FFCP PHASE1:Mm9::chr8:26864824..26864896,-: Difference between revisions
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|id=chr8:26864824..26864896,- | |id=chr8:26864824..26864896,- | ||
|ontology_enrichment_celltype=CL:0000393!3.22e-09!39;CL:0000211!3.22e-09!39;CL:0000540!3.31e-08!33;CL:0000047!3.31e-08!33;CL:0000031!3.31e-08!33;CL:0000404!3.31e-08!33;CL:0000117!1.57e-07!23;CL:0000337!1.57e-07!23 | |ontology_enrichment_celltype=CL:0000393!3.22e-09!39;CL:0000211!3.22e-09!39;CL:0000540!3.31e-08!33;CL:0000047!3.31e-08!33;CL:0000031!3.31e-08!33;CL:0000404!3.31e-08!33;CL:0000117!1.57e-07!23;CL:0000337!1.57e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.22e-09,39;CL:0000211,3.22e-09,39;CL:0000540,3.31e-08,33;CL:0000047,3.31e-08,33;CL:0000031,3.31e-08,33;CL:0000404,3.31e-08,33;CL:0000117,1.57e-07,23;CL:0000337,1.57e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.54e-13!73;UBERON:0005743!9.54e-13!73;UBERON:0000073!2.23e-12!75;UBERON:0001016!2.23e-12!75;UBERON:0002346!2.75e-11!71;UBERON:0003075!2.75e-11!71;UBERON:0007284!2.75e-11!71;UBERON:0001049!5.41e-11!52;UBERON:0005068!5.41e-11!52;UBERON:0006241!5.41e-11!52;UBERON:0007135!5.41e-11!52;UBERON:0000955!8.02e-11!50;UBERON:0006238!8.02e-11!50;UBERON:0004121!1.04e-10!102;UBERON:0000924!1.04e-10!102;UBERON:0006601!1.04e-10!102;UBERON:0000033!1.34e-10!63;UBERON:0002616!1.97e-10!49;UBERON:0002020!2.79e-10!34;UBERON:0003056!1.19e-08!49;UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0003080!3.64e-08!40;UBERON:0002780!1.05e-07!39;UBERON:0001890!1.05e-07!39;UBERON:0006240!1.05e-07!39 | |ontology_enrichment_uberon=UBERON:0001017!9.54e-13!73;UBERON:0005743!9.54e-13!73;UBERON:0000073!2.23e-12!75;UBERON:0001016!2.23e-12!75;UBERON:0002346!2.75e-11!71;UBERON:0003075!2.75e-11!71;UBERON:0007284!2.75e-11!71;UBERON:0001049!5.41e-11!52;UBERON:0005068!5.41e-11!52;UBERON:0006241!5.41e-11!52;UBERON:0007135!5.41e-11!52;UBERON:0000955!8.02e-11!50;UBERON:0006238!8.02e-11!50;UBERON:0004121!1.04e-10!102;UBERON:0000924!1.04e-10!102;UBERON:0006601!1.04e-10!102;UBERON:0000033!1.34e-10!63;UBERON:0002616!1.97e-10!49;UBERON:0002020!2.79e-10!34;UBERON:0003056!1.19e-08!49;UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0003080!3.64e-08!40;UBERON:0002780!1.05e-07!39;UBERON:0001890!1.05e-07!39;UBERON:0006240!1.05e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.54e-13,73;UBERON:0001016,2.23e-12,75;UBERON:0000073,3.30e-12,54;UBERON:0002346,4.99e-12,64;UBERON:0003075,4.99e-12,64;UBERON:0007284,4.99e-12,64;UBERON:0010371,3.28e-11,73;UBERON:0004121,4.44e-11,95;UBERON:0000924,4.44e-11,95;UBERON:0006601,4.44e-11,95;UBERON:0001049,5.41e-11,52;UBERON:0005068,5.41e-11,52;UBERON:0006241,5.41e-11,52;UBERON:0007135,5.41e-11,52;UBERON:0002020,2.79e-10,34;UBERON:0000955,3.17e-09,47;UBERON:0006238,3.17e-09,47;UBERON:0002616,7.48e-09,46;UBERON:0003056,1.19e-08,49;UBERON:0010314,1.33e-08,92;UBERON:0003528,1.57e-08,29;UBERON:0002791,1.57e-08,29;UBERON:0001893,1.57e-08,29;UBERON:0003080,3.64e-08,40;UBERON:0002780,1.05e-07,39;UBERON:0001890,1.05e-07,39;UBERON:0006240,1.05e-07,39 | |||
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| ||
|short_description=p1@Ddhd2 | |short_description=p1@Ddhd2 | ||
}} | }} |
Revision as of 20:42, 13 November 2012
Short description: | p1@Ddhd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ddhd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:493 |
Association with transcript: | 0bp_to_uc009lgw.2_5end |
EntrezGene: | Ddhd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.22e-09 | 39 |
electrically active cell | 3.22e-09 | 39 |
neuron | 3.31e-08 | 33 |
neuronal stem cell | 3.31e-08 | 33 |
neuroblast | 3.31e-08 | 33 |
electrically signaling cell | 3.31e-08 | 33 |
CNS neuron (sensu Vertebrata) | 1.57e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.57e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.54e-13 | 73 |
nervous system | 2.23e-12 | 75 |
regional part of nervous system | 3.30e-12 | 54 |
neurectoderm | 4.99e-12 | 64 |
neural plate | 4.99e-12 | 64 |
presumptive neural plate | 4.99e-12 | 64 |
ecto-epithelium | 3.28e-11 | 73 |
ectoderm-derived structure | 4.44e-11 | 95 |
ectoderm | 4.44e-11 | 95 |
presumptive ectoderm | 4.44e-11 | 95 |
neural tube | 5.41e-11 | 52 |
neural rod | 5.41e-11 | 52 |
future spinal cord | 5.41e-11 | 52 |
neural keel | 5.41e-11 | 52 |
gray matter | 2.79e-10 | 34 |
brain | 3.17e-09 | 47 |
future brain | 3.17e-09 | 47 |
regional part of brain | 7.48e-09 | 46 |
pre-chordal neural plate | 1.19e-08 | 49 |
structure with developmental contribution from neural crest | 1.33e-08 | 92 |
brain grey matter | 1.57e-08 | 29 |
regional part of telencephalon | 1.57e-08 | 29 |
telencephalon | 1.57e-08 | 29 |
anterior neural tube | 3.64e-08 | 40 |
regional part of forebrain | 1.05e-07 | 39 |
forebrain | 1.05e-07 | 39 |
future forebrain | 1.05e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.