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MacroAPE 1083:CNhs12523 bl f1: Difference between revisions

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I6;0.00513025!10455-106G5;0.27279!10534-107G3;0.365359!10429-106D6;0.799259!10464-106H5;0.570755!10827-111C8;0.413138!10789-110H6;0.324218!10828-111C9;0.279423!10788-110H5;0.0663935!10792-110H9;0.637555!10765-110E9;0.0761877!10829-111D1;0.134106!10830-111D2;0.619283!10831-111D3;0.157155!10832-111D4;0.547596!10833-111D5;0.253278!10764-110E8;0.478239!10770-110F5;0.450137!10399-106A3;0.52323!10400-106A4;0.260481!10405-106A9;0.347955!10834-111D6;0.237329!10835-111D7;0.319599!10836-111D8;0.506057!10837-111D9;0.0864075!10699-109G6;0.582884!10802-111A1;0.202865!10796-110I4;0.867269!10010-101C1;0.333738!10810-111A9;0.162894!10421-106C7;0.000421377!10708-109H6;0.56207!12235-129G3;0.999108!12236-129G4;0.797079!12237-129G5;0.49536!10167-103B5;0.880313!10151-102I7;0.0238249!10428-106D5;0.0547347!10795-110I3;0.686627!10805-111A4;0.694784!10052-101G7;0.00593959!10189-103D9;0.49879!10589-108D4;0.00812685!10425-106D2;0.0289199!10427-106D4;0.00103314!10702-109G9;0.405229!10432-106D9;0.930514!10496-107C1;0.786925!10718-109I7;0.0253693!10011-101C2;0.284637!10053-101G8;0.424849!10686-109F2;0.265843!10084-102B3;0.983974!10012-101C3;0.0022439!10085-102B4;0.0179706!10482-107A5;0.0634799!10419-106C5;0.0181973!10080-102A8;0.132235!10760-110E4;0.364329!10709-109H7;0.0660411!10710-109H8;0.731878!10703-109H1;0.0637371!10719-109I8;0.000254853!10642-109A3;0.0141886!10177-103C6;6.99145e-05!10164-103B2;0.0124586!10173-103C2;0.0209891!10166-103B4;0.00173019!10083-102B2;0.00783673!10188-103D8;0.000778863!10552-107I3;0.00922536!10553-107I4;0.00568891!10013-101C4;0.0706386!10536-107G5;0.371304!10618-108G6;0.471146!10423-106C9;0.0542752!10785-110H2;0.188474!12238-129G6;0.0499032!12239-129G7;0.392389!12240-129G8;0.343467!10416-106C2;0.127301!10801-110I9;0.996919!10766-110F1;0.253914!10824-111C5;0.2565!10825-111C6;0.45791!10826-111C7;0.415721!10454-106G4;0.684386!10409-106B4;0.189765!10638-108I8;0.634108!10636-108I6;0.370841!10513-107D9;0.166845!10420-106C6;0.0151043!10082-102B1;0.0282954!10014-101C5;0.317678!10070-101I7;0.461903!10452-106G2;0.361575!10453-106G3;0.582867!10449-106F8;0.691896!10042-101F6;0.639188!10069-101I6;0.137848!10193-103E4;0.431439!10631-108I1;0.00942762!10438-106E6;0.416437!10488-107B2;0.0628013!10196-103E7;0.1397!10071-101I8;0.935745!10071-101I8;0.169568!10041-101F5;0.0575933!10451-106G1;0.2813!10450-106F9;0.0593193!10604-108F1;0.0587138!10605-108F2;0.782817!10606-108F3;0.530742!10603-108E9;0.636094!10497-107C2;0.383774!10448-106F7;0.42995!10643-109A4;0.271872!10426-106D3;0.0644955!10431-106D8;0.32429!10197-103E8;0.222366!10443-106F2;0.570525!10815-111B5;0.696466!10816-111B6;0.0106728!10817-111B7;0.00676244!10015-101C6;0.00780226!10410-106B5;0.425199!10054-101G9;0.000900251!10758-110E2;0.25769!10711-109H9;0.646271!10040-101F4;0.54513!10470-106I2;0.014931!10415-106C1;0.0927862!10198-103E9;0.786327!10614-108G2;0.228994!10612-108F9;0.866631!10549-107H9;0.0400397!10615-108G3;0.0182457!10487-107B1;0.00280863!10433-106E1;0.211767!10688-109F4;0.471846!10444-106F3;0.000172929!10444-106F3;0.856396!10485-107A8;0.941452!10413-106B8;0.985929!10175-103C4;0.614659!10161-103A8;0.0447903!12131-128D7;0.183025!10624-108H3;0.423175!10712-109I1;0.294233!10205-103F7;0.124638!10206-103F8;0.322753!10207-103F9;0.548371!10050-101G5;0.30842!10051-101G6;0.946273!10016-101C7;0.604396!10046-101G1;0.858235!10778-110G4;0.418877!10633-108I3;0.295826!10818-111B8;0.0850437!10819-111B9;0.0502565!10820-111C1;0.0379656!10484-107A7;0.0476058!10808-111A7;0.135104!10169-103B7;0.6344!10153-102I9;0.0216178!13425-144D5;0.050382!13433-144E4;0.0246754!13437-144E8;0.00309828!11904-125F5;0.0143087!11905-125F6;0.330179!10039-101F3;0.47902!10791-110H8;0.0236167!10017-101C8;0.124391!10045-101F9;0.851363!10509-107D5;0.600235!10839-111E2;0.6347!10692-109F8;0.0926766!10079-102A7;0.0570634!10078-102A6;0.251988!10721-110A1;0.763316!10569-108B2;0.00367437!10570-108B3;0.822867!10571-108B4;0.986722!10647-109A8;0.752381!10752-110D5;0.43666!10782-110G8;0.417367!10726-110A6;0.797827!10018-101C9;0.369271!10086-102B5;0.608462!10182-103D2;0.635425!10165-103B3;0.0641522!10499-107C4;0.067609!10408-106B3;0.086262!10019-101D1;0.780435!10068-101I5;0.487318!10075-102A3;0.579983!10077-102A5;0.228137!10727-110A7;0.039331!10775-110G1;0.996417!10412-106B7;0.107198!12231-129F8;0.882273!12232-129F9;0.675418!12233-129G1;0.506609!12234-129G2;0.984549!10414-106B9;0.659431!10170-103B8;0.000728329!10183-103D3;0.0188437!10150-102I6;0.0157172!10174-103C3;0.0435279!10155-103A2;0.0202291!10038-101F2;0.0841188!10838-111E1;0.225106!10759-110E3;0.000430088!10514-107E1;0.156867!10465-106H6;0.221182!10691-109F7;0.785477!10843-111E6;0.0354388!10844-111E7;2.66819e-05!11747-123G1;3.73255e-06!11748-123G2;0.163287!11749-123G3;0.27123!11750-123G4;0.186731!11751-123G5;0.382609!11840-124H4;0.615347!11752-123G6;0.296178!11753-123G7;0.822071!11754-123G8;0.350934!11755-123G9;0.145626!11756-123H1;0.187671!11833-124G6;0.0443909!11760-123H5;0.0647305!11836-124G9;0.0183478!11758-123H3;0.0616128!11835-124G8;0.252428!11762-123H7;0.179939!11838-124H2;0.166583!11757-123H2;0.169603!11759-123H4;0.0938107!11761-123H6;0.0834779!11842-124H6;0.133739!11837-124H1;0.262401!10568-108B1;0.06346!13230-141I8;0.644841!13231-141I9;0.465058!10696-109G3;0.435517!10493-107B7;0.708103!10494-107B8;0.00237796!10850-111F4;0.154439!10851-111F5;0.0238867!10852-111F6;0.288868!10853-111F7;0.559212!10854-111F8;0.190385!10855-111F9;0.686087!10856-111G1;0.257817!10847-111F1;0.446618!10846-111E9;0.949374!10848-111F2;0.0785738!10845-111E8;0.108819!10857-111G2;0.00533042!10858-111G3;0.0217973!10156-103A3;0.809143!11901-125F2;0.0521107!11902-125F3;0.653071!11903-125F4;0.737106!10689-109F5;0.502312!10648-109A9;0.315546!10784-110H1;0.218587!10744-110C6;0.944582!10772-110F7;0.362047!10474-106I6;0.920808!10600-108E6;0.263766!10684-109E9;0.146693!12226-129F3;0.628938!12227-129F4;0.0161256!10508-107D4;0.727728!10539-107G8;0.0028308!10607-108F4;0.0204802!10555-107I6;0.0191365!10774-110F9;0.0935923!10637-108I7;0.0114486!10663-109C6;0.247338!10728-110A8;0.0800713!10729-110A9;0.00124556!10430-106D7;0.850553!10730-110B1;0.781061!10813-111B3;0.375164!10812-111B2;0.586576!10037-101F1;0.792767!10172-103C1;0.0174!10163-103B1;0.0411255!10076-102A4;0.0858338!10073-102A1;0.0169708!10036-101E9;0.0443929!10195-103E6;0.00980966!10277-104E7;0.0171265!10434-106E2;0.0716249!10550-107I1;0.183189!10545-107H5;0.00970377!10544-107H4;0.346941!10704-109H2;0.155477!10510-107D6;0.261565!10558-107I9;0.741842!10020-101D2;0.200616!10732-110B3;0.955834!10049-101G4;0.814169!10698-109G5;0.0256149!10437-106E5;0.14498!10417-106C3;0.710839!10035-101E8;0.395562!10171-103B9;0.0120926!10157-103A4;0.00849936!10034-101E7;0.0382862!10072-101I9;0.0132496!10199-103F1;0.0604295!10200-103F2;0.585613!10697-109G4;0.424576!10723-110A3;0.68468!10179-103C8;0.151648!10160-103A7;0.0158637!10180-103C9;0.0402421!10162-103A9;0.0401905!10021-101D3;0.138315!10840-111E3;0.283466!10706-109H4;0.370086!10033-101E6;0.827121!10032-101E5;0.0311315!10490-107B4;0.00904237!10439-106E7;0.0143233!10022-101D4;0.409926!10176-103C5;0.626952!10469-106I1;0.0120322!10067-101I4;0.151633!10411-106B6;0.820075!10471-106I3;0.0596068!10030-101E3;0.130715!10475-106I7;0.622154!10787-110H4;0.00251316!10477-106I9;0.110286!10695-109G2;0.162425!11771-123I7;0.848433!11772-123I8;0.090609!11773-123I9;0.0674669!10093-102C3;0.0365544!10442-106F1;0.649798!10442-106F1;0.38595!10201-103F3;0.459635!10639-108I9;0.445779!11843-124H7;0.22252!11841-124H5;0.497161!10693-109F9;0.672725!10436-106E4;0.0234548!10483-107A6;0.419666!10282-104F3;0.280043!10023-101D5;0.525875!10066-101I3;0.858799!10065-101I2;0.620112!10800-110I8;0.424333!10610-108F7;0.0471474!10841-111E4;0.000320129!10541-107H1;0.00104623!10842-111E5;0.0167632!10562-108A4;0.000255793!10024-101D6;0.139341!10064-101I1;0.364365!10609-108F6;0.826154!10048-101G3;0.339933!10781-110G7;0.362978!10181-103D1;0.307523!10159-103A6;0.250783!10056-101H2;0.3591!10737-110B8;0.191596!10025-101D7;0.613102!10044-101F8;0.0629237!10424-106D1;0.0719454!10463-106H4;0.487335!10616-108G4;0.063351!10486-107A9;0.725162!10062-101H8;0.712888!10202-103F4;0.592843!10158-103A5;0.344782!10441-106E9;0.279121!10031-101E4;0.0103799!10063-101H9;0.0112384!10063-101H9;0.0460719!11763-123H8;0.364485!11765-123I1;0.623187!11768-123I4;0.994385!10807-111A6;0.714671!10790-110H7;0.172888!10798-110I6;0.0768074!10786-110H3;0.483678!10591-108D6;0.241882!10593-108D8;0.145946!10590-108D5;0.386576!10026-101D8;0.270356!10096-102C6;0.381813!10168-103B6;0.000333532!10154-103A1;0.0498991!10209-103G2;0.10748!10061-101H7;0.368081!10027-101D9;0.479025!10043-101F7;0.135983!10783-110G9;0.219385!10028-101E1;0.792482!10060-101H6;0.603714!10203-103F5;0.915487!10059-101H5;0.446429!10047-101G2;0.597262!10029-101E2;0.0435078!10058-101H4;0.221003!10418-106C4;0.523701!10492-107B6;0.288251!10694-109G1;0.109512!10797-110I5;0.723551!10057-101H3;0.677332!10100-102D1;0.112113!10055-101H1;0.213394!10204-103F6;0.843975!10191-103E2;0.722122!10563-108A5;0.024855
|name=CNhs12523_bl_f1
|name=CNhs12523_bl_f1
|tomtom_result=GCR1#MA0304.1;-1;8.68772e-05;0.0413536;0.0827071;8;TGACTTCCATT;GGCTTCCA;-!SPI1#MA0080.2;-2;0.00264561;1.25931;0.803021;7;TGACTTCCATT;ACTTCCT;-!GCR2#MA0305.1;-2;0.00280811;1.33666;0.803021;7;TGACTTCCATT;GCTTCCT;+!HSF1#MA0319.1;-2;0.00337404;1.60604;0.803021;8;TGACTTCCATT;TGTTCCAT;-!SFL1#MA0377.1;5;0.0055576;2.64542;0.927675;11;TGACTTCCATT;TTTTATTTCTTCTATTCTCTA;-!ELF5#MA0136.1;-1;0.00584669;2.78303;0.927675;9;TGACTTCCATT;TACTTCCTT;+!RORA_1#MA0071.1;0;0.00972315;4.62822;1;10;TGACTTCCATT;TGACCTTGAT;-!SPI1#MA0080.2;-3;0.0147271;7.0101;1;6;TGACTTCCATT;CTTCCG;-!che-1#MA0260.1;-1;0.015532;7.39323;1;6;TGACTTCCATT;GGTTTC;-
}}
}}

Latest revision as of 14:46, 7 September 2012

Full Name: CNhs12523_bl_f1

Motif matrix
POACGT
140.0952246765787525.92489707861955517.80496117740357362.17491706739803
211.41474565486637413.560962371900514116.272007989258734.752283983974305
3102.554680566215864.71297489642391133.356196942697335.376147594662823
440.0402764456975288.871126485441527.2682252770436849.82037179181721
52.16601804606386674.5508766529131360.792108166879797138.4909971341432
60.60937149484288410.83601862359287961.2578661198234466143.29674376174074
70.5573342697121975121.163499974239681.447897133462267722.83126862258582
80.553360693683357494.3956205984677719.31121899345109231.739799714397734
9115.262647056257114.7873514471564574.24485627648330321.705145220103066
1040.5971072201254418.1058269541410334.208802906578231583.08826291915528
1142.1718148045285714.43996779145472344.265395167086845.12282223692981

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GCR1#MA0304.1-18.68772e-050.04135360.08270718TGACTTCCATTGGCTTCCA-
SPI1#MA0080.2-20.002645611.259310.8030217TGACTTCCATTACTTCCT-
GCR2#MA0305.1-20.002808111.336660.8030217TGACTTCCATTGCTTCCT+
HSF1#MA0319.1-20.003374041.606040.8030218TGACTTCCATTTGTTCCAT-
SFL1#MA0377.150.00555762.645420.92767511TGACTTCCATTTTTTATTTCTTCTATTCTCTA-
ELF5#MA0136.1-10.005846692.783030.9276759TGACTTCCATTTACTTCCTT+
RORA_1#MA0071.100.009723154.62822110TGACTTCCATTTGACCTTGAT-
SPI1#MA0080.2-30.01472717.010116TGACTTCCATTCTTCCG-
che-1#MA0260.1-10.0155327.3932316TGACTTCCATTGGTTTC-
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