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FFCP PHASE1:Mm9::chr2:52414059..52414091,-: Difference between revisions

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|id=chr2:52414059..52414091,-
|id=chr2:52414059..52414091,-
|ontology_enrichment_celltype=CL:0000117!7.90e-15!23;CL:0000337!7.90e-15!23;CL:0000540!8.50e-10!33;CL:0000047!8.50e-10!33;CL:0000031!8.50e-10!33;CL:0000404!8.50e-10!33;CL:0000393!4.38e-07!39;CL:0000211!4.38e-07!39
|ontology_enrichment_celltype=CL:0000117!7.90e-15!23;CL:0000337!7.90e-15!23;CL:0000540!8.50e-10!33;CL:0000047!8.50e-10!33;CL:0000031!8.50e-10!33;CL:0000404!8.50e-10!33;CL:0000393!4.38e-07!39;CL:0000211!4.38e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-20,23;CL:0000337,2.10e-20,23;CL:0000540,9.93e-13,33;CL:0000047,9.93e-13,33;CL:0000031,9.93e-13,33;CL:0000404,9.93e-13,33;CL:0000393,1.45e-09,39;CL:0000211,1.45e-09,39;CL:0002319,5.49e-08,43;CL:0000221,1.21e-07,44;CL:0000133,1.21e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.71e-20!71;UBERON:0003075!2.71e-20!71;UBERON:0007284!2.71e-20!71;UBERON:0000033!4.58e-20!63;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0001049!3.41e-19!52;UBERON:0005068!3.41e-19!52;UBERON:0006241!3.41e-19!52;UBERON:0007135!3.41e-19!52;UBERON:0002020!9.44e-19!34;UBERON:0000073!1.77e-18!75;UBERON:0001016!1.77e-18!75;UBERON:0000955!2.86e-18!50;UBERON:0006238!2.86e-18!50;UBERON:0001017!3.03e-18!73;UBERON:0005743!3.03e-18!73;UBERON:0002616!1.65e-17!49;UBERON:0003056!1.05e-15!49;UBERON:0002791!1.38e-15!29;UBERON:0003528!1.38e-15!29;UBERON:0001893!1.38e-15!29;UBERON:0003080!7.79e-14!40;UBERON:0002780!4.25e-13!39;UBERON:0001890!4.25e-13!39;UBERON:0006240!4.25e-13!39;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0007811!9.52e-10!86;UBERON:0002619!1.74e-08!17;UBERON:0002021!7.42e-08!10;UBERON:0000411!7.42e-08!10;UBERON:0001950!7.42e-08!10;UBERON:0000153!3.02e-07!94
|ontology_enrichment_uberon=UBERON:0002346!2.71e-20!71;UBERON:0003075!2.71e-20!71;UBERON:0007284!2.71e-20!71;UBERON:0000033!4.58e-20!63;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0001049!3.41e-19!52;UBERON:0005068!3.41e-19!52;UBERON:0006241!3.41e-19!52;UBERON:0007135!3.41e-19!52;UBERON:0002020!9.44e-19!34;UBERON:0000073!1.77e-18!75;UBERON:0001016!1.77e-18!75;UBERON:0000955!2.86e-18!50;UBERON:0006238!2.86e-18!50;UBERON:0001017!3.03e-18!73;UBERON:0005743!3.03e-18!73;UBERON:0002616!1.65e-17!49;UBERON:0003056!1.05e-15!49;UBERON:0002791!1.38e-15!29;UBERON:0003528!1.38e-15!29;UBERON:0001893!1.38e-15!29;UBERON:0003080!7.79e-14!40;UBERON:0002780!4.25e-13!39;UBERON:0001890!4.25e-13!39;UBERON:0006240!4.25e-13!39;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0007811!9.52e-10!86;UBERON:0002619!1.74e-08!17;UBERON:0002021!7.42e-08!10;UBERON:0000411!7.42e-08!10;UBERON:0001950!7.42e-08!10;UBERON:0000153!3.02e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-28,54;UBERON:0002020,9.15e-27,34;UBERON:0001049,1.89e-26,52;UBERON:0005068,1.89e-26,52;UBERON:0006241,1.89e-26,52;UBERON:0007135,1.89e-26,52;UBERON:0002346,6.79e-26,64;UBERON:0003075,6.79e-26,64;UBERON:0007284,6.79e-26,64;UBERON:0001017,1.00e-24,73;UBERON:0001016,1.34e-23,75;UBERON:0003528,3.08e-22,29;UBERON:0002791,3.08e-22,29;UBERON:0001893,3.08e-22,29;UBERON:0000955,5.19e-22,47;UBERON:0006238,5.19e-22,47;UBERON:0010371,1.29e-21,73;UBERON:0002616,5.72e-21,46;UBERON:0004121,1.40e-20,95;UBERON:0000924,1.40e-20,95;UBERON:0006601,1.40e-20,95;UBERON:0003056,1.11e-19,49;UBERON:0003080,3.08e-18,40;UBERON:0010314,7.74e-18,92;UBERON:0002780,3.33e-17,39;UBERON:0001890,3.33e-17,39;UBERON:0006240,3.33e-17,39;UBERON:0000956,3.55e-15,21;UBERON:0001869,3.55e-15,21;UBERON:0000203,3.55e-15,21;UBERON:0002619,4.36e-12,17;UBERON:0002021,1.67e-10,10;UBERON:0000411,1.67e-10,10;UBERON:0001950,1.67e-10,10;UBERON:0003076,7.63e-09,12;UBERON:0003057,7.63e-09,12;UBERON:0002420,2.94e-08,8;UBERON:0007245,2.94e-08,8;UBERON:0010009,2.94e-08,8;UBERON:0010011,2.94e-08,8;UBERON:0000454,2.94e-08,8;UBERON:0000025,1.45e-07,114;UBERON:0002240,8.65e-07,6;UBERON:0005174,8.65e-07,6;UBERON:0001137,8.65e-07,6
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0.699561878128147,1.41957974411207,1.09691546884591,0.84877930359606,11.3107575900923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,5.66486090406874,7.93486468908049,5.70448263155561,0,0,0,0,0,0.299600110518405,0,4.45865332926454,4.3201900266141,2.73422449756797,7.42692559449889,9.27647871996777,6.73699395682247,3.54628242767475,2.75765635983006,48.450987639731,34.7309559591711,38.0944202475484,3.42904348098504,4.29991924931325,5.73004707612436,23.1721889171146,22.5105044012672,28.7260705820403,13.5529149317887,14.8066548031067,8.01517617048792,0.227178579999552,0.68014404096107,0,0,0,0,0,0,1.54488862144927,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.125666591329675,0,1.01219549843938,0,0,0,0,0,144.340932926693,121.897983365431,0.255457055208591,0,0,0,71.3003443566956,33.8550446085784,6.53402630986895,26.2474723490337,23.5258220743904,43.4277013129481,37.9644555578553,0,0,0,4.20883711772948,0,0.229902104433473,0.540186389416048,1.05493372485001,1.29269348387523,2.0498195245576,2.06143794031403,7.24369438069244,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.462801338662135,0.232533944750408,0.268273401399619,0.583826711835847,0.493679549740441,1.47750717671186,1.05389452409612,1.02339991197733,1.75640092232841,2.54992195644706,35.9595812044658,7.61494131606705,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,57.4771112156295,62.0049822072755,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.395287777946524,49.1621614125365,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0.291480836629851,68.4219364418781,1.02522528478712,0,0,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,9.60078132449013,14.2700823317225,20.6242384838183,12.5452823110892,19.182310553578,12.0863023582352,24.300810008345,18.9134905354173,19.0319811773366,19.1571315348173,0.830298780673413,1.59609949360412,3.24393850932855,2.18796045361465,1.25767897576789,1.10306105070008,0.44449345560323,1.44224540067226,2.24643446714271,1.26348605881899,1.77435509923168,0.754505365544305,1.87283014939765,1.6646539625266,1.7230640686684,2.85776214769844,1.73826488917283,1.54327376370964,1.23625770240992,1.17759136107518,1.02860775715625,1.59728225543404,2.38436189947321,2.47088908274958,2.4468438907986,2.03075058940024,2.37806364734604,1.57841826862706,1.90125759384206,1.68342681497322,1.06771516311757,1.57607171800902,2.45538625901814,0.929621047115796,1.35034627686799,2.99772693525535,1.87145286756327,0.644613162144895,0.382576664137687,0.661774257358546,1.15933917810211
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0.699561878128147,1.41957974411207,1.09691546884591,0.84877930359606,11.3107575900923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,5.66486090406874,7.93486468908049,5.70448263155561,0,0,0,0,0,0.299600110518405,0,4.45865332926454,4.3201900266141,2.73422449756797,7.42692559449889,9.27647871996777,6.73699395682247,3.54628242767475,2.75765635983006,48.450987639731,34.7309559591711,38.0944202475484,3.42904348098504,4.29991924931325,5.73004707612436,23.1721889171146,22.5105044012672,28.7260705820403,13.5529149317887,14.8066548031067,8.01517617048792,0.227178579999552,0.68014404096107,0,0,0,0,0,0,1.54488862144927,0,0,0,0.422530259330042,0,0,0,0,0,0,1.25602267690966,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.705532242814229,0.125666591329675,0,1.01219549843938,0,0,0,0,0,144.340932926693,121.897983365431,0.255457055208591,0,0,0,71.3003443566956,33.8550446085784,6.53402630986895,26.2474723490337,23.5258220743904,43.4277013129481,37.9644555578553,0,0,0,4.20883711772948,0,0.229902104433473,0.540186389416048,1.05493372485001,1.29269348387523,2.0498195245576,2.06143794031403,7.24369438069244,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.462801338662135,0.232533944750408,0.268273401399619,0.583826711835847,0.493679549740441,1.47750717671186,1.05389452409612,1.02339991197733,1.75640092232841,2.54992195644706,35.9595812044658,7.61494131606705,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,57.4771112156295,62.0049822072755,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.395287777946524,49.1621614125365,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0.291480836629851,68.4219364418781,1.02522528478712,0,0,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,0,0,0,0,9.60078132449013,14.2700823317225,20.6242384838183,12.5452823110892,19.182310553578,12.0863023582352,24.300810008345,18.9134905354173,19.0319811773366,19.1571315348173,0.830298780673413,1.59609949360412,3.24393850932855,2.18796045361465,1.25767897576789,1.10306105070008,0.44449345560323,1.44224540067226,2.24643446714271,1.26348605881899,1.77435509923168,0.754505365544305,1.87283014939765,1.6646539625266,1.7230640686684,2.85776214769844,1.73826488917283,1.54327376370964,1.23625770240992,1.17759136107518,1.02860775715625,1.59728225543404,2.38436189947321,2.47088908274958,2.4468438907986,2.03075058940024,2.37806364734604,1.57841826862706,1.90125759384206,1.68342681497322,1.06771516311757,1.57607171800902,2.45538625901814,0.929621047115796,1.35034627686799,2.99772693525535,1.87145286756327,0.644613162144895,0.382576664137687,0.661774257358546,1.15933917810211
|short_description=p1@Cacnb4
|short_description=p1@Cacnb4
}}
}}

Revision as of 18:31, 13 November 2012

Short description:p1@Cacnb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cacnb4_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: 0bp_to_ENSMUST00000102760, ENSMUST00000102761, NM_146123, uc008jra.1, uc008jrb.1_5end
EntrezGene:Cacnb4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Cacnb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2144.34
cerebellum, neonate N30.CNhs11135.1395-42I2121.90
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A471.30
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D526.25
cortex, neonate N30.CNhs11107.1392-42F223.53
diencephalon, adult.CNhs10482.20-12F243.43
diencephalon, neonate N30.CNhs11201.1388-42B237.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E835.96
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C257.48
medulla oblongata, neonate N30.CNhs11200.1396-42A362.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I949.16
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C968.42
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.10e-2023
neuroblast (sensu Vertebrata)2.10e-2023
neuron9.93e-1333
neuronal stem cell9.93e-1333
neuroblast9.93e-1333
electrically signaling cell9.93e-1333
electrically responsive cell1.45e-0939
electrically active cell1.45e-0939
neural cell5.49e-0843
ectodermal cell1.21e-0744
neurectodermal cell1.21e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.44e-2854
gray matter9.15e-2734
neural tube1.89e-2652
neural rod1.89e-2652
future spinal cord1.89e-2652
neural keel1.89e-2652
neurectoderm6.79e-2664
neural plate6.79e-2664
presumptive neural plate6.79e-2664
central nervous system1.00e-2473
nervous system1.34e-2375
brain grey matter3.08e-2229
regional part of telencephalon3.08e-2229
telencephalon3.08e-2229
brain5.19e-2247
future brain5.19e-2247
ecto-epithelium1.29e-2173
regional part of brain5.72e-2146
ectoderm-derived structure1.40e-2095
ectoderm1.40e-2095
presumptive ectoderm1.40e-2095
pre-chordal neural plate1.11e-1949
anterior neural tube3.08e-1840
structure with developmental contribution from neural crest7.74e-1892
regional part of forebrain3.33e-1739
forebrain3.33e-1739
future forebrain3.33e-1739
cerebral cortex3.55e-1521
cerebral hemisphere3.55e-1521
pallium3.55e-1521
regional part of cerebral cortex4.36e-1217
occipital lobe1.67e-1010
visual cortex1.67e-1010
neocortex1.67e-1010
posterior neural tube7.63e-0912
chordal neural plate7.63e-0912
basal ganglion2.94e-088
nuclear complex of neuraxis2.94e-088
aggregate regional part of brain2.94e-088
collection of basal ganglia2.94e-088
cerebral subcortex2.94e-088
tube1.45e-07114
spinal cord8.65e-076
dorsal region element8.65e-076
dorsum8.65e-076







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