Personal tools

MCL coexpression mm9:2635: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=-0.0373106643855708,0.436312450823609,0.240785148552259,0.634007078313566,0.517580870670869,0.387179114569945,0.264390545168268,0.0132156190329681,-0.0253364481310896,-0.00331682359929099,-0.0803198062432881,-0.0278299476168278,0.301002142571276,0.212640103631271,0.0352129029324192,-0.0536277553989157,-0.0803198062432881,0.0154595542135069,0.0585624295258311,0.00864188400049983,0.0380154710507463,0.0338172750510786,0.0141177085701256,0.384720258348087,0.38051470045553,0.389031753899264,0.410607376342874,0.288058991498433,0.553143894676242,0.525321987389276,0.293001153016723,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,0.772453026032298,0.741735857378611,0.743406523462874,0.0880469026548277,-0.0803198062432881,0.0233894996424846,0.0668959080612666,0.070410762497787,-0.0803198062432881,-0.0631536090013908,-0.0418794229876907,-0.0803198062432881,0.00334788191575644,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0212999823666367,0.116755489116328,0.244605590673995,-0.0202282431278196,-0.0438461132441861,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.00925072648313677,-0.0803198062432881,-0.0803198062432881,-0.0265354782551196,-0.0803198062432881,-0.0803198062432881,-0.0423832263747925,-0.0803198062432881,-0.0803198062432881,-0.0619870949911548,-0.0526858095333643,-0.0803198062432881,-0.0514301718824455,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0088432513089532,-0.0415376794805108,-0.0803198062432881,-0.0676468650572674,-0.0803198062432881,-0.0160966516553015,-0.0156888022636235,-0.0417168143466254,-0.0803198062432881,-0.0440476788037837,-0.0344508329530459,-0.0803198062432881,-0.0697733694973611,0.134170668287128,0.272804155684393,0.134159703412971,0.0256599846958197,0.382095706897464,0.488168589175305,0.184846232618284,-0.0803198062432881,-0.0468875464721221,-0.0365175456793282,-0.0612444589783694,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,0.0401897993299736,0.0015242965710173,-0.0210905357459612,0.289177607806739,0.495387126442385,0.0877994738815802,0.039099024538121,0.0349916947426602,0.0719208305270213,0.000991462614215968,0.0462434966736991,0.0463445565507255,0.251544244004067,0.00530348110416692,0.230389669739671,-0.00134203227435065,0.0418242373206149,0.0178172673483239,1.10276830546936,-0.0135921003600814,-0.0803198062432881,1.23648679578285,-0.0358658858917916,-0.0122886129990068,-0.0456858212305345,-0.0265931920609963,-0.0803198062432881,-0.00974417594756093,-0.0803198062432881,0.0216689335874426,-0.0300087334962306,-0.0585543761967848,-0.0266460826285307,0.0525882335676365,0.0115201971264319,0.158593786121825,-0.046835284476774,-0.0503629580389191,-0.035793610610552,-0.0599984957678793,-0.0618510602974311,-0.0628688458399231,-0.0673535072716484,0.0692965407692626,-0.0284261721842602,-0.0552462729889758,-0.0366713761386973,-0.00716101167165127,-0.0448041696017551,0.149542149994839,0.135777409154857,0.068183079602458,-0.0803198062432881,0.0221354819277602,-0.0151742666057797,-0.0103584418683537,-0.00319911663206433,0.00873255592526567,-0.0187997593155157,-0.00627832472084817,-0.0595510322377091,0.0148761475359886,-0.0803198062432881,-0.0323578786255987,-0.0170778368888845,-0.0392172754315488,-0.0585672863143378,-0.0605663397908894,-0.0276227919862607,-0.0313398739278369,-0.0526899974114774,-0.0661404885905741,1.29621626043625,0.734624414583423,-0.000900120292439033,0.0312440653886209,0.39954860625416,0.630086405270799,0.790979626939147,0.753072065132834,1.13973397021497,0.921805197172091,0.945872599108081,0.935212086687115,0.888185191889757,1.25708061942267,1.243658147433,1.17928695455198,0.154193443858017,0.199676587704143,0.370566753179734,0.501440467671852,0.537371875826987,0.450354979025993,0.720992376237493,0.87983109733461,0.843939837993552,0.668686714686811,0.584311355389159,-0.0162970820385133,-0.0323238393821318,0.00280439281742663,-0.011505551911701,-0.0490418812227234,-0.0146436515726268,0.0586853595968135,0.211586650768924,0.211439332572946,0.115784365496208,0.185853637721448,0.248217732934384,0.535667963628074,0.500673384647017,0.559398536048525,0.0798820396334206,0.0161694905298519,-0.0176240671439822,0.0466197250961638,0.142748951609645,0.0428683472935375,0.0540655363854541,0.0380042136818056,-0.0194575687686851,0.0306824970069579,0.0660412183139842,0.0405668910477493,0.0655611741620319,0.0454268103600562,0.120938477905894,0.0869564946011436,0.076726412702045,0.26907120234217,-0.0184530871907043,-0.02065483347269,-0.0583435704380554,-0.0803198062432881,-0.0406219509292763,0.00322487515406817,-0.0520772753906289,-0.0492996831460912,-0.0512014865314024,-0.0803198062432881,0.0347676501769052,-0.043203636396656,-0.0803198062432881,-0.00847210949783207,0.154875176064305,0.0738196094742815,0.0717550048475834,0.102023205724467,1.36779901531245,0.208216389254724,0.462324201047244,1.07420950577562,1.14918570300392,1.18196655518897,0.917112246942174,1.12865791223265,1.24232860500188,1.09388870856797,1.39277550542459,1.28406808797012,0.229310486114659,-0.0357938310959422,-0.0470103980570394,-0.0240936459789271,-0.0803198062432881,-0.0327989785514292,-0.022237143276691,-0.0418423348667841,0.215219908992786,0.102762426860465,-0.0514705100406723,-0.0390606898032303,0.115812617766683,0.0662554053715051,0.0083049908850998,0.105668910455313,1.15805839712565,0.0146502689954829,0.0869672434094363,0.20872086308497,0.0455426264278026,0.0407352169866594,0.051853718453067,0.0599055812116958,-0.0206670277429423,-0.0256320126154398,-0.0113690726110631,1.34257958774729,-0.00935349246484297,0.27748376390448,0.503978287578159,0.481329423284347,0.809555313304663,0.834963947943033,0.864311233539941,1.25252386292678,1.08945151342534,0.275684698835132,-0.0803198062432881,0.0411895749888779,-0.0359885995191919,0.00297488144103453,0.000352708245233133,0.076114536014354,0.0155288546261179,0.038691219393004,-0.0151787294684533,-0.0176690398676325,-0.0070358191961532,0.478809872311374,0.106751864700515,0.376517054213749,0.455655644447385,0.418383647201647,0.419775297046842,0.354214711211969,0.444486072508865,0.508208727595042,0.464417600686122,0.454435666576282,0.423878439116372,0.479067593908662,0.522751535929739,0.104507614936308,0.29273897132162,0.283341478457396,0.237123351173784,0.257779767448239,0.181845541470008,0.166916475517935,0.207731663190403,0.0373776547135897,-0.0803198062432881,0.0141629729423209,-0.0803198062432881,-0.0573620716587318,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0262170803932323,0.0225720293986816,-0.0660246690574234,-0.0803198062432881,-0.0803198062432881,0.107537574589473,-0.0020870854642848,0.108393574965675,0.114765439720575,0.0837716654020443,0.228729199702649,0.171676994574138,0.0975564581057869,0.172224562613646,0.153988369133444,0.082819773884987,0.166935006112523,0.0729412745835867,-0.00409398228511623,0.0802534906674378,0.00670210643548234,0.125407569931221,0.0873644099661497,0.140247074876342,0.094750221619388,0.124566219424974,0.1526042000253,0.0804186395362469,0.133569099940528,0.125439355926703,0.119191323159544,-0.0158389784276188,0.199265734033317,0.129005062579577,0.171860799633391,0.224278707694292,0.166679406304582,-0.0480384075579492,0.287641161003284,0.192616126177156,0.0134730086604735,-0.0274134456247204,-0.0251655873372315
|coexpression_dpi_cluster_scores_mean=-0.0373106643855708,0.436312450823609,0.240785148552259,0.634007078313566,0.517580870670869,0.387179114569945,0.264390545168268,0.0132156190329681,-0.0253364481310896,-0.00331682359929099,-0.0803198062432881,-0.0278299476168278,0.301002142571276,0.212640103631271,0.0352129029324192,-0.0536277553989157,-0.0803198062432881,0.0154595542135069,0.0585624295258311,0.00864188400049983,0.0380154710507463,0.0338172750510786,0.0141177085701256,0.384720258348087,0.38051470045553,0.389031753899264,0.410607376342874,0.288058991498433,0.553143894676242,0.525321987389276,0.293001153016723,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,0.772453026032298,0.741735857378611,0.743406523462874,0.0880469026548277,-0.0803198062432881,0.0233894996424846,0.0668959080612666,0.070410762497787,-0.0803198062432881,-0.0631536090013908,-0.0418794229876907,-0.0803198062432881,0.00334788191575644,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0212999823666367,0.116755489116328,0.244605590673995,-0.0202282431278196,-0.0438461132441861,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.00925072648313677,-0.0803198062432881,-0.0803198062432881,-0.0265354782551196,-0.0803198062432881,-0.0803198062432881,-0.0423832263747925,-0.0803198062432881,-0.0803198062432881,-0.0619870949911548,-0.0526858095333643,-0.0803198062432881,-0.0514301718824455,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0088432513089532,-0.0415376794805108,-0.0803198062432881,-0.0676468650572674,-0.0803198062432881,-0.0160966516553015,-0.0156888022636235,-0.0417168143466254,-0.0803198062432881,-0.0440476788037837,-0.0344508329530459,-0.0803198062432881,-0.0697733694973611,0.134170668287128,0.272804155684393,0.134159703412971,0.0256599846958197,0.382095706897464,0.488168589175305,0.184846232618284,-0.0803198062432881,-0.0468875464721221,-0.0365175456793282,-0.0612444589783694,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,0.0401897993299736,0.0015242965710173,-0.0210905357459612,0.289177607806739,0.495387126442385,0.0877994738815802,0.039099024538121,0.0349916947426602,0.0719208305270213,0.000991462614215968,0.0462434966736991,0.0463445565507255,0.251544244004067,0.00530348110416692,0.230389669739671,-0.00134203227435065,0.0418242373206149,0.0178172673483239,1.10276830546936,-0.0135921003600814,-0.0803198062432881,1.23648679578285,-0.0358658858917916,-0.0122886129990068,-0.0456858212305345,-0.0265931920609963,-0.0803198062432881,-0.00974417594756093,-0.0803198062432881,0.0216689335874426,-0.0300087334962306,-0.0585543761967848,-0.0266460826285307,0.0525882335676365,0.0115201971264319,0.158593786121825,-0.046835284476774,-0.0503629580389191,-0.035793610610552,-0.0599984957678793,-0.0618510602974311,-0.0628688458399231,-0.0673535072716484,0.0692965407692626,-0.0284261721842602,-0.0552462729889758,-0.0366713761386973,-0.00716101167165127,-0.0448041696017551,0.149542149994839,0.135777409154857,0.068183079602458,-0.0803198062432881,0.0221354819277602,-0.0151742666057797,-0.0103584418683537,-0.00319911663206433,0.00873255592526567,-0.0187997593155157,-0.00627832472084817,-0.0595510322377091,0.0148761475359886,-0.0803198062432881,-0.0323578786255987,-0.0170778368888845,-0.0392172754315488,-0.0585672863143378,-0.0605663397908894,-0.0276227919862607,-0.0313398739278369,-0.0526899974114774,-0.0661404885905741,1.29621626043625,0.734624414583423,-0.000900120292439033,0.0312440653886209,0.39954860625416,0.630086405270799,0.790979626939147,0.753072065132834,1.13973397021497,0.921805197172091,0.945872599108081,0.935212086687115,0.888185191889757,1.25708061942267,1.243658147433,1.17928695455198,0.154193443858017,0.199676587704143,0.370566753179734,0.501440467671852,0.537371875826987,0.450354979025993,0.720992376237493,0.87983109733461,0.843939837993552,0.668686714686811,0.584311355389159,-0.0162970820385133,-0.0323238393821318,0.00280439281742663,-0.011505551911701,-0.0490418812227234,-0.0146436515726268,0.0586853595968135,0.211586650768924,0.211439332572946,0.115784365496208,0.185853637721448,0.248217732934384,0.535667963628074,0.500673384647017,0.559398536048525,0.0798820396334206,0.0161694905298519,-0.0176240671439822,0.0466197250961638,0.142748951609645,0.0428683472935375,0.0540655363854541,0.0380042136818056,-0.0194575687686851,0.0306824970069579,0.0660412183139842,0.0405668910477493,0.0655611741620319,0.0454268103600562,0.120938477905894,0.0869564946011436,0.076726412702045,0.26907120234217,-0.0184530871907043,-0.02065483347269,-0.0583435704380554,-0.0803198062432881,-0.0406219509292763,0.00322487515406817,-0.0520772753906289,-0.0492996831460912,-0.0512014865314024,-0.0803198062432881,0.0347676501769052,-0.043203636396656,-0.0803198062432881,-0.00847210949783207,0.154875176064305,0.0738196094742815,0.0717550048475834,0.102023205724467,1.36779901531245,0.208216389254724,0.462324201047244,1.07420950577562,1.14918570300392,1.18196655518897,0.917112246942174,1.12865791223265,1.24232860500188,1.09388870856797,1.39277550542459,1.28406808797012,0.229310486114659,-0.0357938310959422,-0.0470103980570394,-0.0240936459789271,-0.0803198062432881,-0.0327989785514292,-0.022237143276691,-0.0418423348667841,0.215219908992786,0.102762426860465,-0.0514705100406723,-0.0390606898032303,0.115812617766683,0.0662554053715051,0.0083049908850998,0.105668910455313,1.15805839712565,0.0146502689954829,0.0869672434094363,0.20872086308497,0.0455426264278026,0.0407352169866594,0.051853718453067,0.0599055812116958,-0.0206670277429423,-0.0256320126154398,-0.0113690726110631,1.34257958774729,-0.00935349246484297,0.27748376390448,0.503978287578159,0.481329423284347,0.809555313304663,0.834963947943033,0.864311233539941,1.25252386292678,1.08945151342534,0.275684698835132,-0.0803198062432881,0.0411895749888779,-0.0359885995191919,0.00297488144103453,0.000352708245233133,0.076114536014354,0.0155288546261179,0.038691219393004,-0.0151787294684533,-0.0176690398676325,-0.0070358191961532,0.478809872311374,0.106751864700515,0.376517054213749,0.455655644447385,0.418383647201647,0.419775297046842,0.354214711211969,0.444486072508865,0.508208727595042,0.464417600686122,0.454435666576282,0.423878439116372,0.479067593908662,0.522751535929739,0.104507614936308,0.29273897132162,0.283341478457396,0.237123351173784,0.257779767448239,0.181845541470008,0.166916475517935,0.207731663190403,0.0373776547135897,-0.0803198062432881,0.0141629729423209,-0.0803198062432881,-0.0573620716587318,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0803198062432881,-0.0262170803932323,0.0225720293986816,-0.0660246690574234,-0.0803198062432881,-0.0803198062432881,0.107537574589473,-0.0020870854642848,0.108393574965675,0.114765439720575,0.0837716654020443,0.228729199702649,0.171676994574138,0.0975564581057869,0.172224562613646,0.153988369133444,0.082819773884987,0.166935006112523,0.0729412745835867,-0.00409398228511623,0.0802534906674378,0.00670210643548234,0.125407569931221,0.0873644099661497,0.140247074876342,0.094750221619388,0.124566219424974,0.1526042000253,0.0804186395362469,0.133569099940528,0.125439355926703,0.119191323159544,-0.0158389784276188,0.199265734033317,0.129005062579577,0.171860799633391,0.224278707694292,0.166679406304582,-0.0480384075579492,0.287641161003284,0.192616126177156,0.0134730086604735,-0.0274134456247204,-0.0251655873372315
|coexpression_dpi_cluster_scores_median=-0.00274550413051926,0.0562249040230679,0,0.635479308711697,0.428942913720958,0.542050993915217,0.206814188078603,0.00714029230194613,0,0,-0.0672592169170953,0,0.0948786240700286,0.0783717611234276,0,-0.0672592169170953,-0.0672592169170953,0,0.0161991538552414,0,0,0.0554788932758122,0.0088284531616632,0.267195764790233,0.242251705572249,0.158427864653903,0.261355092586008,0,0.639926092730026,0.588871272653413,0.193727113581439,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0.799307849741407,0.87786594936365,0.785631166883528,-0.0218611775770275,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0.0523956512988432,-0.0672592169170953,-0.0672592169170953,-0.0583790520459769,-0.0672592169170953,0,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,0,0.196326916096511,0,-0.0642791228154629,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,-0.0672592169170953,-0.0672592169170953,-0.0123472178482634,-0.0672592169170953,-0.0672592169170953,-0.0598904622072822,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,-0.0573538215244371,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,0,-0.0578912261227808,-0.0672592169170953,-0.0648838194942559,-0.0360932819420423,-0.0672592169170953,-0.0672592169170953,0.131323367686446,0.269611904680974,0,0,0,0.160776625956154,0.0573160230295374,-0.0672592169170953,-0.0672592169170953,-0.0422934201208894,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,0,0,0.108121691327591,0.348801536408364,0,0.055198156685113,0,0.054660753342695,0,0.0244701248934004,0,0,0,0.207962401490212,-0.00188585999046451,0,0,0.753447846624577,0,-0.0672592169170953,0.924705853609703,-0.0403384407582795,0,-0.0672592169170953,-0.0125203592658935,-0.0672592169170953,0,-0.0672592169170953,0,-0.0227669835715966,-0.0672592169170953,0,0.0363599799519319,0.0978549673988937,0,-0.0672592169170953,-0.0672592169170953,-0.0401216149145607,-0.00629528549086904,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,-0.0180192996356854,-0.0672592169170953,-0.0427549114989965,0,-0.06715329188817,0.136941395522744,0.0871170892724789,0,-0.0672592169170953,0,0,0,0,0,0,0,-0.00495289490035821,0,-0.0672592169170953,-0.0192972892994057,0,-0.050392609377551,-0.0672592169170953,-0.0672592169170953,-0.0156091590416867,-0.0267604048664153,-0.0672592169170953,-0.0672592169170953,1.09915065135337,0.139703439446168,-0.0194051358779151,0,0.424428142421005,0.57748040982703,0.801748411320751,0.761253769412379,0.793777793947479,0.724879976800794,0.831275158046008,0.806536320937682,0.865442882352672,0.862830928171301,0.882236939103613,0.797758117905118,0.195623968526031,0.108239031659842,0.338737995099497,0.304976389806375,0.294413851021516,0.152537508790555,0.432550259412178,0.710378383436163,0.564545151826079,0.372427531883206,0.339612509514132,-0.000246007998959671,-0.0297123012293,-0.0124148058202086,0,-0.0672592169170953,-0.0672592169170953,0.0425541760776731,0,0.0163856515194706,0,0.0679164712700954,0.28693070537148,0.442174267268086,0.23491941546046,0,0.0666025670022941,0,-0.0511796203378821,0.0596803144223567,0.207981798382736,0.00311970492951152,-0.00458816351867339,0.0101572568036194,-0.0546851922439877,0.0196216999000607,-0.00300540581942968,-0.00135723759147548,0.128841727545421,0.0430941315218961,0,0,0,0.33246564683263,-0.002595140221963,-0.0191237469271896,-0.0672592169170953,-0.0672592169170953,-0.0546066358707335,0,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0,-0.0623516922728728,-0.0672592169170953,0,0.1558035799393,0.0121808738688985,0.0655375003561515,0.123832128606708,1.05494179047096,0.17037044383648,0.276994340976254,1.04862334213753,0.89191193045226,0.906927799452288,0.584637748980043,0.757846677854806,0.963761377196519,0.961160980555635,1.27975327193713,0.952634668428516,0,-0.0401222763707313,-0.0672592169170953,0,-0.0672592169170953,0,0,0,0.0577732432679134,0,-0.0672592169170953,-0.0499228524925957,0.120498434202187,0.0777112075957754,0,0.12402648298609,0.827856380296352,0,0,0.209289928385081,0.0670432149275605,0.0749511157581746,0.037701691308591,0.0222142714635754,0,-0.0103728607007063,-0.0672592169170953,1.09538025278315,0,0.237359972138489,0.468951987094879,0.477931521763095,0.794678943669475,0.612982947476269,0.673483779153762,0.995622122902733,0.782282188954229,0.142614696377016,-0.0672592169170953,0.0298945599156252,-0.00076240683095076,0,0,0.000538994146512997,0,0.0531569878936061,-0.0215839645972577,0.0267169326463881,0,0.411094484697063,0,0.194631773561836,0.211750386442696,0.143142089295441,0.0802978120595072,0.23497059442784,0.406780108740139,0.501689359199956,0.277927120768128,0.360304118277343,0.295997781795851,0.494317431971394,0.456987283471328,0.0516584912434809,0,0,0,0.248649546054984,0.285213205275137,0.0730404042754446,0.08769300136953,0.00284598962254753,-0.0672592169170953,0,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,-0.0113920242626016,0,-0.0672592169170953,-0.0672592169170953,-0.0672592169170953,0.0945084131504676,0,0.12350110754751,0.102528746892282,0.0825970446533688,0.337706438771778,0.129666265913041,0.00440111942431584,0.127498989610709,0.151667489705039,0.0412102481438533,0.169933821545903,0,0.0232699303249183,0.0744471192257193,0,0.112067779638927,0.128033729919821,0.141189323562236,0.0606420555836651,0.131097178513912,0.17332168606376,0.0982434449953899,0.12273161369057,0.185401889759824,0.148421355017489,-0.0672592169170953,0.195297497204522,0.106661644346145,0.174155163620816,0.205502228246806,0.119559138763091,0,0.230907198759394,0.0845301845292944,0,-0.0149811199570659,-0.00823754509459934
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:16, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr11:115324708..115324795,-p1@ENSMUST00000144230
Mm9::chr11:115773315..115773339,+p2@1110017F19Rik
Mm9::chr8:60132427..60132474,-p@chr8:60132427..60132474
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2635&oldid=2151921"