FFCP PHASE1:Mm9::chr9:66643276..66643328,-: Difference between revisions
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|id=chr9:66643276..66643328,- | |id=chr9:66643276..66643328,- | ||
|ontology_enrichment_celltype=CL:0000117!2.42e-14!23;CL:0000337!2.42e-14!23;CL:0000221!3.63e-14!44;CL:0000133!3.63e-14!44;CL:0002319!6.16e-14!43;CL:0000540!2.13e-13!33;CL:0000047!2.13e-13!33;CL:0000031!2.13e-13!33;CL:0000404!2.13e-13!33;CL:0000055!4.55e-13!50;CL:0000393!3.31e-12!39;CL:0000211!3.31e-12!39 | |ontology_enrichment_celltype=CL:0000117!2.42e-14!23;CL:0000337!2.42e-14!23;CL:0000221!3.63e-14!44;CL:0000133!3.63e-14!44;CL:0002319!6.16e-14!43;CL:0000540!2.13e-13!33;CL:0000047!2.13e-13!33;CL:0000031!2.13e-13!33;CL:0000404!2.13e-13!33;CL:0000055!4.55e-13!50;CL:0000393!3.31e-12!39;CL:0000211!3.31e-12!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.71e-14,23;CL:0000337,1.71e-14,23;CL:0000221,5.37e-14,44;CL:0000133,5.37e-14,44;CL:0002319,9.16e-14,43;CL:0000540,2.33e-13,33;CL:0000047,2.33e-13,33;CL:0000031,2.33e-13,33;CL:0000404,2.33e-13,33;CL:0000393,3.56e-12,39;CL:0000211,3.56e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.27e-28!73;UBERON:0005743!6.27e-28!73;UBERON:0000073!2.78e-26!75;UBERON:0001016!2.78e-26!75;UBERON:0004121!4.44e-22!102;UBERON:0000924!4.44e-22!102;UBERON:0006601!4.44e-22!102;UBERON:0001049!1.86e-21!52;UBERON:0005068!1.86e-21!52;UBERON:0006241!1.86e-21!52;UBERON:0007135!1.86e-21!52;UBERON:0000955!6.55e-21!50;UBERON:0006238!6.55e-21!50;UBERON:0002616!2.95e-20!49;UBERON:0002020!1.68e-18!34;UBERON:0000033!2.96e-18!63;UBERON:0003080!1.64e-16!40;UBERON:0002346!3.65e-16!71;UBERON:0003075!3.65e-16!71;UBERON:0007284!3.65e-16!71;UBERON:0002791!4.45e-16!29;UBERON:0003528!4.45e-16!29;UBERON:0001893!4.45e-16!29;UBERON:0002780!5.54e-16!39;UBERON:0001890!5.54e-16!39;UBERON:0006240!5.54e-16!39;UBERON:0003056!2.87e-14!49;UBERON:0000956!1.44e-11!21;UBERON:0001869!1.44e-11!21;UBERON:0000203!1.44e-11!21;UBERON:0002619!3.97e-09!17;UBERON:0000153!1.11e-08!94;UBERON:0007811!8.63e-08!86;UBERON:0004111!2.42e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!6.27e-28!73;UBERON:0005743!6.27e-28!73;UBERON:0000073!2.78e-26!75;UBERON:0001016!2.78e-26!75;UBERON:0004121!4.44e-22!102;UBERON:0000924!4.44e-22!102;UBERON:0006601!4.44e-22!102;UBERON:0001049!1.86e-21!52;UBERON:0005068!1.86e-21!52;UBERON:0006241!1.86e-21!52;UBERON:0007135!1.86e-21!52;UBERON:0000955!6.55e-21!50;UBERON:0006238!6.55e-21!50;UBERON:0002616!2.95e-20!49;UBERON:0002020!1.68e-18!34;UBERON:0000033!2.96e-18!63;UBERON:0003080!1.64e-16!40;UBERON:0002346!3.65e-16!71;UBERON:0003075!3.65e-16!71;UBERON:0007284!3.65e-16!71;UBERON:0002791!4.45e-16!29;UBERON:0003528!4.45e-16!29;UBERON:0001893!4.45e-16!29;UBERON:0002780!5.54e-16!39;UBERON:0001890!5.54e-16!39;UBERON:0006240!5.54e-16!39;UBERON:0003056!2.87e-14!49;UBERON:0000956!1.44e-11!21;UBERON:0001869!1.44e-11!21;UBERON:0000203!1.44e-11!21;UBERON:0002619!3.97e-09!17;UBERON:0000153!1.11e-08!94;UBERON:0007811!8.63e-08!86;UBERON:0004111!2.42e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.10e-28,73;UBERON:0001016,5.40e-26,75;UBERON:0004121,4.22e-24,95;UBERON:0000924,4.22e-24,95;UBERON:0006601,4.22e-24,95;UBERON:0000073,7.08e-23,54;UBERON:0001049,1.86e-21,52;UBERON:0005068,1.86e-21,52;UBERON:0006241,1.86e-21,52;UBERON:0007135,1.86e-21,52;UBERON:0000955,3.80e-19,47;UBERON:0006238,3.80e-19,47;UBERON:0002020,1.06e-18,34;UBERON:0002346,1.41e-18,64;UBERON:0003075,1.41e-18,64;UBERON:0007284,1.41e-18,64;UBERON:0002616,1.68e-18,46;UBERON:0010371,2.06e-18,73;UBERON:0003080,1.85e-16,40;UBERON:0003528,3.01e-16,29;UBERON:0002791,3.01e-16,29;UBERON:0001893,3.01e-16,29;UBERON:0002780,6.29e-16,39;UBERON:0001890,6.29e-16,39;UBERON:0006240,6.29e-16,39;UBERON:0003056,3.16e-14,49;UBERON:0010314,1.55e-13,92;UBERON:0000956,1.10e-11,21;UBERON:0001869,1.10e-11,21;UBERON:0000203,1.10e-11,21;UBERON:0002619,3.24e-09,17;UBERON:0004111,3.42e-07,122 | |||
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| ||
|short_description=p2@Aph1b | |short_description=p2@Aph1b | ||
}} | }} |
Revision as of 14:00, 13 November 2012
Short description: | p2@Aph1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aph1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000034934_5end |
EntrezGene: | Aph1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.71e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-14 | 23 |
ectodermal cell | 5.37e-14 | 44 |
neurectodermal cell | 5.37e-14 | 44 |
neural cell | 9.16e-14 | 43 |
neuron | 2.33e-13 | 33 |
neuronal stem cell | 2.33e-13 | 33 |
neuroblast | 2.33e-13 | 33 |
electrically signaling cell | 2.33e-13 | 33 |
electrically responsive cell | 3.56e-12 | 39 |
electrically active cell | 3.56e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.10e-28 | 73 |
nervous system | 5.40e-26 | 75 |
ectoderm-derived structure | 4.22e-24 | 95 |
ectoderm | 4.22e-24 | 95 |
presumptive ectoderm | 4.22e-24 | 95 |
regional part of nervous system | 7.08e-23 | 54 |
neural tube | 1.86e-21 | 52 |
neural rod | 1.86e-21 | 52 |
future spinal cord | 1.86e-21 | 52 |
neural keel | 1.86e-21 | 52 |
brain | 3.80e-19 | 47 |
future brain | 3.80e-19 | 47 |
gray matter | 1.06e-18 | 34 |
neurectoderm | 1.41e-18 | 64 |
neural plate | 1.41e-18 | 64 |
presumptive neural plate | 1.41e-18 | 64 |
regional part of brain | 1.68e-18 | 46 |
ecto-epithelium | 2.06e-18 | 73 |
anterior neural tube | 1.85e-16 | 40 |
brain grey matter | 3.01e-16 | 29 |
regional part of telencephalon | 3.01e-16 | 29 |
telencephalon | 3.01e-16 | 29 |
regional part of forebrain | 6.29e-16 | 39 |
forebrain | 6.29e-16 | 39 |
future forebrain | 6.29e-16 | 39 |
pre-chordal neural plate | 3.16e-14 | 49 |
structure with developmental contribution from neural crest | 1.55e-13 | 92 |
cerebral cortex | 1.10e-11 | 21 |
cerebral hemisphere | 1.10e-11 | 21 |
pallium | 1.10e-11 | 21 |
regional part of cerebral cortex | 3.24e-09 | 17 |
anatomical conduit | 3.42e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.