FFCP PHASE1:Mm9::chr1:20880643..20880668,+: Difference between revisions
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|id=chr1:20880643..20880668,+ | |id=chr1:20880643..20880668,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.83e-16!44;CL:0000133!1.83e-16!44;CL:0002319!3.71e-16!43;CL:0000055!5.01e-15!50;CL:0000540!1.68e-13!33;CL:0000047!1.68e-13!33;CL:0000031!1.68e-13!33;CL:0000404!1.68e-13!33;CL:0000393!8.18e-13!39;CL:0000211!8.18e-13!39;CL:0000117!9.11e-11!23;CL:0000337!9.11e-11!23;CL:0002321!1.31e-09!70;CL:0000220!1.31e-09!70 | |ontology_enrichment_celltype=CL:0000221!1.83e-16!44;CL:0000133!1.83e-16!44;CL:0002319!3.71e-16!43;CL:0000055!5.01e-15!50;CL:0000540!1.68e-13!33;CL:0000047!1.68e-13!33;CL:0000031!1.68e-13!33;CL:0000404!1.68e-13!33;CL:0000393!8.18e-13!39;CL:0000211!8.18e-13!39;CL:0000117!9.11e-11!23;CL:0000337!9.11e-11!23;CL:0002321!1.31e-09!70;CL:0000220!1.31e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.84e-16,44;CL:0000133,1.84e-16,44;CL:0002319,3.76e-16,43;CL:0000540,1.32e-13,33;CL:0000047,1.32e-13,33;CL:0000031,1.32e-13,33;CL:0000404,1.32e-13,33;CL:0000393,6.52e-13,39;CL:0000211,6.52e-13,39;CL:0000117,7.57e-11,23;CL:0000337,7.57e-11,23;CL:0002321,6.22e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.81e-31!75;UBERON:0001016!5.81e-31!75;UBERON:0001017!6.00e-31!73;UBERON:0005743!6.00e-31!73;UBERON:0004121!6.34e-29!102;UBERON:0000924!6.34e-29!102;UBERON:0006601!6.34e-29!102;UBERON:0002346!8.25e-22!71;UBERON:0003075!8.25e-22!71;UBERON:0007284!8.25e-22!71;UBERON:0001049!5.49e-21!52;UBERON:0005068!5.49e-21!52;UBERON:0006241!5.49e-21!52;UBERON:0007135!5.49e-21!52;UBERON:0000955!5.64e-20!50;UBERON:0006238!5.64e-20!50;UBERON:0002616!2.23e-19!49;UBERON:0002020!1.30e-16!34;UBERON:0000033!4.21e-16!63;UBERON:0003080!6.69e-15!40;UBERON:0002780!2.89e-14!39;UBERON:0001890!2.89e-14!39;UBERON:0006240!2.89e-14!39;UBERON:0002791!1.05e-13!29;UBERON:0003528!1.05e-13!29;UBERON:0001893!1.05e-13!29;UBERON:0003056!2.58e-12!49;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0002619!2.28e-08!17;UBERON:0007811!1.53e-07!86;UBERON:0000153!2.94e-07!94;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!5.81e-31!75;UBERON:0001016!5.81e-31!75;UBERON:0001017!6.00e-31!73;UBERON:0005743!6.00e-31!73;UBERON:0004121!6.34e-29!102;UBERON:0000924!6.34e-29!102;UBERON:0006601!6.34e-29!102;UBERON:0002346!8.25e-22!71;UBERON:0003075!8.25e-22!71;UBERON:0007284!8.25e-22!71;UBERON:0001049!5.49e-21!52;UBERON:0005068!5.49e-21!52;UBERON:0006241!5.49e-21!52;UBERON:0007135!5.49e-21!52;UBERON:0000955!5.64e-20!50;UBERON:0006238!5.64e-20!50;UBERON:0002616!2.23e-19!49;UBERON:0002020!1.30e-16!34;UBERON:0000033!4.21e-16!63;UBERON:0003080!6.69e-15!40;UBERON:0002780!2.89e-14!39;UBERON:0001890!2.89e-14!39;UBERON:0006240!2.89e-14!39;UBERON:0002791!1.05e-13!29;UBERON:0003528!1.05e-13!29;UBERON:0001893!1.05e-13!29;UBERON:0003056!2.58e-12!49;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0002619!2.28e-08!17;UBERON:0007811!1.53e-07!86;UBERON:0000153!2.94e-07!94;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.53e-31,75;UBERON:0001017,4.70e-31,73;UBERON:0004121,5.91e-26,95;UBERON:0000924,5.91e-26,95;UBERON:0006601,5.91e-26,95;UBERON:0000073,1.72e-22,54;UBERON:0001049,5.15e-21,52;UBERON:0005068,5.15e-21,52;UBERON:0006241,5.15e-21,52;UBERON:0007135,5.15e-21,52;UBERON:0002346,4.83e-19,64;UBERON:0003075,4.83e-19,64;UBERON:0007284,4.83e-19,64;UBERON:0010371,2.48e-18,73;UBERON:0000955,7.58e-18,47;UBERON:0006238,7.58e-18,47;UBERON:0002616,2.92e-17,46;UBERON:0002020,9.59e-17,34;UBERON:0010314,4.70e-15,92;UBERON:0003080,5.11e-15,40;UBERON:0002780,2.24e-14,39;UBERON:0001890,2.24e-14,39;UBERON:0006240,2.24e-14,39;UBERON:0003528,8.21e-14,29;UBERON:0002791,8.21e-14,29;UBERON:0001893,8.21e-14,29;UBERON:0003056,2.08e-12,49;UBERON:0000956,1.09e-09,21;UBERON:0001869,1.09e-09,21;UBERON:0000203,1.09e-09,21;UBERON:0002619,1.99e-08,17;UBERON:0003076,8.89e-07,12;UBERON:0003057,8.89e-07,12 | |||
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| ||
|short_description=p2@Paqr8 | |short_description=p2@Paqr8 | ||
}} | }} |
Revision as of 21:48, 13 November 2012
Short description: | p2@Paqr8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Paqr8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -22bp_to_ENSMUST00000163700_5end |
EntrezGene: | Paqr8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.84e-16 | 44 |
neurectodermal cell | 1.84e-16 | 44 |
neural cell | 3.76e-16 | 43 |
neuron | 1.32e-13 | 33 |
neuronal stem cell | 1.32e-13 | 33 |
neuroblast | 1.32e-13 | 33 |
electrically signaling cell | 1.32e-13 | 33 |
electrically responsive cell | 6.52e-13 | 39 |
electrically active cell | 6.52e-13 | 39 |
CNS neuron (sensu Vertebrata) | 7.57e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.57e-11 | 23 |
embryonic cell | 6.22e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.53e-31 | 75 |
central nervous system | 4.70e-31 | 73 |
ectoderm-derived structure | 5.91e-26 | 95 |
ectoderm | 5.91e-26 | 95 |
presumptive ectoderm | 5.91e-26 | 95 |
regional part of nervous system | 1.72e-22 | 54 |
neural tube | 5.15e-21 | 52 |
neural rod | 5.15e-21 | 52 |
future spinal cord | 5.15e-21 | 52 |
neural keel | 5.15e-21 | 52 |
neurectoderm | 4.83e-19 | 64 |
neural plate | 4.83e-19 | 64 |
presumptive neural plate | 4.83e-19 | 64 |
ecto-epithelium | 2.48e-18 | 73 |
brain | 7.58e-18 | 47 |
future brain | 7.58e-18 | 47 |
regional part of brain | 2.92e-17 | 46 |
gray matter | 9.59e-17 | 34 |
structure with developmental contribution from neural crest | 4.70e-15 | 92 |
anterior neural tube | 5.11e-15 | 40 |
regional part of forebrain | 2.24e-14 | 39 |
forebrain | 2.24e-14 | 39 |
future forebrain | 2.24e-14 | 39 |
brain grey matter | 8.21e-14 | 29 |
regional part of telencephalon | 8.21e-14 | 29 |
telencephalon | 8.21e-14 | 29 |
pre-chordal neural plate | 2.08e-12 | 49 |
cerebral cortex | 1.09e-09 | 21 |
cerebral hemisphere | 1.09e-09 | 21 |
pallium | 1.09e-09 | 21 |
regional part of cerebral cortex | 1.99e-08 | 17 |
posterior neural tube | 8.89e-07 | 12 |
chordal neural plate | 8.89e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.