FFCP PHASE1:Mm9::chr1:74648015..74648094,+: Difference between revisions
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|id=chr1:74648015..74648094,+ | |id=chr1:74648015..74648094,+ | ||
|ontology_enrichment_celltype=CL:0000221!8.46e-13!44;CL:0000133!8.46e-13!44;CL:0000055!1.40e-12!50;CL:0002319!1.48e-12!43;CL:0000393!2.75e-09!39;CL:0000211!2.75e-09!39;CL:0000117!6.99e-09!23;CL:0000337!6.99e-09!23;CL:0000540!8.85e-09!33;CL:0000047!8.85e-09!33;CL:0000031!8.85e-09!33;CL:0000404!8.85e-09!33 | |ontology_enrichment_celltype=CL:0000221!8.46e-13!44;CL:0000133!8.46e-13!44;CL:0000055!1.40e-12!50;CL:0002319!1.48e-12!43;CL:0000393!2.75e-09!39;CL:0000211!2.75e-09!39;CL:0000117!6.99e-09!23;CL:0000337!6.99e-09!23;CL:0000540!8.85e-09!33;CL:0000047!8.85e-09!33;CL:0000031!8.85e-09!33;CL:0000404!8.85e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.40e-13,44;CL:0000133,6.40e-13,44;CL:0002319,1.13e-12,43;CL:0000393,2.27e-09,39;CL:0000211,2.27e-09,39;CL:0000117,5.83e-09,23;CL:0000337,5.83e-09,23;CL:0000540,7.40e-09,33;CL:0000047,7.40e-09,33;CL:0000031,7.40e-09,33;CL:0000404,7.40e-09,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.12e-17!73;UBERON:0005743!3.12e-17!73;UBERON:0004121!7.12e-17!102;UBERON:0000924!7.12e-17!102;UBERON:0006601!7.12e-17!102;UBERON:0000073!8.42e-17!75;UBERON:0001016!8.42e-17!75;UBERON:0002346!2.31e-15!71;UBERON:0003075!2.31e-15!71;UBERON:0007284!2.31e-15!71;UBERON:0000033!1.24e-14!63;UBERON:0003056!1.80e-13!49;UBERON:0001049!1.75e-12!52;UBERON:0005068!1.75e-12!52;UBERON:0006241!1.75e-12!52;UBERON:0007135!1.75e-12!52;UBERON:0000955!1.93e-11!50;UBERON:0006238!1.93e-11!50;UBERON:0002616!3.83e-11!49;UBERON:0003080!4.82e-10!40;UBERON:0002780!9.72e-10!39;UBERON:0001890!9.72e-10!39;UBERON:0006240!9.72e-10!39;UBERON:0002020!8.11e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!3.12e-17!73;UBERON:0005743!3.12e-17!73;UBERON:0004121!7.12e-17!102;UBERON:0000924!7.12e-17!102;UBERON:0006601!7.12e-17!102;UBERON:0000073!8.42e-17!75;UBERON:0001016!8.42e-17!75;UBERON:0002346!2.31e-15!71;UBERON:0003075!2.31e-15!71;UBERON:0007284!2.31e-15!71;UBERON:0000033!1.24e-14!63;UBERON:0003056!1.80e-13!49;UBERON:0001049!1.75e-12!52;UBERON:0005068!1.75e-12!52;UBERON:0006241!1.75e-12!52;UBERON:0007135!1.75e-12!52;UBERON:0000955!1.93e-11!50;UBERON:0006238!1.93e-11!50;UBERON:0002616!3.83e-11!49;UBERON:0003080!4.82e-10!40;UBERON:0002780!9.72e-10!39;UBERON:0001890!9.72e-10!39;UBERON:0006240!9.72e-10!39;UBERON:0002020!8.11e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.03e-17,73;UBERON:0004121,2.96e-17,95;UBERON:0000924,2.96e-17,95;UBERON:0006601,2.96e-17,95;UBERON:0001016,5.55e-17,75;UBERON:0002346,3.85e-16,64;UBERON:0003075,3.85e-16,64;UBERON:0007284,3.85e-16,64;UBERON:0010371,4.01e-14,73;UBERON:0003056,1.29e-13,49;UBERON:0001049,1.29e-12,52;UBERON:0005068,1.29e-12,52;UBERON:0006241,1.29e-12,52;UBERON:0007135,1.29e-12,52;UBERON:0000073,1.32e-12,54;UBERON:0000955,1.71e-11,47;UBERON:0006238,1.71e-11,47;UBERON:0002616,3.40e-11,46;UBERON:0010314,5.17e-11,92;UBERON:0003080,3.76e-10,40;UBERON:0002780,7.64e-10,39;UBERON:0001890,7.64e-10,39;UBERON:0006240,7.64e-10,39;UBERON:0002020,6.89e-07,34 | |||
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| ||
|short_description=p1@Stk36 | |short_description=p1@Stk36 | ||
}} | }} |
Revision as of 19:08, 13 November 2012
Short description: | p1@Stk36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stk36_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000042446, ENSMUST00000087183, ENSMUST00000113694, ENSMUST00000113699, ENSMUST00000145673, ENSMUST00000148456, NM_175031, uc007bmu.1, uc007bmv.1_5end |
EntrezGene: | Stk36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.40e-13 | 44 |
neurectodermal cell | 6.40e-13 | 44 |
neural cell | 1.13e-12 | 43 |
electrically responsive cell | 2.27e-09 | 39 |
electrically active cell | 2.27e-09 | 39 |
CNS neuron (sensu Vertebrata) | 5.83e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.83e-09 | 23 |
neuron | 7.40e-09 | 33 |
neuronal stem cell | 7.40e-09 | 33 |
neuroblast | 7.40e-09 | 33 |
electrically signaling cell | 7.40e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.03e-17 | 73 |
ectoderm-derived structure | 2.96e-17 | 95 |
ectoderm | 2.96e-17 | 95 |
presumptive ectoderm | 2.96e-17 | 95 |
nervous system | 5.55e-17 | 75 |
neurectoderm | 3.85e-16 | 64 |
neural plate | 3.85e-16 | 64 |
presumptive neural plate | 3.85e-16 | 64 |
ecto-epithelium | 4.01e-14 | 73 |
pre-chordal neural plate | 1.29e-13 | 49 |
neural tube | 1.29e-12 | 52 |
neural rod | 1.29e-12 | 52 |
future spinal cord | 1.29e-12 | 52 |
neural keel | 1.29e-12 | 52 |
regional part of nervous system | 1.32e-12 | 54 |
brain | 1.71e-11 | 47 |
future brain | 1.71e-11 | 47 |
regional part of brain | 3.40e-11 | 46 |
structure with developmental contribution from neural crest | 5.17e-11 | 92 |
anterior neural tube | 3.76e-10 | 40 |
regional part of forebrain | 7.64e-10 | 39 |
forebrain | 7.64e-10 | 39 |
future forebrain | 7.64e-10 | 39 |
gray matter | 6.89e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.