335304,12.131185957874,3.28212205365685,20.8235424814729,25.3785183792815,23.4811503528751,19.8344102300618,16.0415045339324,20.3815102167959,20.6453457854196,18.9966307642353,17.7879500075936,32.7747742750243,9.79386587937053,36.5034487517873,23.6186091062685,18.806594018869,1.32745138339963,15.0523994416088,17.5347663039556,6.22396763194464,10.0402643579463,7.07100840271033,4.13485269069154,9.81541069589265,5.70395805415554,0.632073515871632,3.16255825724996,3.09406629744561,12.5962654128902,19.9867814374754,22.7671283457648,20.1476812929697,15.4286003268778,20.155676389034,17.9358432456312,11.5696680663548,3.98941903708308,9.95610733059955,3.30792597082443,3.2977250588296,9.04200789497071,9.16756458907969,8.11731939221328,5.58079059133208,1.1659233465194,70.0907641599727,0.683483523191411,16.3045625690946,8.33375373163703,1.13021074202815,0.820165366326151,0.915112692826091,0.849892149969277,0.559805809294632,0.414599921413271,2.86401185404534,27.0467274511871,17.8921131071627,14.4727156701214,10.245326504709,9.60795280483181,12.4075198674035,8.5133059397096,4.4498510137285,0.648074866458964,1.86401793926078,0.56369293868419,19.5866675317612,34.7462829959905,45.8904804491952,40.2978649250521,29.2294097099046,14.2002258761362,12.7600297147071,5.24296722128554,1.44950472495604,1.15212002503146,0,13.582589424441,9.65482997349376,2.7283372825337,1.9692936523423,1.39076948346885,0.600977247599844,0,0.201932899896295,0.304827226619999,0.302478555410522,0.0974578807397524,0.481059208201647,0.233753804363138,2.49403421976732,3.10780334723691,2.15313255862742,1.67884616364078,2.31827512838629,4.129014459926,11.1722490803032,2.14368379079066,5.517293144389,49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|short_description=p1@Fndc4 | |short_description=p1@Fndc4 | ||
}} | }} |
Revision as of 22:31, 13 November 2012
Short description: | p1@Fndc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fndc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000041266, ENSMUST00000172435, NM_022424, uc008wyd.1, uc008wye.1_5end |
EntrezGene: | Fndc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.76e-16 | 44 |
neurectodermal cell | 1.76e-16 | 44 |
neural cell | 3.55e-16 | 43 |
neuron | 6.46e-16 | 33 |
neuronal stem cell | 6.46e-16 | 33 |
neuroblast | 6.46e-16 | 33 |
electrically signaling cell | 6.46e-16 | 33 |
CNS neuron (sensu Vertebrata) | 4.52e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.52e-15 | 23 |
electrically responsive cell | 3.75e-13 | 39 |
electrically active cell | 3.75e-13 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.