FFCP PHASE1:Mm9::chr19:46647586..46647697,-: Difference between revisions
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|id=chr19:46647586..46647697,- | |id=chr19:46647586..46647697,- | ||
|ontology_enrichment_celltype=CL:0000117!2.00e-12!23;CL:0000337!2.00e-12!23;CL:0000221!2.96e-11!44;CL:0000133!2.96e-11!44;CL:0002319!3.02e-11!43;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33;CL:0000055!5.39e-08!50 | |ontology_enrichment_celltype=CL:0000117!2.00e-12!23;CL:0000337!2.00e-12!23;CL:0000221!2.96e-11!44;CL:0000133!2.96e-11!44;CL:0002319!3.02e-11!43;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33;CL:0000055!5.39e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-12,23;CL:0000337,2.00e-12,23;CL:0000221,2.96e-11,44;CL:0000133,2.96e-11,44;CL:0002319,3.02e-11,43;CL:0000540,5.04e-08,33;CL:0000047,5.04e-08,33;CL:0000031,5.04e-08,33;CL:0000404,5.04e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.90e-24!73;UBERON:0005743!5.90e-24!73;UBERON:0000073!7.20e-24!75;UBERON:0001016!7.20e-24!75;UBERON:0000033!5.77e-23!63;UBERON:0001049!3.18e-22!52;UBERON:0005068!3.18e-22!52;UBERON:0006241!3.18e-22!52;UBERON:0007135!3.18e-22!52;UBERON:0000955!1.94e-21!50;UBERON:0006238!1.94e-21!50;UBERON:0002616!6.00e-21!49;UBERON:0002346!1.32e-20!71;UBERON:0003075!1.32e-20!71;UBERON:0007284!1.32e-20!71;UBERON:0004121!4.29e-20!102;UBERON:0000924!4.29e-20!102;UBERON:0006601!4.29e-20!102;UBERON:0003056!1.50e-17!49;UBERON:0002020!1.07e-15!34;UBERON:0003080!1.25e-15!40;UBERON:0002780!4.30e-15!39;UBERON:0001890!4.30e-15!39;UBERON:0006240!4.30e-15!39;UBERON:0000025!1.73e-13!114;UBERON:0002791!2.99e-13!29;UBERON:0003528!2.99e-13!29;UBERON:0001893!2.99e-13!29;UBERON:0004111!5.19e-13!122;UBERON:0007811!5.68e-11!86;UBERON:0000153!1.18e-09!94;UBERON:0000956!5.46e-09!21;UBERON:0001869!5.46e-09!21;UBERON:0000203!5.46e-09!21;UBERON:0002619!8.84e-08!17;UBERON:0003076!2.36e-07!12;UBERON:0003057!2.36e-07!12;UBERON:0003103!7.56e-07!43 | |ontology_enrichment_uberon=UBERON:0001017!5.90e-24!73;UBERON:0005743!5.90e-24!73;UBERON:0000073!7.20e-24!75;UBERON:0001016!7.20e-24!75;UBERON:0000033!5.77e-23!63;UBERON:0001049!3.18e-22!52;UBERON:0005068!3.18e-22!52;UBERON:0006241!3.18e-22!52;UBERON:0007135!3.18e-22!52;UBERON:0000955!1.94e-21!50;UBERON:0006238!1.94e-21!50;UBERON:0002616!6.00e-21!49;UBERON:0002346!1.32e-20!71;UBERON:0003075!1.32e-20!71;UBERON:0007284!1.32e-20!71;UBERON:0004121!4.29e-20!102;UBERON:0000924!4.29e-20!102;UBERON:0006601!4.29e-20!102;UBERON:0003056!1.50e-17!49;UBERON:0002020!1.07e-15!34;UBERON:0003080!1.25e-15!40;UBERON:0002780!4.30e-15!39;UBERON:0001890!4.30e-15!39;UBERON:0006240!4.30e-15!39;UBERON:0000025!1.73e-13!114;UBERON:0002791!2.99e-13!29;UBERON:0003528!2.99e-13!29;UBERON:0001893!2.99e-13!29;UBERON:0004111!5.19e-13!122;UBERON:0007811!5.68e-11!86;UBERON:0000153!1.18e-09!94;UBERON:0000956!5.46e-09!21;UBERON:0001869!5.46e-09!21;UBERON:0000203!5.46e-09!21;UBERON:0002619!8.84e-08!17;UBERON:0003076!2.36e-07!12;UBERON:0003057!2.36e-07!12;UBERON:0003103!7.56e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.70e-26,92;UBERON:0001017,5.90e-24,73;UBERON:0001016,7.20e-24,75;UBERON:0000073,1.26e-23,54;UBERON:0002346,1.47e-23,64;UBERON:0003075,1.47e-23,64;UBERON:0007284,1.47e-23,64;UBERON:0001049,3.18e-22,52;UBERON:0005068,3.18e-22,52;UBERON:0006241,3.18e-22,52;UBERON:0007135,3.18e-22,52;UBERON:0004121,4.20e-22,95;UBERON:0000924,4.20e-22,95;UBERON:0006601,4.20e-22,95;UBERON:0000955,2.07e-19,47;UBERON:0006238,2.07e-19,47;UBERON:0010371,3.96e-19,73;UBERON:0002616,6.28e-19,46;UBERON:0003056,1.50e-17,49;UBERON:0002020,1.07e-15,34;UBERON:0003080,1.25e-15,40;UBERON:0002780,4.30e-15,39;UBERON:0001890,4.30e-15,39;UBERON:0006240,4.30e-15,39;UBERON:0000025,1.73e-13,114;UBERON:0003528,2.99e-13,29;UBERON:0002791,2.99e-13,29;UBERON:0001893,2.99e-13,29;UBERON:0004111,5.18e-13,122;UBERON:0000956,5.46e-09,21;UBERON:0001869,5.46e-09,21;UBERON:0000203,5.46e-09,21;UBERON:0002619,8.84e-08,17;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12;UBERON:0003103,7.56e-07,43 | |||
|phase1_expression=21.780243206252,2.44282785347553,5.45999087267443,2.41971369045464,0.500895729946347,3.69334398206158,4.20502753071946,5.68142623142936,4.78681655315667,4.21316147379588,10.7867319982068,8.85470964848234,3.93761678841773,3.3219752919219,4.66353666541928,5.4668322195253,4.89693314689703,4.57420139769445,4.11343300817216,5.51706547337439,75.7735715246032,8.14185799847259,5.22399578277871,5.43974237497583,4.81759490241057,1.72269589234506,2.15380998079537,5.60225204983311,3.42042155021473,3.02436155711917,3.76941868114018,6.35030673459631,12.3012957516914,31.6963362030877,3.17736781726402,5.31950865147176,4.69589519403449,10.8818223991596,7.0320181007142,10.9939986234498,18.2351761289614,16.3930916390027,18.934903768215,8.05739635043695,8.61703915365874,18.1711284640065,59.461742170451,92.0066159925484,55.1412318663524,59.4955491167307,65.7936181639204,60.3760770332881,5.36904339384756,0.725362142011344,4.7053131879945,20.0662360108039,18.6246735960192,22.17389996793,70.40612837914,58.1890077199236,92.5393849119022,34.5621422710515,51.5790981744461,22.9474427906757,25.7105254267413,30.5506449426823,38.6484142568742,61.4749288514487,38.8836046156791,40.5017814995072,39.1204428113571,74.5549069293927,68.027510613097,50.8336816742059,62.1078652198172,59.7492211296514,71.5753226496027,109.555736077091,113.66883460962,70.2953913601933,87.0047490658916,75.0115253601734,101.901794635504,81.0378158445619,76.8575186317355,64.8182888042069,57.0910440004403,58.1566270974938,27.7157867599454,28.8683359607921,14.4932244350839,7.74381489283248,23.1190253460635,25.3660500069774,14.2950811838487,27.7776670000348,45.9253253830829,27.4392819350673,25.4590284510811,41.6940697922201,29.9996484124329,12.8326477414318,20.3844191765317,14.2213340630666,24.246996593256,19.5087096415826,16.6823066854878,27.1757633731363,11.1343289968284,27.3133535879278,19.2568712710411,15.8322048722313,21.6778567420695,23.6634545667617,15.7568867561844,21.3633205260448,11.8653584512499,44.8258006451726,16.8076004870476,24.912094891901,29.3719219552323,26.183263669302,16.775258509631,66.1684601246097,56.9695042532598,8.43008282188352,3.95389910869537,7.19883277192089,3.43089613097275,68.454322208004,114.375150704657,33.6753663662477,87.2598087365228,83.6189545470181,81.0373373782284,67.1678829100517,14.9703864859965,20.7759640918855,42.710146175291,58.5028359364398,35.6530013717808,32.8760009339866,42.8547868936731,31.6480117455002,30.5483881189462,29.7223831060852,39.1673208659667,101.670424700433,31.0417909823293,24.3946843416487,27.448375369576,19.2892244536266,18.6291656981151,18.1091126591527,18.314610140307,22.2918378836712,4.91549231119264,3.08817488537658,2.55747149456033,42.0465318247069,33.7717526372778,48.976880717396,44.2712655544343,49.7813506320932,54.9190921879067,56.0406806848483,58.483601505117,63.7538769324745,41.3045223282836,39.4001913789829,50.3437307279764,49.5617957371877,46.5446244417027,54.8904252729921,68.9751031290337,26.1377715443382,6.93879444265976,5.02456076660734,22.1819780556643,19.9723537799977,15.8506977426175,15.327947871374,12.8979265430025,16.9300807240178,6.64340686162316,10.0466362381647,10.0534083520108,11.1415624343044,11.1129529657898,6.29173586057955,8.21324589523838,7.36822711041159,33.1918826667893,26.8484004632863,15.7790829942313,37.8791469792285,34.717495203005,31.8416622302046,36.4242453835722,47.3828575014523,46.7856208967297,42.4486243890994,15.1190839814446,18.1861165230543,16.9040735797355,14.6160373050155,14.4030686185837,16.8824011826692,17.0599320693551,19.5633373466551,10.8630601939274,15.9245619649087,15.814502718009,12.2806512730606,14.6657706363843,16.4176270665623,24.9362404795458,19.7801843758981,32.8860678496556,21.9810037653762,27.0521860893763,22.4063513223248,31.4484932706593,30.8211513692941,33.0880660831559,21.6598349122157,22.8570958953977,21.9250042752287,19.4534817762134,27.529036872244,24.6939524068231,22.2759550215528,9.04747703635634,7.61467957346193,14.7529281905711,11.5893433447988,81.5596997137983,69.9753768955453,40.1640616172855,67.1572666363632,27.1337068697981,25.3785183792815,22.6194567619439,17.9226598464414,20.0518806674155,19.5322806244294,14.5731852602962,18.704374906324,22.1361155650053,58.8018009051907,19.019971417908,21.1898068364034,14.0082785044075,19.4664745107592,49.1157011857862,27.4342118855129,28.1160907977218,45.2652191414155,50.2013217897314,52.2639751504677,17.8315522286073,22.5390912276053,25.6678112436999,45.8253299006933,40.0590712584995,45.3796390292022,46.9806655940227,31.8708136435419,26.6478888592474,28.5068256592018,37.7734697658043,34.7819194324038,37.6817257178857,40.4938382322417,10.3255551548033,19.7003825903353,29.3302769413099,23.2489616647487,12.1098320021929,18.0335645535186,16.9508728484454,20.0251897688975,11.9507143018239,82.5142593946768,8.54354403989263,21.4642342681751,14.0747840800981,6.59289599516419,8.06495943554049,10.5237959675,8.15896463970505,7.13752406850656,6.49539876880792,38.1868247206045,20.5618395827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| ||
|short_description=p1@Arl3 | |short_description=p1@Arl3 | ||
}} | }} |
Revision as of 13:25, 13 November 2012
Short description: | p1@Arl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -11bp_to_ENSMUST00000026009, NM_019718, uc008htt.1_5end |
EntrezGene: | Arl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.00e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.00e-12 | 23 |
ectodermal cell | 2.96e-11 | 44 |
neurectodermal cell | 2.96e-11 | 44 |
neural cell | 3.02e-11 | 43 |
neuron | 5.04e-08 | 33 |
neuronal stem cell | 5.04e-08 | 33 |
neuroblast | 5.04e-08 | 33 |
electrically signaling cell | 5.04e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.