FFCP PHASE1:Mm9::chr3:146432989..146433053,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:146432989..146433053,- | |id=chr3:146432989..146433053,- | ||
|ontology_enrichment_celltype=CL:0000117!2.50e-12!23;CL:0000337!2.50e-12!23;CL:0000540!2.36e-08!33;CL:0000047!2.36e-08!33;CL:0000031!2.36e-08!33;CL:0000404!2.36e-08!33;CL:0002319!1.41e-07!43;CL:0000221!4.24e-07!44;CL:0000133!4.24e-07!44;CL:0000393!4.50e-07!39;CL:0000211!4.50e-07!39 | |ontology_enrichment_celltype=CL:0000117!2.50e-12!23;CL:0000337!2.50e-12!23;CL:0000540!2.36e-08!33;CL:0000047!2.36e-08!33;CL:0000031!2.36e-08!33;CL:0000404!2.36e-08!33;CL:0002319!1.41e-07!43;CL:0000221!4.24e-07!44;CL:0000133!4.24e-07!44;CL:0000393!4.50e-07!39;CL:0000211!4.50e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.07e-16,23;CL:0000337,5.07e-16,23;CL:0000540,3.09e-10,33;CL:0000047,3.09e-10,33;CL:0000031,3.09e-10,33;CL:0000404,3.09e-10,33;CL:0000393,9.89e-09,39;CL:0000211,9.89e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.16e-25!71;UBERON:0003075!9.16e-25!71;UBERON:0007284!9.16e-25!71;UBERON:0001017!1.14e-22!73;UBERON:0005743!1.14e-22!73;UBERON:0000073!1.21e-22!75;UBERON:0001016!1.21e-22!75;UBERON:0001049!4.37e-22!52;UBERON:0005068!4.37e-22!52;UBERON:0006241!4.37e-22!52;UBERON:0007135!4.37e-22!52;UBERON:0000955!4.67e-21!50;UBERON:0006238!4.67e-21!50;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0002616!2.20e-20!49;UBERON:0002020!1.48e-19!34;UBERON:0000033!3.64e-19!63;UBERON:0003056!4.73e-18!49;UBERON:0003080!8.52e-18!40;UBERON:0002780!4.16e-17!39;UBERON:0001890!4.16e-17!39;UBERON:0006240!4.16e-17!39;UBERON:0002791!1.10e-16!29;UBERON:0003528!1.10e-16!29;UBERON:0001893!1.10e-16!29;UBERON:0000956!6.84e-12!21;UBERON:0001869!6.84e-12!21;UBERON:0000203!6.84e-12!21;UBERON:0002619!9.42e-11!17;UBERON:0007811!1.78e-09!86;UBERON:0002021!7.49e-09!10;UBERON:0000411!7.49e-09!10;UBERON:0001950!7.49e-09!10;UBERON:0000153!4.39e-07!94 | |ontology_enrichment_uberon=UBERON:0002346!9.16e-25!71;UBERON:0003075!9.16e-25!71;UBERON:0007284!9.16e-25!71;UBERON:0001017!1.14e-22!73;UBERON:0005743!1.14e-22!73;UBERON:0000073!1.21e-22!75;UBERON:0001016!1.21e-22!75;UBERON:0001049!4.37e-22!52;UBERON:0005068!4.37e-22!52;UBERON:0006241!4.37e-22!52;UBERON:0007135!4.37e-22!52;UBERON:0000955!4.67e-21!50;UBERON:0006238!4.67e-21!50;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0002616!2.20e-20!49;UBERON:0002020!1.48e-19!34;UBERON:0000033!3.64e-19!63;UBERON:0003056!4.73e-18!49;UBERON:0003080!8.52e-18!40;UBERON:0002780!4.16e-17!39;UBERON:0001890!4.16e-17!39;UBERON:0006240!4.16e-17!39;UBERON:0002791!1.10e-16!29;UBERON:0003528!1.10e-16!29;UBERON:0001893!1.10e-16!29;UBERON:0000956!6.84e-12!21;UBERON:0001869!6.84e-12!21;UBERON:0000203!6.84e-12!21;UBERON:0002619!9.42e-11!17;UBERON:0007811!1.78e-09!86;UBERON:0002021!7.49e-09!10;UBERON:0000411!7.49e-09!10;UBERON:0001950!7.49e-09!10;UBERON:0000153!4.39e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.12e-28,54;UBERON:0001049,6.05e-27,52;UBERON:0005068,6.05e-27,52;UBERON:0006241,6.05e-27,52;UBERON:0007135,6.05e-27,52;UBERON:0002346,2.20e-26,64;UBERON:0003075,2.20e-26,64;UBERON:0007284,2.20e-26,64;UBERON:0001017,2.12e-25,73;UBERON:0001016,3.61e-24,75;UBERON:0002020,9.02e-24,34;UBERON:0000955,5.20e-23,47;UBERON:0006238,5.20e-23,47;UBERON:0002616,3.81e-22,46;UBERON:0003056,6.29e-21,49;UBERON:0010371,9.83e-21,73;UBERON:0003080,1.68e-20,40;UBERON:0004121,5.36e-20,95;UBERON:0000924,5.36e-20,95;UBERON:0006601,5.36e-20,95;UBERON:0003528,6.14e-20,29;UBERON:0002791,6.14e-20,29;UBERON:0001893,6.14e-20,29;UBERON:0002780,1.31e-19,39;UBERON:0001890,1.31e-19,39;UBERON:0006240,1.31e-19,39;UBERON:0010314,2.66e-19,92;UBERON:0000956,1.38e-13,21;UBERON:0001869,1.38e-13,21;UBERON:0000203,1.38e-13,21;UBERON:0002619,5.48e-12,17;UBERON:0002021,2.35e-11,10;UBERON:0000411,2.35e-11,10;UBERON:0001950,2.35e-11,10;UBERON:0002420,1.34e-07,8;UBERON:0007245,1.34e-07,8;UBERON:0010009,1.34e-07,8;UBERON:0010011,1.34e-07,8;UBERON:0000454,1.34e-07,8;UBERON:0003076,6.09e-07,12;UBERON:0003057,6.09e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0.839918529752175,1.43752564364972,0,0,0,1.54355661621568,1.43266719969378,0.515672092277442,10.9250888864183,14.8117474196169,6.97214543856797,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,1.75507719831198,2.52389953621658,13.4255962669788,18.9946945218388,5.63457676388789,4.88811902193005,2.75765635983006,38.540558349786,37.9231394113008,31.6429458507862,11.6059933202571,13.174220678747,10.939180781692,24.8472869111229,55.7134983931363,50.4234217663473,16.7938293719991,22.6370972470574,15.8439528951505,0.302904773332736,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,0,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0.258937883647172,7.42210695324124,0.693941307064543,1.21786191324856,1.84492397804847,2.71300752994721,3.52766121407114,1.63366568728578,0,0.289198713839823,0,0,0,0,1.86391761218122,23.1296829639122,24.7147114039877,0,0,0,0,59.7664651225243,106.59764045674,29.0261553380717,141.145347996128,132.716322354442,57.5572883429981,71.8728795390166,0,0,0,2.73574412652416,0,0,0.540186389416048,1.05493372485001,2.4493139694478,3.71529788826064,3.65436725782942,14.2286853906459,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0.787056926989615,0.771335564436891,0.232533944750408,0,1.16765342367169,0.16455984991348,0.32833492815819,0.648550476366846,0.584799949701329,0,0.268412837520744,62.0355348264175,23.4622516224768,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,0.502670417600539,1.39269530428806,0.974820435595601,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,42.0642545768015,40.5552435609023,0,0,0.315508219416257,0.390438744296638,1.93881057959519,0,0,0,0,1.16902343164525,0,41.1291285019913,0.283880170416537,0,0,0.164970122972535,2.65490276679926,0.242780636154981,0,0.943025398779491,1.18120757152309,1.84461088766356,0.258428293168221,1.45413491791002,2.49548164869305,1.26414703174326,1.05418608574999,0,20.0859367394735,0,0,0.643011105094777,0.886701168211368,1.24858172321449,2.79733335023606,2.13125464380219,0,0,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0.164140899745061,0.582961673259701,47.28345201268,0.170870880797853,0,0,0,0,0,0.339956859987711,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.674321731924103,0.909188012978695,0.785267825952089,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0.288635524920988,0,0,0,0,0.167884616364078,0.386379188064381,0,0,0,0,182.97959700793,198.400176934593,167.858385437743,165.150908232284,179.491620179908,146.546416093602,157.955265054243,142.751821422078,176.72553950384,144.455126978758,0.415149390336707,0.399024873401031,1.02440163452481,0.729320151204882,2.93458427679175,3.30918315210025,3.77819437262746,5.15087643097235,4.81378814387723,3.79045817645696,3.8021894983536,4.52703219326583,2.62196220915671,3.07320731543373,3.10151532360312,1.90517476513229,1.97003354106254,3.08654752741928,1.64834360321323,3.38557516309114,3.77156177623957,2.66213709239006,3.09967046931517,4.79643174886684,3.67026583619789,2.876896668317,2.92684756596436,3.15683653725411,2.71608227691724,2.24456908663095,2.84724043498018,4.23569274214923,3.27384834535751,3.25367366490529,2.50778594275484,4.99621155875892,3.74290573512653,3.43793686477277,2.48674831689496,2.20591419119516,1.39120701372253 | |phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0.839918529752175,1.43752564364972,0,0,0,1.54355661621568,1.43266719969378,0.515672092277442,10.9250888864183,14.8117474196169,6.97214543856797,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,1.75507719831198,2.52389953621658,13.4255962669788,18.9946945218388,5.63457676388789,4.88811902193005,2.75765635983006,38.540558349786,37.9231394113008,31.6429458507862,11.6059933202571,13.174220678747,10.939180781692,24.8472869111229,55.7134983931363,50.4234217663473,16.7938293719991,22.6370972470574,15.8439528951505,0.302904773332736,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,0,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0.258937883647172,7.42210695324124,0.693941307064543,1.21786191324856,1.84492397804847,2.71300752994721,3.52766121407114,1.63366568728578,0,0.289198713839823,0,0,0,0,1.86391761218122,23.1296829639122,24.7147114039877,0,0,0,0,59.7664651225243,106.59764045674,29.0261553380717,141.145347996128,132.716322354442,57.5572883429981,71.8728795390166,0,0,0,2.73574412652416,0,0,0.540186389416048,1.05493372485001,2.4493139694478,3.71529788826064,3.65436725782942,14.2286853906459,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0.787056926989615,0.771335564436891,0.232533944750408,0,1.16765342367169,0.16455984991348,0.32833492815819,0.648550476366846,0.584799949701329,0,0.268412837520744,62.0355348264175,23.4622516224768,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,0.502670417600539,1.39269530428806,0.974820435595601,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,42.0642545768015,40.5552435609023,0,0,0.315508219416257,0.390438744296638,1.93881057959519,0,0,0,0,1.16902343164525,0,41.1291285019913,0.283880170416537,0,0,0.164970122972535,2.65490276679926,0.242780636154981,0,0.943025398779491,1.18120757152309,1.84461088766356,0.258428293168221,1.45413491791002,2.49548164869305,1.26414703174326,1.05418608574999,0,20.0859367394735,0,0,0.643011105094777,0.886701168211368,1.24858172321449,2.79733335023606,2.13125464380219,0,0,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0.164140899745061,0.582961673259701,47.28345201268,0.170870880797853,0,0,0,0,0,0.339956859987711,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.674321731924103,0.909188012978695,0.785267825952089,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0.288635524920988,0,0,0,0,0.167884616364078,0.386379188064381,0,0,0,0,182.97959700793,198.400176934593,167.858385437743,165.150908232284,179.491620179908,146.546416093602,157.955265054243,142.751821422078,176.72553950384,144.455126978758,0.415149390336707,0.399024873401031,1.02440163452481,0.729320151204882,2.93458427679175,3.30918315210025,3.77819437262746,5.15087643097235,4.81378814387723,3.79045817645696,3.8021894983536,4.52703219326583,2.62196220915671,3.07320731543373,3.10151532360312,1.90517476513229,1.97003354106254,3.08654752741928,1.64834360321323,3.38557516309114,3.77156177623957,2.66213709239006,3.09967046931517,4.79643174886684,3.67026583619789,2.876896668317,2.92684756596436,3.15683653725411,2.71608227691724,2.24456908663095,2.84724043498018,4.23569274214923,3.27384834535751,3.25367366490529,2.50778594275484,4.99621155875892,3.74290573512653,3.43793686477277,2.48674831689496,2.20591419119516,1.39120701372253 | ||
|short_description=p2@Prkacb | |short_description=p2@Prkacb | ||
}} | }} |
Revision as of 17:08, 13 November 2012
Short description: | p2@Prkacb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prkacb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 148bp_to_NM_001164198, uc008rrs.2_5end |
EntrezGene: | Prkacb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.07e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.07e-16 | 23 |
neuron | 3.09e-10 | 33 |
neuronal stem cell | 3.09e-10 | 33 |
neuroblast | 3.09e-10 | 33 |
electrically signaling cell | 3.09e-10 | 33 |
electrically responsive cell | 9.89e-09 | 39 |
electrically active cell | 9.89e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.