Personal tools

MCL coexpression mm9:2647: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=0.0472696663528005,0.0340488183676232,-0.0357733735754358,0.0421625983232241,0.0621346502040465,0.306872770541556,0.373687430278217,-0.129451047359911,-0.110382640996722,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.00684761292148713,0.0307789090795012,0.0637433733368542,-0.108248482908593,-0.110849656643783,-0.0404893571161228,0.277802027186921,-0.115746829661631,-0.129451047359911,0.369684548569456,0.361261212261131,0.199622040884899,0.143728201575382,0.260365392987116,0.465335633266395,0.352702227041623,0.401071905647653,-0.0582757458556782,-0.129451047359911,-0.129451047359911,0.489994845633817,0.402322630304105,0.522017012563851,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.102725460613395,-0.105055908028675,-0.0457833592008662,-0.0227269065761073,-0.0767266605581055,-0.103730825309676,-0.0461146620160069,-0.129451047359911,-0.106997046621928,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0692492959863948,-0.102778116341747,-0.0249705263041187,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0535778876229195,-0.0823828512984765,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0276568002404444,-0.0716717786382255,-0.0977300699106135,-0.104063167921901,-0.129451047359911,-0.0219647545148532,-0.0012968088191782,-0.046954285758921,-0.0955614051238777,-0.0924528821242541,-0.129451047359911,0.0634985716843508,-0.0648200433802462,-0.0241564334138243,-0.0920693166816005,-0.0779647194227215,-0.129451047359911,-0.118883799499095,-0.118904610613984,0.466782073674676,0.274319905865304,0.344583219668332,0.0370569141649295,0.221544974828621,0.157774402622524,0.357065180620243,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.241587898149251,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.443223473448533,0.495928607881671,0.365684864002568,0.285121421165636,-0.0961162798854552,-0.0184589522027859,-0.0631724482243867,-0.0909735172549792,-0.0994102540607515,-0.0888039420573909,-0.0827805985143523,-0.112314455076606,0.206134183112313,-0.0535754277906749,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.585644023852163,-0.0922760832063672,-0.0788011231076472,0.403853412373078,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0614868431033005,-0.0043821966454365,-0.112316029093063,-0.106250012920966,-0.129451047359911,-0.129451047359911,-0.0216963093751684,0.216998632076471,0.711490800230356,1.35662623125285,0.42294148079415,-0.060550038240656,-0.0746861768725595,-0.0509206497996577,0.0257030210219605,-0.0181600021843126,-0.0459545697962574,-0.0585043777928162,0.15392513654549,0.0556080861857842,-0.0228343667665746,0.0248287927023768,0.0385679780739795,0.0322115319015986,0.157697994263788,0.30862051124251,0.070535750234514,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0520246526156805,-0.0684508726817315,-0.0609565835461079,-0.0986910238960246,-0.103448180442594,-0.0697539112046215,-0.0991847510753238,0.0104928847954203,-0.0699874082005823,-0.129451047359911,-0.129451047359911,-0.118166601532425,-0.109697580907512,-0.129451047359911,-0.0804711150444595,-0.129451047359911,-0.129451047359911,0.111454310171701,0.230772079217286,0.197355395198309,0.299815157848773,0.333627534001678,0.338076837731251,0.274584644973139,0.341735084157507,0.207781672604696,0.328025752841051,0.391164948374932,0.292261598321055,0.273527912505989,0.184147425182933,0.355462990452654,0.336667756538526,0.341410646424325,0.299646250162676,0.338028220582472,0.29034912416498,0.373960294060729,0.364490221282902,0.359676937577021,0.29082540490928,0.373680886403044,0.459287002816396,0.0962805188055908,-0.0416334694858974,-0.0814550804987545,-0.0365752102169632,-0.0801514144120105,-0.0316849957643889,0.0186878170237932,-0.0185854113417049,-0.0435041215970417,0.0129546520578452,0.112330149981905,-0.0209169005869867,0.0517519067149368,0.0855694110770045,0.0523824733066638,0.17010940755175,0.389383003756494,0.0755031202643894,0.206247429436193,0.214530198866039,0.242617123325703,0.306538618061769,0.225291443742278,0.260316122481836,0.247022636777777,0.269880437952078,0.117982267361478,0.218651920810965,0.229480821892545,0.283733710306804,-0.129451047359911,-0.129451047359911,0.589136523514568,0.668765328318889,-2.74055994029336e-05,0.00649681758015323,-0.0715470437888433,-0.129451047359911,-0.0897531920458988,-0.0459063659625545,-0.039481646143384,-0.0984309242627138,-0.0712144079361394,-0.0284221256904238,0.0714989838077412,-0.0923348775132788,-0.0812297840146006,-0.0317398768373658,0.162029881387744,0.128604471519444,0.143828783970181,0.454575416494411,0.860669474752785,0.43670545092379,0.527601521050909,0.690180945805477,0.623003636692863,0.487700098510182,0.453969171694845,0.678762802989007,0.678986713956241,0.562527234133733,0.901972046228733,0.760058466744898,0.180787511993569,0.182632642592472,0.286769503354763,0.281069367775365,-0.0237505465296059,0.131805850444372,0.0443662460619705,0.233378593348226,0.233429189653855,0.332508668172832,1.19275594055996,0.347597269423139,0.243386362194812,0.355965807081573,0.383888692857072,0.448170114686721,0.208857066985013,0.0481561984126758,-0.0238691351500971,0.164805044247863,0.0047245758452175,-0.0231675794145585,-0.0427474318739632,-0.00437199295151477,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.836523994237178,0.220125612117017,0.506259211629819,0.441528099289916,0.497993568680121,0.58984669065486,0.59216988509342,0.674286203982657,0.723325175645966,0.348823604496866,1.08484767930177,0.195775497309362,-0.129451047359911,-0.0851198406358147,-0.103728245074538,-0.111865908306096,-0.0700926077735613,-0.0217601522238647,0.0474464365489858,-0.129451047359911,-0.0981256641720832,0.0670114734268707,-0.0896978609625421,0.371610273808678,0.294142481429894,0.143532678338842,0.12958830665359,0.0229627705580859,0.0337167567620914,-0.009154008355386,0.00119369015884083,-0.0293721240837829,-0.101638546365193,-0.0902093302987348,-0.0672641497217117,-0.0830397759050844,0.491105364812622,0.264564429584387,0.0221353385073872,0.211899380856437,0.60596790340055,0.566527688692871,0.475091566840697,0.580570910214199,1.27293417945055,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0479928526257332,-0.129451047359911,-0.129451047359911,-0.0360551176671614,-0.0690499833009192,-0.0759150405404947,-0.032234090076684,-0.00478749220243313,0.116295915631696,-0.0512183265809073,0.100133621756288,0.0586529742081761,0.0694809680925304,0.009129078391177,0.101470766842115,0.169484514409415,0.199960162115871,0.113730222178916,0.05248359172491,0.0398052196335012,-0.0730601260711828,0.0873534270885244,0.047965295783213,0.128047679435945,0.126195268207362,0.0477122007963555,0.0763472615969632,0.0460901755002197,0.161059733875323,0.112778056157266,0.0998867894595479,0.130161261955502,0.195100189128406,0.0398260426727566,0.152898854519496,0.188335712910635,0.0897773527033226,0.0564385038545883,0.0835147214039912,0.0998684734668721,0.220783186608314,0.151458979580825,0.091732315726293,-0.00695645061132441,0.141580363787747,0.023431823379135
|coexpression_dpi_cluster_scores_mean=0.0472696663528005,0.0340488183676232,-0.0357733735754358,0.0421625983232241,0.0621346502040465,0.306872770541556,0.373687430278217,-0.129451047359911,-0.110382640996722,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.00684761292148713,0.0307789090795012,0.0637433733368542,-0.108248482908593,-0.110849656643783,-0.0404893571161228,0.277802027186921,-0.115746829661631,-0.129451047359911,0.369684548569456,0.361261212261131,0.199622040884899,0.143728201575382,0.260365392987116,0.465335633266395,0.352702227041623,0.401071905647653,-0.0582757458556782,-0.129451047359911,-0.129451047359911,0.489994845633817,0.402322630304105,0.522017012563851,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.102725460613395,-0.105055908028675,-0.0457833592008662,-0.0227269065761073,-0.0767266605581055,-0.103730825309676,-0.0461146620160069,-0.129451047359911,-0.106997046621928,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0692492959863948,-0.102778116341747,-0.0249705263041187,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0535778876229195,-0.0823828512984765,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0276568002404444,-0.0716717786382255,-0.0977300699106135,-0.104063167921901,-0.129451047359911,-0.0219647545148532,-0.0012968088191782,-0.046954285758921,-0.0955614051238777,-0.0924528821242541,-0.129451047359911,0.0634985716843508,-0.0648200433802462,-0.0241564334138243,-0.0920693166816005,-0.0779647194227215,-0.129451047359911,-0.118883799499095,-0.118904610613984,0.466782073674676,0.274319905865304,0.344583219668332,0.0370569141649295,0.221544974828621,0.157774402622524,0.357065180620243,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.241587898149251,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.443223473448533,0.495928607881671,0.365684864002568,0.285121421165636,-0.0961162798854552,-0.0184589522027859,-0.0631724482243867,-0.0909735172549792,-0.0994102540607515,-0.0888039420573909,-0.0827805985143523,-0.112314455076606,0.206134183112313,-0.0535754277906749,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.585644023852163,-0.0922760832063672,-0.0788011231076472,0.403853412373078,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0614868431033005,-0.0043821966454365,-0.112316029093063,-0.106250012920966,-0.129451047359911,-0.129451047359911,-0.0216963093751684,0.216998632076471,0.711490800230356,1.35662623125285,0.42294148079415,-0.060550038240656,-0.0746861768725595,-0.0509206497996577,0.0257030210219605,-0.0181600021843126,-0.0459545697962574,-0.0585043777928162,0.15392513654549,0.0556080861857842,-0.0228343667665746,0.0248287927023768,0.0385679780739795,0.0322115319015986,0.157697994263788,0.30862051124251,0.070535750234514,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0520246526156805,-0.0684508726817315,-0.0609565835461079,-0.0986910238960246,-0.103448180442594,-0.0697539112046215,-0.0991847510753238,0.0104928847954203,-0.0699874082005823,-0.129451047359911,-0.129451047359911,-0.118166601532425,-0.109697580907512,-0.129451047359911,-0.0804711150444595,-0.129451047359911,-0.129451047359911,0.111454310171701,0.230772079217286,0.197355395198309,0.299815157848773,0.333627534001678,0.338076837731251,0.274584644973139,0.341735084157507,0.207781672604696,0.328025752841051,0.391164948374932,0.292261598321055,0.273527912505989,0.184147425182933,0.355462990452654,0.336667756538526,0.341410646424325,0.299646250162676,0.338028220582472,0.29034912416498,0.373960294060729,0.364490221282902,0.359676937577021,0.29082540490928,0.373680886403044,0.459287002816396,0.0962805188055908,-0.0416334694858974,-0.0814550804987545,-0.0365752102169632,-0.0801514144120105,-0.0316849957643889,0.0186878170237932,-0.0185854113417049,-0.0435041215970417,0.0129546520578452,0.112330149981905,-0.0209169005869867,0.0517519067149368,0.0855694110770045,0.0523824733066638,0.17010940755175,0.389383003756494,0.0755031202643894,0.206247429436193,0.214530198866039,0.242617123325703,0.306538618061769,0.225291443742278,0.260316122481836,0.247022636777777,0.269880437952078,0.117982267361478,0.218651920810965,0.229480821892545,0.283733710306804,-0.129451047359911,-0.129451047359911,0.589136523514568,0.668765328318889,-2.74055994029336e-05,0.00649681758015323,-0.0715470437888433,-0.129451047359911,-0.0897531920458988,-0.0459063659625545,-0.039481646143384,-0.0984309242627138,-0.0712144079361394,-0.0284221256904238,0.0714989838077412,-0.0923348775132788,-0.0812297840146006,-0.0317398768373658,0.162029881387744,0.128604471519444,0.143828783970181,0.454575416494411,0.860669474752785,0.43670545092379,0.527601521050909,0.690180945805477,0.623003636692863,0.487700098510182,0.453969171694845,0.678762802989007,0.678986713956241,0.562527234133733,0.901972046228733,0.760058466744898,0.180787511993569,0.182632642592472,0.286769503354763,0.281069367775365,-0.0237505465296059,0.131805850444372,0.0443662460619705,0.233378593348226,0.233429189653855,0.332508668172832,1.19275594055996,0.347597269423139,0.243386362194812,0.355965807081573,0.383888692857072,0.448170114686721,0.208857066985013,0.0481561984126758,-0.0238691351500971,0.164805044247863,0.0047245758452175,-0.0231675794145585,-0.0427474318739632,-0.00437199295151477,-0.129451047359911,-0.129451047359911,-0.129451047359911,0.836523994237178,0.220125612117017,0.506259211629819,0.441528099289916,0.497993568680121,0.58984669065486,0.59216988509342,0.674286203982657,0.723325175645966,0.348823604496866,1.08484767930177,0.195775497309362,-0.129451047359911,-0.0851198406358147,-0.103728245074538,-0.111865908306096,-0.0700926077735613,-0.0217601522238647,0.0474464365489858,-0.129451047359911,-0.0981256641720832,0.0670114734268707,-0.0896978609625421,0.371610273808678,0.294142481429894,0.143532678338842,0.12958830665359,0.0229627705580859,0.0337167567620914,-0.009154008355386,0.00119369015884083,-0.0293721240837829,-0.101638546365193,-0.0902093302987348,-0.0672641497217117,-0.0830397759050844,0.491105364812622,0.264564429584387,0.0221353385073872,0.211899380856437,0.60596790340055,0.566527688692871,0.475091566840697,0.580570910214199,1.27293417945055,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.129451047359911,-0.0479928526257332,-0.129451047359911,-0.129451047359911,-0.0360551176671614,-0.0690499833009192,-0.0759150405404947,-0.032234090076684,-0.00478749220243313,0.116295915631696,-0.0512183265809073,0.100133621756288,0.0586529742081761,0.0694809680925304,0.009129078391177,0.101470766842115,0.169484514409415,0.199960162115871,0.113730222178916,0.05248359172491,0.0398052196335012,-0.0730601260711828,0.0873534270885244,0.047965295783213,0.128047679435945,0.126195268207362,0.0477122007963555,0.0763472615969632,0.0460901755002197,0.161059733875323,0.112778056157266,0.0998867894595479,0.130161261955502,0.195100189128406,0.0398260426727566,0.152898854519496,0.188335712910635,0.0897773527033226,0.0564385038545883,0.0835147214039912,0.0998684734668721,0.220783186608314,0.151458979580825,0.091732315726293,-0.00695645061132441,0.141580363787747,0.023431823379135
|coexpression_dpi_cluster_scores_median=0.064513712786576,0,-0.040823310640163,0.0782188063245597,0.0765502386627899,0.0673979504369913,0.166496801550576,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0,0,0,-0.0664968100861445,-0.0664968100861445,-0.054971261262224,0.274067475082085,-0.0664968100861445,-0.0664968100861445,0.414960691097881,0.227431058621176,0.197068726315728,0,0.216538970735966,0.585500354742314,0.244546866100346,0.324005026100016,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0.519934646291614,0.221398217279998,0.385460679018311,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.00168390964217746,-0.0664968100861445,0,-0.00959713159905576,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0,0,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0,0,-0.0664968100861445,0,-0.0664968100861445,0,0,-0.0664968100861445,0,0,-0.0664968100861445,0,-0.0664968100861445,-0.0059724901553283,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0347950665036974,-0.0348574998483631,0.481306645940538,0.203115094594829,0.372901452322848,0,0.217425091336261,0,0.314517892995098,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0.266010615746611,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0.469589255555118,0.40142797506445,0.236925818646833,0.160129713416462,-0.0664968100861445,0.0601091194109999,0,-0.0664968100861445,-0.0664968100861445,-0.00552615213236456,0,-0.0664968100861445,0.107967123890141,0.0438230534834835,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0.674662332002395,-0.0664968100861445,-0.0664968100861445,0.550787138645144,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0638884081788706,0.252135884993378,0.608567117948843,1.21095919038847,0.480699550629041,-0.0133720790570333,-0.0664968100861445,-0.0664968100861445,0.0216780102995737,0.0141691718338171,0.0325714656542881,0,0.242027796578115,0.0776401664664133,0,0,0,0.0565844958663413,0,0.356135224736318,0,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0,0,0,0,0,-0.00419048806940745,-0.0664968100861445,0,-0.018534882468455,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0227291584711996,0.184379402587773,0.248726253051433,0.218823414618488,0.114050489142634,0.205488721231012,0.0932977230190468,0.245735311133992,0.289824790457,0.427228109454712,0.399329480730723,0.439692297185449,0.401534471520178,0.278483662180697,0.400186673038218,0.254442957152225,0.46496841201183,0.405802305245457,0.190581864918678,0.215183599138226,0.224856849048042,0.266479098321946,0.218000411738656,0.375850123296404,0.251636672850298,0.372635606201201,0.112756652096095,-0.0584035983715476,-0.0664968100861445,-0.0432288205647451,-0.0664968100861445,-0.0285581772070221,0,0,-0.0640155547049807,0,0,0,0,0.097805083983237,0,0.170978156452844,0.35883826609071,0.00886450065523434,0.26407012350332,0.306039749829805,0.221027463277149,0.387214179697562,0.264339671584953,0.272205091034499,0.212331610807172,0.257234389502305,0.0646592056182036,0.216962342263683,0.270311896622504,0.284270211358007,-0.0664968100861445,-0.0664968100861445,0.581115953601607,0.6204176802646,0,0.0378517928366985,0,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0519481283440075,-0.0664968100861445,0,0,0.0234060372669927,-0.0664968100861445,0,-0.0287228204259529,0.108524491213051,0.0711694759496908,0.0655375003561515,0.401535561987847,0.886039352681142,0.171890569083022,0.344253557893349,0.513651804920037,0.393839992052178,0.454022867954993,0.554402284142573,0.784579653051352,0.777496658967512,0.481067963887079,0.908175522829822,0.722856624991884,0.0607504412959853,0.201993393921286,0.268806232309405,0.316323758273961,0,0.167381030805376,-0.061130391860766,0.140040312026889,0,0.0169456317324635,1.12536969501727,0.430919595695505,0.105052169525235,0.382114873981164,0.297696806954402,0.429578858765204,0.199470399831828,0,0.00201219527759562,0.142793118298936,0.0703470711867982,-0.0664968100861445,-0.0617454855357451,0,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,0.869884459618067,0.146402131249191,0.352889811128035,0.294487196237693,0.393166222806769,0.46523599297078,0.531967100463342,0.567591156677273,0.558415673307819,0.449418168639014,0.9725772368074,0,-0.0664968100861445,0,-0.0664968100861445,-0.0664968100861445,0,0,0.0340146061659073,-0.0664968100861445,-0.0664968100861445,0.043429170484558,0,0.414551786639483,0.377610857155988,0.0530480122014902,0.0715236385554987,0.0122069399417331,0.0492938041367021,0,0.0133834129730973,0.0616083799021044,-0.0247780585940685,0,0,0.0247316947699645,0.577050192243866,0,0,0,0.651027126067543,0.688772803167916,0.385522247164721,0.620017090944081,1.17782681691237,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0664968100861445,-0.0416685429153398,-0.0664968100861445,-0.0236113985285501,0,0,0.105584372562935,-0.0664968100861445,0.00679748697267646,0.0206620731582952,0.0659329684028138,0,0.111153492846546,0.121305715142742,0.191829427113361,0.100290639196254,0.0361743250573845,0.0431415771853299,-0.0664968100861445,0.0630812651889323,0.012085478989235,0.101117998962377,0.134571240349376,0,0.0926628164484027,0.0263768245194485,0.170728148308906,0.0748964051866952,0.126604887871452,0.135404897539632,0.238133688045502,0,0.193442483447008,0.196059904035473,0.107424051177095,0.0824853913608998,0.0507326064139576,0.0101096353250913,0.109484748507427,0.10018877756663,0.0180333744431499,0,0.154075216917772,0
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:16, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr11:121405511..121405535,+p3@Tbcd
Mm9::chr14:22808697..22808715,-p4@Zfp503
Mm9::chr7:108470217..108470304,+p4@Stard10


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2647&oldid=2151933"