FFCP PHASE1:Mm9::chr19:6401675..6401715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr19:6401675..6401715,+ | |id=chr19:6401675..6401715,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!9.84e-19!66;UBERON:0005172!2.20e-16!49;UBERON:0005173!2.20e-16!49;UBERON:0002417!2.20e-16!49;UBERON:0000916!2.20e-16!49;UBERON:0005177!1.65e-15!85;UBERON:0000926!2.56e-13!193;UBERON:0004120!2.56e-13!193;UBERON:0006603!2.56e-13!193;UBERON:0002100!4.09e-13!98;UBERON:0000466!5.50e-12!79;UBERON:0002107!1.61e-10!22;UBERON:0007499!1.61e-10!22;UBERON:0006925!1.61e-10!22;UBERON:0009497!1.61e-10!22;UBERON:0000015!1.61e-10!22;UBERON:0002423!1.61e-10!22;UBERON:0006235!1.61e-10!22;UBERON:0008835!1.61e-10!22;UBERON:0003894!1.61e-10!22;UBERON:0004161!1.61e-10!22;UBERON:0008836!1.61e-10!22;UBERON:0009854!2.63e-09!23;UBERON:0009856!2.63e-09!23;UBERON:0002365!8.72e-09!25;UBERON:0002330!8.72e-09!25;UBERON:0003104!6.68e-08!131;UBERON:0009142!6.68e-08!131;UBERON:0003914!4.86e-07!47;UBERON:0005256!9.42e-07!47 | |ontology_enrichment_uberon=UBERON:0009569!9.84e-19!66;UBERON:0005172!2.20e-16!49;UBERON:0005173!2.20e-16!49;UBERON:0002417!2.20e-16!49;UBERON:0000916!2.20e-16!49;UBERON:0005177!1.65e-15!85;UBERON:0000926!2.56e-13!193;UBERON:0004120!2.56e-13!193;UBERON:0006603!2.56e-13!193;UBERON:0002100!4.09e-13!98;UBERON:0000466!5.50e-12!79;UBERON:0002107!1.61e-10!22;UBERON:0007499!1.61e-10!22;UBERON:0006925!1.61e-10!22;UBERON:0009497!1.61e-10!22;UBERON:0000015!1.61e-10!22;UBERON:0002423!1.61e-10!22;UBERON:0006235!1.61e-10!22;UBERON:0008835!1.61e-10!22;UBERON:0003894!1.61e-10!22;UBERON:0004161!1.61e-10!22;UBERON:0008836!1.61e-10!22;UBERON:0009854!2.63e-09!23;UBERON:0009856!2.63e-09!23;UBERON:0002365!8.72e-09!25;UBERON:0002330!8.72e-09!25;UBERON:0003104!6.68e-08!131;UBERON:0009142!6.68e-08!131;UBERON:0003914!4.86e-07!47;UBERON:0005256!9.42e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,6.50e-20,66;UBERON:0005177,2.41e-18,79;UBERON:0002100,7.34e-17,90;UBERON:0005172,7.74e-17,49;UBERON:0005173,7.74e-17,49;UBERON:0002417,7.74e-17,49;UBERON:0000916,7.74e-17,49;UBERON:0003104,3.72e-11,61;UBERON:0009142,3.72e-11,61;UBERON:0002107,6.49e-11,22;UBERON:0007499,6.49e-11,22;UBERON:0006925,6.49e-11,22;UBERON:0009497,6.49e-11,22;UBERON:0000015,6.49e-11,22;UBERON:0002423,6.49e-11,22;UBERON:0006235,6.49e-11,22;UBERON:0008835,6.49e-11,22;UBERON:0003894,6.49e-11,22;UBERON:0004161,6.49e-11,22;UBERON:0008836,6.49e-11,22;UBERON:0009854,7.24e-10,23;UBERON:0009856,7.24e-10,23;UBERON:0002365,2.62e-09,25;UBERON:0002330,2.62e-09,25;UBERON:0005256,5.27e-08,45;UBERON:0003914,2.37e-07,47 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0.513602189793617,0.262261207256992,7.32841475994458,6.07425802169478,3.49780939064073,2.68142840554502,3.97631857456642,2.97072756258621,2.63634199468316,0.198581902401771,0,0,0.91763712426868,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,19.0509202037889,25.2176562909674,0,0,0,0,17.5783284909501,21.0960543021426,22.5115209908733,17.0587131528994,14.3439551841274,15.0508209439658,0.377690453926732,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0.838913030288682,0,1.00828139742739,2.31533492432352,3.72493471920384,1.03134418455488,0.404632921719196,0.528990979272033,0,0,0,4.94944844504769,2.96659908770092,4.9733608046227,2.69640099466564,2.30530983192933,0.311068836925433,0.270011876663381,0,1.71390590642282,1.76694832761291,0.122490799214954,0.862609239164127,0,1.10115880999389,1.0214987046815,0.921639199537461,0.131886287730194,0.0914876436024097,0,2.79182999001381,1.68828783009504,0.916789486660861,1.47314292736834,1.42371680799103,0.559198337475902,0.075726193333184,0.151143120213571,12.1743085254705,24.0918685554788,1.3599426674155,2.15881276655127,11.0461990966104,4.03224198387602,3.7919993435573,0,0,0,0,0,0,0,0,0,0,3.53970027129086,5.43769555659061,2.22663208597237,2.08182392119363,4.56698217468212,4.61230994512117,5.87818298155228,5.64425794251383,2.76466500925286,6.42706916109372,1.3013942122792,22.9998743506967,3.07357014900077,4.63767188766826,3.87900202508178,0,0.585561594023094,0.628340120440365,0.766371165625774,9.94465533399138,25.1959147017231,16.5191295194984,2.99581278809645,5.03250663100489,0.376963056338593,0.869121600961382,0.767146371990992,0.62336413367868,1.78465389374533,3.66621709861139,10.698999472468,0.505445516867349,0.631325567659422,0.650602214813519,0.919608417733892,0.360124259610698,1.65775299619287,0.680364991513279,0.2562274405697,0.655912071918102,0.517406741478031,1.07783996466421,0.378212160335639,0.351902248327898,0.876782929710299,1.11218899690239,2.43776516565517,1.4404749548556,1.59227413454795,32.3018066164088,37.058098624519,30.4054944353284,2.27838349789052,2.34526059981096,1.62055855314913,2.3674473558521,1.18058539048442,1.54267112887378,2.55787339225449,1.87791380979733,4.55384835231961,2.13927804887525,4.92502392237286,2.35099547682982,2.63159977365598,3.29325172936576,4.2946054003319,0.210289948564127,0.514523061896422,0,1.32225283331772,1.70630600428187,1.62565670302307,1.15980715189884,1.21010114774006,2.89091456998331,2.28270751335071,0.474529061544512,1.97638745668813,2.5133520880027,2.98434708061726,2.9244613067868,1.79763881730844,0.864552199498777,0.995706366271836,2.46568271239006,3.65595240351132,5.63538678365402,4.88763186828754,5.62462212786115,6.59276706968994,9.99137286563265,5.46157547524528,5.02395929092399,6.04646103216823,8.30067355844017,7.17433954579204,10.0245087507734,11.2431056192427,14.4030686185837,14.470629585145,9.16653066413111,11.2201493605816,12.1601420081277,15.1008777253445,11.5014565221884,16.7463426450827,8.7370548472077,9.09283960609602,8.43167843552987,10.1313139486307,7.39012760666419,2.08440552947533,1.79261474086228,2.71592137240301,4.92849521405854,9.71536293162531,14.7587057349329,12.0982861671835,10.8768249433272,11.2946991720875,13.8725648732014,9.83179888294428,9.15230403889247,9.69148692496127,0,1.63171705145613,1.47529281905711,2.48343071674259,0.80275294993896,0.703270119553219,0,4.79694761688309,0.315508219416257,0,0,0,0,0.283076530788832,0.404810701674894,0,0,2.57057053137446,2.55492153374884,3.38324646967785,2.76907830901079,2.63952196756057,2.65490276679926,2.42780636154981,1.51161778482376,4.52652191414155,2.06711325016541,3.07435147943927,2.84271122485043,3.63533729477506,2.49548164869305,2.52829406348653,0,1.03135543248187,1.36175842301515,1.26042765821917,0.905510786479282,2.35770738534752,0.532020700926821,1.60531935841864,1.48094118541909,2.43571959291679,0.704015124191131,3.1774810629573,0.441056796109924,2.4732937941222,2.26050197374268,2.17126529741361,2.26807453605959,1.14898629821543,2.91480836629851,0.556275906031529,9.56876932467975,7.42992724667601,13.3340059706192,10.5486335922627,5.19438065339896,7.32090154260872,1.5298058699447,2.93898049879682,3.04039942369732,0.954670618015114,0.949007980743406,1.62655573701479,1.72808545314882,3.13632444021703,2.62035076495413,1.21377911746339,3.55409859618945,1.30877970992015,1.03691978633434,0,0,3.43888055901151,4.13646226142744,1.75006069509643,2.84151611651008,3.04121025883401,5.39843297770468,4.29674469985035,3.46035836604846,2.17425708743405,1.15212002503146,0.948033361884535,2.02725215290164,1.74608627180206,1.94881234466693,2.50637373934474,0.79472541912506,1.20195449519969,0.886137163047463,1.21159739937777,1.37172251979,1.00826185136841,1.55932609183604,0.673482891482306,1.40252282617883,1.36038230169127,0.221985953374065,0.269141569828427,0.335769232728157,0.772758376128762,1.50145980360946,0.915758121336325,0.214368379079066,0.501572104035363,0,0.920650473014354,0,0.68741272937475,0,0,0,1.35096360967266,0.906284817968409,0.51776031175182,0.518936737920883,0.798049746802062,2.56100408631201,1.21553358534147,2.51535795153579,4.04455718590031,2.66696073361938,2.67845574410562,3.53011130550997,1.76888048234658,3.29523089857312,3.77252682772152,3.83930180626518,3.64943368707755,3.4461281373368,1.90517476513229,4.40360438590451,3.6652751888104,2.47251540481984,2.79677948255355,4.80016953339582,3.72699192934609,3.33810665926249,3.92435324907287,3.57615645578256,2.96151127620868,4.75612729469209,2.89376682581627,3.25929873230068,1.68342681497322,3.08451047122853,2.06859412988683,6.13846564754534,2.47898945897546,2.50778594275484,0.999242311751784,3.04111090979031,4.72716318906256,3.25190164517034,5.51478547798789,4.86922454802885 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0.513602189793617,0.262261207256992,7.32841475994458,6.07425802169478,3.49780939064073,2.68142840554502,3.97631857456642,2.97072756258621,2.63634199468316,0.198581902401771,0,0,0.91763712426868,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,19.0509202037889,25.2176562909674,0,0,0,0,17.5783284909501,21.0960543021426,22.5115209908733,17.0587131528994,14.3439551841274,15.0508209439658,0.377690453926732,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.55994568650145,0,0.838913030288682,0,1.00828139742739,2.31533492432352,3.72493471920384,1.03134418455488,0.404632921719196,0.528990979272033,0,0,0,4.94944844504769,2.96659908770092,4.9733608046227,2.69640099466564,2.30530983192933,0.311068836925433,0.270011876663381,0,1.71390590642282,1.76694832761291,0.122490799214954,0.862609239164127,0,1.10115880999389,1.0214987046815,0.921639199537461,0.131886287730194,0.0914876436024097,0,2.79182999001381,1.68828783009504,0.916789486660861,1.47314292736834,1.42371680799103,0.559198337475902,0.075726193333184,0.151143120213571,12.1743085254705,24.0918685554788,1.3599426674155,2.15881276655127,11.0461990966104,4.03224198387602,3.7919993435573,0,0,0,0,0,0,0,0,0,0,3.53970027129086,5.43769555659061,2.22663208597237,2.08182392119363,4.56698217468212,4.61230994512117,5.87818298155228,5.64425794251383,2.76466500925286,6.42706916109372,1.3013942122792,22.9998743506967,3.07357014900077,4.63767188766826,3.87900202508178,0,0.585561594023094,0.628340120440365,0.766371165625774,9.94465533399138,25.1959147017231,16.5191295194984,2.99581278809645,5.03250663100489,0.376963056338593,0.869121600961382,0.767146371990992,0.62336413367868,1.78465389374533,3.66621709861139,10.698999472468,0.505445516867349,0.631325567659422,0.650602214813519,0.919608417733892,0.360124259610698,1.65775299619287,0.680364991513279,0.2562274405697,0.655912071918102,0.517406741478031,1.07783996466421,0.378212160335639,0.351902248327898,0.876782929710299,1.11218899690239,2.43776516565517,1.4404749548556,1.59227413454795,32.3018066164088,37.058098624519,30.4054944353284,2.27838349789052,2.34526059981096,1.62055855314913,2.3674473558521,1.18058539048442,1.54267112887378,2.55787339225449,1.87791380979733,4.55384835231961,2.13927804887525,4.92502392237286,2.35099547682982,2.63159977365598,3.29325172936576,4.2946054003319,0.210289948564127,0.514523061896422,0,1.32225283331772,1.70630600428187,1.62565670302307,1.15980715189884,1.21010114774006,2.89091456998331,2.28270751335071,0.474529061544512,1.97638745668813,2.5133520880027,2.98434708061726,2.9244613067868,1.79763881730844,0.864552199498777,0.995706366271836,2.46568271239006,3.65595240351132,5.63538678365402,4.88763186828754,5.62462212786115,6.59276706968994,9.99137286563265,5.46157547524528,5.02395929092399,6.04646103216823,8.30067355844017,7.17433954579204,10.0245087507734,11.2431056192427,14.4030686185837,14.470629585145,9.16653066413111,11.2201493605816,12.1601420081277,15.1008777253445,11.5014565221884,16.7463426450827,8.7370548472077,9.09283960609602,8.43167843552987,10.1313139486307,7.39012760666419,2.08440552947533,1.79261474086228,2.71592137240301,4.92849521405854,9.71536293162531,14.7587057349329,12.0982861671835,10.8768249433272,11.2946991720875,13.8725648732014,9.83179888294428,9.15230403889247,9.69148692496127,0,1.63171705145613,1.47529281905711,2.48343071674259,0.80275294993896,0.703270119553219,0,4.79694761688309,0.315508219416257,0,0,0,0,0.283076530788832,0.404810701674894,0,0,2.57057053137446,2.55492153374884,3.38324646967785,2.76907830901079,2.63952196756057,2.65490276679926,2.42780636154981,1.51161778482376,4.52652191414155,2.06711325016541,3.07435147943927,2.84271122485043,3.63533729477506,2.49548164869305,2.52829406348653,0,1.03135543248187,1.36175842301515,1.26042765821917,0.905510786479282,2.35770738534752,0.532020700926821,1.60531935841864,1.48094118541909,2.43571959291679,0.704015124191131,3.1774810629573,0.441056796109924,2.4732937941222,2.26050197374268,2.17126529741361,2.26807453605959,1.14898629821543,2.91480836629851,0.556275906031529,9.56876932467975,7.42992724667601,13.3340059706192,10.5486335922627,5.19438065339896,7.32090154260872,1.5298058699447,2.93898049879682,3.04039942369732,0.954670618015114,0.949007980743406,1.62655573701479,1.72808545314882,3.13632444021703,2.62035076495413,1.21377911746339,3.55409859618945,1.30877970992015,1.03691978633434,0,0,3.43888055901151,4.13646226142744,1.75006069509643,2.84151611651008,3.04121025883401,5.39843297770468,4.29674469985035,3.46035836604846,2.17425708743405,1.15212002503146,0.948033361884535,2.02725215290164,1.74608627180206,1.94881234466693,2.50637373934474,0.79472541912506,1.20195449519969,0.886137163047463,1.21159739937777,1.37172251979,1.00826185136841,1.55932609183604,0.673482891482306,1.40252282617883,1.36038230169127,0.221985953374065,0.269141569828427,0.335769232728157,0.772758376128762,1.50145980360946,0.915758121336325,0.214368379079066,0.501572104035363,0,0.920650473014354,0,0.68741272937475,0,0,0,1.35096360967266,0.906284817968409,0.51776031175182,0.518936737920883,0.798049746802062,2.56100408631201,1.21553358534147,2.51535795153579,4.04455718590031,2.66696073361938,2.67845574410562,3.53011130550997,1.76888048234658,3.29523089857312,3.77252682772152,3.83930180626518,3.64943368707755,3.4461281373368,1.90517476513229,4.40360438590451,3.6652751888104,2.47251540481984,2.79677948255355,4.80016953339582,3.72699192934609,3.33810665926249,3.92435324907287,3.57615645578256,2.96151127620868,4.75612729469209,2.89376682581627,3.25929873230068,1.68342681497322,3.08451047122853,2.06859412988683,6.13846564754534,2.47898945897546,2.50778594275484,0.999242311751784,3.04111090979031,4.72716318906256,3.25190164517034,5.51478547798789,4.86922454802885 | ||
|short_description=p2@Rasgrp2 | |short_description=p2@Rasgrp2 | ||
}} | }} |
Revision as of 19:24, 13 November 2012
Short description: | p2@Rasgrp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rasgrp2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000113471, ENSMUST00000122930_5end |
EntrezGene: | Rasgrp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 6.50e-20 | 66 |
trunk region element | 2.41e-18 | 79 |
trunk | 7.34e-17 | 90 |
abdomen element | 7.74e-17 | 49 |
abdominal segment element | 7.74e-17 | 49 |
abdominal segment of trunk | 7.74e-17 | 49 |
abdomen | 7.74e-17 | 49 |
mesenchyme | 3.72e-11 | 61 |
entire embryonic mesenchyme | 3.72e-11 | 61 |
liver | 6.49e-11 | 22 |
epithelial sac | 6.49e-11 | 22 |
digestive gland | 6.49e-11 | 22 |
epithelium of foregut-midgut junction | 6.49e-11 | 22 |
anatomical boundary | 6.49e-11 | 22 |
hepatobiliary system | 6.49e-11 | 22 |
foregut-midgut junction | 6.49e-11 | 22 |
hepatic diverticulum | 6.49e-11 | 22 |
liver primordium | 6.49e-11 | 22 |
septum transversum | 6.49e-11 | 22 |
liver bud | 6.49e-11 | 22 |
digestive tract diverticulum | 7.24e-10 | 23 |
sac | 7.24e-10 | 23 |
exocrine gland | 2.62e-09 | 25 |
exocrine system | 2.62e-09 | 25 |
trunk mesenchyme | 5.27e-08 | 45 |
epithelial tube | 2.37e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.