FFCP PHASE1:Mm9::chrX:90920427..90920500,+: Difference between revisions
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|id=chrX:90920427..90920500,+ | |id=chrX:90920427..90920500,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.74e-14!23;CL:0000337!6.74e-14!23;CL:0000540!1.00e-12!33;CL:0000047!1.00e-12!33;CL:0000031!1.00e-12!33;CL:0000404!1.00e-12!33;CL:0000393!1.58e-11!39;CL:0000211!1.58e-11!39;CL:0000221!1.78e-08!44;CL:0000133!1.78e-08!44;CL:0002319!3.12e-08!43;CL:0000055!3.61e-07!50 | |ontology_enrichment_celltype=CL:0000117!6.74e-14!23;CL:0000337!6.74e-14!23;CL:0000540!1.00e-12!33;CL:0000047!1.00e-12!33;CL:0000031!1.00e-12!33;CL:0000404!1.00e-12!33;CL:0000393!1.58e-11!39;CL:0000211!1.58e-11!39;CL:0000221!1.78e-08!44;CL:0000133!1.78e-08!44;CL:0002319!3.12e-08!43;CL:0000055!3.61e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.63e-15,23;CL:0000337,7.63e-15,23;CL:0000540,1.39e-13,33;CL:0000047,1.39e-13,33;CL:0000031,1.39e-13,33;CL:0000404,1.39e-13,33;CL:0000393,7.48e-12,39;CL:0000211,7.48e-12,39;CL:0000221,1.10e-08,44;CL:0000133,1.10e-08,44;CL:0002319,2.01e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.19e-21!73;UBERON:0005743!6.19e-21!73;UBERON:0000073!3.60e-20!75;UBERON:0001016!3.60e-20!75;UBERON:0002346!1.10e-19!71;UBERON:0003075!1.10e-19!71;UBERON:0007284!1.10e-19!71;UBERON:0001049!3.01e-19!52;UBERON:0005068!3.01e-19!52;UBERON:0006241!3.01e-19!52;UBERON:0007135!3.01e-19!52;UBERON:0000033!3.39e-19!63;UBERON:0000955!6.20e-18!50;UBERON:0006238!6.20e-18!50;UBERON:0003056!1.95e-17!49;UBERON:0002616!2.21e-17!49;UBERON:0004121!2.15e-16!102;UBERON:0000924!2.15e-16!102;UBERON:0006601!2.15e-16!102;UBERON:0003080!1.97e-15!40;UBERON:0002020!4.65e-15!34;UBERON:0002780!7.20e-15!39;UBERON:0001890!7.20e-15!39;UBERON:0006240!7.20e-15!39;UBERON:0002791!2.08e-12!29;UBERON:0003528!2.08e-12!29;UBERON:0001893!2.08e-12!29;UBERON:0007811!9.31e-09!86;UBERON:0000153!1.63e-08!94;UBERON:0000956!2.20e-08!21;UBERON:0001869!2.20e-08!21;UBERON:0000203!2.20e-08!21;UBERON:0000025!5.21e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!6.19e-21!73;UBERON:0005743!6.19e-21!73;UBERON:0000073!3.60e-20!75;UBERON:0001016!3.60e-20!75;UBERON:0002346!1.10e-19!71;UBERON:0003075!1.10e-19!71;UBERON:0007284!1.10e-19!71;UBERON:0001049!3.01e-19!52;UBERON:0005068!3.01e-19!52;UBERON:0006241!3.01e-19!52;UBERON:0007135!3.01e-19!52;UBERON:0000033!3.39e-19!63;UBERON:0000955!6.20e-18!50;UBERON:0006238!6.20e-18!50;UBERON:0003056!1.95e-17!49;UBERON:0002616!2.21e-17!49;UBERON:0004121!2.15e-16!102;UBERON:0000924!2.15e-16!102;UBERON:0006601!2.15e-16!102;UBERON:0003080!1.97e-15!40;UBERON:0002020!4.65e-15!34;UBERON:0002780!7.20e-15!39;UBERON:0001890!7.20e-15!39;UBERON:0006240!7.20e-15!39;UBERON:0002791!2.08e-12!29;UBERON:0003528!2.08e-12!29;UBERON:0001893!2.08e-12!29;UBERON:0007811!9.31e-09!86;UBERON:0000153!1.63e-08!94;UBERON:0000956!2.20e-08!21;UBERON:0001869!2.20e-08!21;UBERON:0000203!2.20e-08!21;UBERON:0000025!5.21e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.63e-22,64;UBERON:0003075,1.63e-22,64;UBERON:0007284,1.63e-22,64;UBERON:0001017,4.64e-22,73;UBERON:0001016,3.54e-21,75;UBERON:0000073,5.25e-21,54;UBERON:0001049,5.15e-20,52;UBERON:0005068,5.15e-20,52;UBERON:0006241,5.15e-20,52;UBERON:0007135,5.15e-20,52;UBERON:0004121,1.48e-18,95;UBERON:0000924,1.48e-18,95;UBERON:0006601,1.48e-18,95;UBERON:0003056,3.24e-18,49;UBERON:0010371,4.48e-18,73;UBERON:0000955,6.41e-17,47;UBERON:0006238,6.41e-17,47;UBERON:0002616,2.42e-16,46;UBERON:0003080,4.78e-16,40;UBERON:0002020,1.28e-15,34;UBERON:0002780,1.91e-15,39;UBERON:0001890,1.91e-15,39;UBERON:0006240,1.91e-15,39;UBERON:0003528,8.81e-13,29;UBERON:0002791,8.81e-13,29;UBERON:0001893,8.81e-13,29;UBERON:0010314,4.09e-12,92;UBERON:0000956,1.75e-08,21;UBERON:0001869,1.75e-08,21;UBERON:0000203,1.75e-08,21;UBERON:0000025,3.99e-07,114 | |||
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| ||
|short_description=p1@Pcyt1b | |short_description=p1@Pcyt1b | ||
}} | }} |
Revision as of 11:58, 13 November 2012
Short description: | p1@Pcyt1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcyt1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:883 |
Association with transcript: | 0bp_to_ENSMUST00000045898, NM_211138, uc009tsw.1_5end |
EntrezGene: | Pcyt1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.63e-15 | 23 |
neuroblast (sensu Vertebrata) | 7.63e-15 | 23 |
neuron | 1.39e-13 | 33 |
neuronal stem cell | 1.39e-13 | 33 |
neuroblast | 1.39e-13 | 33 |
electrically signaling cell | 1.39e-13 | 33 |
electrically responsive cell | 7.48e-12 | 39 |
electrically active cell | 7.48e-12 | 39 |
ectodermal cell | 1.10e-08 | 44 |
neurectodermal cell | 1.10e-08 | 44 |
neural cell | 2.01e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.63e-22 | 64 |
neural plate | 1.63e-22 | 64 |
presumptive neural plate | 1.63e-22 | 64 |
central nervous system | 4.64e-22 | 73 |
nervous system | 3.54e-21 | 75 |
regional part of nervous system | 5.25e-21 | 54 |
neural tube | 5.15e-20 | 52 |
neural rod | 5.15e-20 | 52 |
future spinal cord | 5.15e-20 | 52 |
neural keel | 5.15e-20 | 52 |
ectoderm-derived structure | 1.48e-18 | 95 |
ectoderm | 1.48e-18 | 95 |
presumptive ectoderm | 1.48e-18 | 95 |
pre-chordal neural plate | 3.24e-18 | 49 |
ecto-epithelium | 4.48e-18 | 73 |
brain | 6.41e-17 | 47 |
future brain | 6.41e-17 | 47 |
regional part of brain | 2.42e-16 | 46 |
anterior neural tube | 4.78e-16 | 40 |
gray matter | 1.28e-15 | 34 |
regional part of forebrain | 1.91e-15 | 39 |
forebrain | 1.91e-15 | 39 |
future forebrain | 1.91e-15 | 39 |
brain grey matter | 8.81e-13 | 29 |
regional part of telencephalon | 8.81e-13 | 29 |
telencephalon | 8.81e-13 | 29 |
structure with developmental contribution from neural crest | 4.09e-12 | 92 |
cerebral cortex | 1.75e-08 | 21 |
cerebral hemisphere | 1.75e-08 | 21 |
pallium | 1.75e-08 | 21 |
tube | 3.99e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.