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FFCP PHASE1:Mm9::chr13:111071199..111071245,-: Difference between revisions

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|id=chr13:111071199..111071245,-
|id=chr13:111071199..111071245,-
|ontology_enrichment_celltype=CL:0000117!2.73e-14!23;CL:0000337!2.73e-14!23;CL:0000540!1.25e-09!33;CL:0000047!1.25e-09!33;CL:0000031!1.25e-09!33;CL:0000404!1.25e-09!33;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39
|ontology_enrichment_celltype=CL:0000117!2.73e-14!23;CL:0000337!2.73e-14!23;CL:0000540!1.25e-09!33;CL:0000047!1.25e-09!33;CL:0000031!1.25e-09!33;CL:0000404!1.25e-09!33;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-16,23;CL:0000337,9.71e-16,23;CL:0000540,1.71e-08,33;CL:0000047,1.71e-08,33;CL:0000031,1.71e-08,33;CL:0000404,1.71e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.89e-16!71;UBERON:0003075!2.89e-16!71;UBERON:0007284!2.89e-16!71;UBERON:0001049!1.50e-14!52;UBERON:0005068!1.50e-14!52;UBERON:0006241!1.50e-14!52;UBERON:0007135!1.50e-14!52;UBERON:0001017!8.73e-14!73;UBERON:0005743!8.73e-14!73;UBERON:0000073!1.14e-13!75;UBERON:0001016!1.14e-13!75;UBERON:0000955!8.26e-13!50;UBERON:0006238!8.26e-13!50;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0002616!2.35e-12!49;UBERON:0000033!6.28e-11!63;UBERON:0003080!2.08e-10!40;UBERON:0002020!3.11e-10!34;UBERON:0002780!8.03e-10!39;UBERON:0001890!8.03e-10!39;UBERON:0006240!8.03e-10!39;UBERON:0003056!1.14e-09!49;UBERON:0002791!4.01e-07!29;UBERON:0003528!4.01e-07!29;UBERON:0001893!4.01e-07!29;UBERON:0002420!7.73e-07!8;UBERON:0007245!7.73e-07!8;UBERON:0010009!7.73e-07!8;UBERON:0010011!7.73e-07!8;UBERON:0000454!7.73e-07!8
|ontology_enrichment_uberon=UBERON:0002346!2.89e-16!71;UBERON:0003075!2.89e-16!71;UBERON:0007284!2.89e-16!71;UBERON:0001049!1.50e-14!52;UBERON:0005068!1.50e-14!52;UBERON:0006241!1.50e-14!52;UBERON:0007135!1.50e-14!52;UBERON:0001017!8.73e-14!73;UBERON:0005743!8.73e-14!73;UBERON:0000073!1.14e-13!75;UBERON:0001016!1.14e-13!75;UBERON:0000955!8.26e-13!50;UBERON:0006238!8.26e-13!50;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0002616!2.35e-12!49;UBERON:0000033!6.28e-11!63;UBERON:0003080!2.08e-10!40;UBERON:0002020!3.11e-10!34;UBERON:0002780!8.03e-10!39;UBERON:0001890!8.03e-10!39;UBERON:0006240!8.03e-10!39;UBERON:0003056!1.14e-09!49;UBERON:0002791!4.01e-07!29;UBERON:0003528!4.01e-07!29;UBERON:0001893!4.01e-07!29;UBERON:0002420!7.73e-07!8;UBERON:0007245!7.73e-07!8;UBERON:0010009!7.73e-07!8;UBERON:0010011!7.73e-07!8;UBERON:0000454!7.73e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.31e-17,54;UBERON:0001049,8.78e-16,52;UBERON:0005068,8.78e-16,52;UBERON:0006241,8.78e-16,52;UBERON:0007135,8.78e-16,52;UBERON:0001017,4.74e-14,73;UBERON:0001016,2.99e-13,75;UBERON:0002346,5.96e-13,64;UBERON:0003075,5.96e-13,64;UBERON:0007284,5.96e-13,64;UBERON:0000955,1.20e-11,47;UBERON:0006238,1.20e-11,47;UBERON:0002616,4.02e-11,46;UBERON:0002020,1.01e-10,34;UBERON:0003080,2.56e-10,40;UBERON:0010371,1.17e-09,73;UBERON:0002780,1.25e-09,39;UBERON:0001890,1.25e-09,39;UBERON:0006240,1.25e-09,39;UBERON:0004121,3.02e-09,95;UBERON:0000924,3.02e-09,95;UBERON:0006601,3.02e-09,95;UBERON:0010314,3.76e-09,92;UBERON:0003056,3.90e-09,49;UBERON:0002420,2.48e-08,8;UBERON:0007245,2.48e-08,8;UBERON:0010009,2.48e-08,8;UBERON:0010011,2.48e-08,8;UBERON:0000454,2.48e-08,8;UBERON:0002240,3.90e-07,6;UBERON:0005174,3.90e-07,6;UBERON:0001137,3.90e-07,6;UBERON:0003528,4.98e-07,29;UBERON:0002791,4.98e-07,29;UBERON:0001893,4.98e-07,29
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,2.01455126294268,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,1.75991665072747,0.91763712426868,0,0.86152399231815,0.215471232685889,0.570070258369122,1.00812051903972,0.221730510655305,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,15.1737345644698,22.7466121086974,13.3104594736298,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,0.841299845405528,6.28432165688368,8.39300455616131,2.32732518508413,2.39613677545591,3.67687514644008,5.50579404996943,5.49055553766307,5.06901559745603,11.6059933202571,10.9785172322892,7.8137005583514,5.58365998002762,4.50210088025344,7.02871939773326,14.4368006882097,18.3659468230843,13.6071595452469,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,4.60170631100957,1.56136794089522,3.34912026143355,1.84492397804847,4.06951129492081,4.8211369925639,3.14166478324189,0.247194967734374,0.289198713839823,0,0,0,0,1.86391761218122,1.17112318804619,1.25668024088073,1.02182822083437,0,0,0,6.44099749440738,4.11750542536764,9.5497307605777,2.25971616249959,2.30143911597297,7.48036960414416,5.51620294430376,0,0,0.505445516867349,0,0,0,0.720248519221397,2.41127708537144,1.02054748726992,1.40925092313335,1.12442069471675,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.92614151141356,0.660837565967596,0.528901133327089,0,0.232236671860439,0.515469845288373,1.00841762311671,0.667134131534611,3.04361001780095,0.949058123089023,1.97638745668813,0.502670417600539,0.795825888164603,0.779856348476481,0.898819408654221,1.29682829924817,1.1948476395262,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,3.8798169934987,0.568474235311454,0.651859905768103,1.35796068620151,1.64283173801951,3.01511263395268,1.90434912708811,3.70753930929818,0.315270288212382,0.44292937929755,0.318909537314974,5.57135270033509,2.76295970985433,7.95569822198314,0,0,0,0,5.45872005958493,5.86058432961016,1.47541450839008,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,3.21321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0.754420319023592,0.295301892880773,0,0.258428293168221,1.45413491791002,0,0.316036757935816,0,0,9.19186935535228,0,0.258717367565509,0.428674070063185,4.78818630834139,4.28085162244969,3.45552943264454,1.8267896946876,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,1.1659233465194,6.48988557036784,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.432021363287205,0.836353184057875,0.87345025498471,0.809186078308924,1.32245529160537,1.83229159388821,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0,2.30162618253588,1.71868654031819,2.23409137046794,1.37016503954128,1.5107877947794,0,0.45032120322422,3.17199686288943,1.03552062350364,0.207574695168353,3.59122386060928,2.73173769206615,2.67417388775123,5.65955539095552,2.94149613520023,2.44471400581777,1.85431551515005,3.85103051510178,2.52697211763797,3.29523089857312,4.71565853465191,3.183811253976,2.68905640100451,2.98664438569189,1.42888107384922,3.24476112645595,2.12200142510076,2.47251540481984,3.09117732282234,4.11443102862498,3.19456451086807,3.81497903915713,4.50573891560218,3.29382831453657,3.04612588410035,2.56099162021882,2.63069711437843,3.25929873230068,4.48913817326191,1.66089025373844,2.9551344712669,2.04615521584845,3.09873682371932,3.08650577569826,4.99621155875892,2.57324769289949,1.93383948643468,1.91288332068843,0.882365676478062,1.15933917810211
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,2.01455126294268,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,1.75991665072747,0.91763712426868,0,0.86152399231815,0.215471232685889,0.570070258369122,1.00812051903972,0.221730510655305,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,15.1737345644698,22.7466121086974,13.3104594736298,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,0.841299845405528,6.28432165688368,8.39300455616131,2.32732518508413,2.39613677545591,3.67687514644008,5.50579404996943,5.49055553766307,5.06901559745603,11.6059933202571,10.9785172322892,7.8137005583514,5.58365998002762,4.50210088025344,7.02871939773326,14.4368006882097,18.3659468230843,13.6071595452469,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,4.60170631100957,1.56136794089522,3.34912026143355,1.84492397804847,4.06951129492081,4.8211369925639,3.14166478324189,0.247194967734374,0.289198713839823,0,0,0,0,1.86391761218122,1.17112318804619,1.25668024088073,1.02182822083437,0,0,0,6.44099749440738,4.11750542536764,9.5497307605777,2.25971616249959,2.30143911597297,7.48036960414416,5.51620294430376,0,0,0.505445516867349,0,0,0,0.720248519221397,2.41127708537144,1.02054748726992,1.40925092313335,1.12442069471675,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.92614151141356,0.660837565967596,0.528901133327089,0,0.232236671860439,0.515469845288373,1.00841762311671,0.667134131534611,3.04361001780095,0.949058123089023,1.97638745668813,0.502670417600539,0.795825888164603,0.779856348476481,0.898819408654221,1.29682829924817,1.1948476395262,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,3.8798169934987,0.568474235311454,0.651859905768103,1.35796068620151,1.64283173801951,3.01511263395268,1.90434912708811,3.70753930929818,0.315270288212382,0.44292937929755,0.318909537314974,5.57135270033509,2.76295970985433,7.95569822198314,0,0,0,0,5.45872005958493,5.86058432961016,1.47541450839008,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,3.21321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0.754420319023592,0.295301892880773,0,0.258428293168221,1.45413491791002,0,0.316036757935816,0,0,9.19186935535228,0,0.258717367565509,0.428674070063185,4.78818630834139,4.28085162244969,3.45552943264454,1.8267896946876,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,1.1659233465194,6.48988557036784,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.432021363287205,0.836353184057875,0.87345025498471,0.809186078308924,1.32245529160537,1.83229159388821,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0,2.30162618253588,1.71868654031819,2.23409137046794,1.37016503954128,1.5107877947794,0,0.45032120322422,3.17199686288943,1.03552062350364,0.207574695168353,3.59122386060928,2.73173769206615,2.67417388775123,5.65955539095552,2.94149613520023,2.44471400581777,1.85431551515005,3.85103051510178,2.52697211763797,3.29523089857312,4.71565853465191,3.183811253976,2.68905640100451,2.98664438569189,1.42888107384922,3.24476112645595,2.12200142510076,2.47251540481984,3.09117732282234,4.11443102862498,3.19456451086807,3.81497903915713,4.50573891560218,3.29382831453657,3.04612588410035,2.56099162021882,2.63069711437843,3.25929873230068,4.48913817326191,1.66089025373844,2.9551344712669,2.04615521584845,3.09873682371932,3.08650577569826,4.99621155875892,2.57324769289949,1.93383948643468,1.91288332068843,0.882365676478062,1.15933917810211
|short_description=p2@Rab3c
|short_description=p2@Rab3c
}}
}}

Revision as of 13:04, 13 November 2012

Short description:p2@Rab3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab3c_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: 0bp_to_uc007rvp.2_5end
EntrezGene:Rab3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.17
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H27.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.71e-1623
neuroblast (sensu Vertebrata)9.71e-1623
neuron1.71e-0833
neuronal stem cell1.71e-0833
neuroblast1.71e-0833
electrically signaling cell1.71e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.31e-1754
neural tube8.78e-1652
neural rod8.78e-1652
future spinal cord8.78e-1652
neural keel8.78e-1652
central nervous system4.74e-1473
nervous system2.99e-1375
neurectoderm5.96e-1364
neural plate5.96e-1364
presumptive neural plate5.96e-1364
brain1.20e-1147
future brain1.20e-1147
regional part of brain4.02e-1146
gray matter1.01e-1034
anterior neural tube2.56e-1040
ecto-epithelium1.17e-0973
regional part of forebrain1.25e-0939
forebrain1.25e-0939
future forebrain1.25e-0939
ectoderm-derived structure3.02e-0995
ectoderm3.02e-0995
presumptive ectoderm3.02e-0995
structure with developmental contribution from neural crest3.76e-0992
pre-chordal neural plate3.90e-0949
basal ganglion2.48e-088
nuclear complex of neuraxis2.48e-088
aggregate regional part of brain2.48e-088
collection of basal ganglia2.48e-088
cerebral subcortex2.48e-088
spinal cord3.90e-076
dorsal region element3.90e-076
dorsum3.90e-076
brain grey matter4.98e-0729
regional part of telencephalon4.98e-0729
telencephalon4.98e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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