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MacroAPE 1083:Motif GCAANT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;4048;0!02;0;4048;0;0!03;4048;0;0;0!04;4048;0;0;0!05;1012;1012;1012;1012!06;0;0;0;4048 |macroape_1083_sample_pvalues=11376-118A8;0.7879...")
 
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.86617!10788-110H5;0.985179!10792-110H9;0.354!10765-110E9;0.323111!10829-111D1;0.905739!10830-111D2;0.542798!10831-111D3;0.674511!10832-111D4;0.540967!10833-111D5;0.917501!10764-110E8;0.599652!10770-110F5;0.242241!10399-106A3;0.423726!10400-106A4;0.969478!10405-106A9;0.786208!10834-111D6;0.8952!10835-111D7;0.740473!10836-111D8;0.894769!10837-111D9;0.805913!10699-109G6;0.840605!10802-111A1;0.504478!10796-110I4;0.571773!10010-101C1;0.437763!10810-111A9;0.958573!10421-106C7;0.235732!10708-109H6;0.871243!12235-129G3;0.624836!12236-129G4;0.740276!12237-129G5;0.318242!10167-103B5;0.95575!10151-102I7;0.330314!10428-106D5;0.242253!10795-110I3;0.15461!10805-111A4;0.878525!10052-101G7;0.519302!10189-103D9;0.351611!10589-108D4;0.124235!10425-106D2;0.629564!10427-106D4;0.593681!10702-109G9;0.641531!10432-106D9;0.469779!10496-107C1;0.662753!10718-109I7;0.201944!10011-101C2;0.547416!10053-101G8;0.284657!10686-109F2;0.60507!10084-102B3;0.212425!10012-101C3;0.174042!10085-102B4;0.238473!10482-107A5;0.272607!10419-106C5;0.599955!10080-102A8;0.763884!10760-110E4;0.313982!10709-109H7;0.667256!10710-109H8;0.571983!10703-109H1;0.758908!10719-109I8;0.385276!10642-109A3;0.40338!10177-103C6;0.288399!10164-103B2;0.0987318!10173-103C2;0.260026!10166-103B4;0.151663!10083-102B2;0.17912!10188-103D8;0.206184!10552-107I3;0.175788!10553-107I4;0.574393!10013-101C4;0.37787!10536-107G5;0.296216!10618-108G6;0.286614!10423-106C9;0.785895!10785-110H2;0.724!12238-129G6;0.845516!12239-129G7;0.686516!12240-129G8;0.79489!10416-106C2;0.756368!10801-110I9;0.988873!10766-110F1;0.952525!10824-111C5;0.330258!10825-111C6;0.645319!10826-111C7;0.56966!10454-106G4;0.528478!10409-106B4;0.913653!10638-108I8;0.801227!10636-108I6;0.974016!10513-107D9;0.96645!10420-106C6;0.584329!10082-102B1;0.72919!10014-101C5;0.0152544!10070-101I7;0.257356!10452-106G2;0.170471!10453-106G3;0.982414!10449-106F8;0.955176!10042-101F6;0.980859!10069-101I6;0.303355!10193-103E4;0.659213!10631-108I1;0.116139!10438-106E6;0.875704!10488-107B2;0.843894!10196-103E7;0.374769!10071-101I8;0.0825916!10071-101I8;0.334256!10041-101F5;0.21491!10451-106G1;0.588649!10450-106F9;0.821853!10604-108F1;0.573774!10605-108F2;0.734983!10606-108F3;0.529187!10603-108E9;0.748986!10497-107C2;0.852217!10448-106F7;0.713117!10643-109A4;0.437523!10426-106D3;0.579968!10431-106D8;0.381832!10197-103E8;0.365794!10443-106F2;0.414849!10815-111B5;0.233266!10816-111B6;0.407309!10817-111B7;0.821517!10015-101C6;0.43662!10410-106B5;0.552365!10054-101G9;0.569003!10758-110E2;0.370988!10711-109H9;0.847779!10040-101F4;0.99601!10470-106I2;0.256088!10415-106C1;0.887514!10198-103E9;0.539459!10614-108G2;0.279871!10612-108F9;0.383575!10549-107H9;0.741395!10615-108G3;0.669677!10487-107B1;0.770599!10433-106E1;0.214355!10688-109F4;0.379459!10444-106F3;0.378334!10444-106F3;0.105619!10485-107A8;0.0750979!10413-106B8;0.839122!10175-103C4;0.067506!10161-103A8;0.092212!12131-128D7;0.256242!10624-108H3;0.857374!10712-109I1;0.46261!10205-103F7;0.835384!10206-103F8;0.527253!10207-103F9;0.743884!10050-101G5;0.847429!10051-101G6;0.228652!10016-101C7;0.689068!10046-101G1;0.774252!10778-110G4;0.528235!10633-108I3;0.305673!10818-111B8;0.672032!10819-111B9;0.582098!10820-111C1;0.549066!10484-107A7;0.514799!10808-111A7;0.602182!10169-103B7;0.173991!10153-102I9;0.208042!13425-144D5;0.228836!13433-144E4;0.795598!13437-144E8;0.846443!11904-125F5;0.941533!11905-125F6;0.517067!10039-101F3;0.576905!10791-110H8;0.247393!10017-101C8;0.402145!10045-101F9;0.53756!10509-107D5;0.226943!10839-111E2;0.0329021!10692-109F8;0.947645!10079-102A7;0.875417!10078-102A6;0.384135!10721-110A1;0.497024!10569-108B2;0.252414!10570-108B3;0.649626!10571-108B4;0.847539!10647-109A8;0.72701!10752-110D5;0.224558!10782-110G8;0.454527!10726-110A6;0.361665!10018-101C9;0.214802!10086-102B5;0.201359!10182-103D2;0.796969!10165-103B3;0.0864972!10499-107C4;0.177592!10408-106B3;0.744299!10019-101D1;0.528913!10068-101I5;0.671124!10075-102A3;0.699941!10077-102A5;0.652474!10727-110A7;0.510604!10775-110G1;0.648235!10412-106B7;0.884241!12231-129F8;0.651876!12232-129F9;0.218526!12233-129G1;0.249537!12234-129G2;0.133999!10414-106B9;0.134954!10170-103B8;0.812775!10183-103D3;0.251343!10150-102I6;0.199434!10174-103C3;0.182523!10155-103A2;0.125343!10038-101F2;0.149203!10838-111E1;0.1888!10759-110E3;0.931566!10514-107E1;0.86885!10465-106H6;0.844969!10691-109F7;0.390974!10843-111E6;0.20945!10844-111E7;0.47092!11747-123G1;0.294765!11748-123G2;0.414721!11749-123G3;0.983144!11750-123G4;0.426899!11751-123G5;0.371932!11840-124H4;0.292917!11752-123G6;0.369173!11753-123G7;0.851842!11754-123G8;0.870231!11755-123G9;0.654015!11756-123H1;0.942071!11833-124G6;0.940881!11760-123H5;0.6615!11836-124G9;0.18733!11758-123H3;0.916837!11835-124G8;0.943877!11762-123H7;0.936363!11838-124H2;0.572907!11757-123H2;0.776581!11759-123H4;0.712389!11761-123H6;0.374132!11842-124H6;0.701411!11837-124H1;0.161744!10568-108B1;0.305996!13230-141I8;0.113829!13231-141I9;0.735703!10696-109G3;0.576485!10493-107B7;0.843214!10494-107B8;0.33707!10850-111F4;0.163853!10851-111F5;0.831524!10852-111F6;0.516534!10853-111F7;0.512369!10854-111F8;0.782554!10855-111F9;0.845251!10856-111G1;0.0789701!10847-111F1;0.274389!10846-111E9;0.921975!10848-111F2;0.395761!10845-111E8;0.317414!10857-111G2;0.858511!10858-111G3;0.536156!10156-103A3;0.272484!11901-125F2;0.207458!11902-125F3;0.69198!11903-125F4;0.43696!10689-109F5;0.519089!10648-109A9;0.10695!10784-110H1;0.830536!10744-110C6;0.960748!10772-110F7;0.666538!10474-106I6;0.531496!10600-108E6;0.440528!10684-109E9;0.960405!12226-129F3;0.925526!12227-129F4;0.727223!10508-107D4;0.126071!10539-107G8;0.293316!10607-108F4;0.159131!10555-107I6;0.27191!10774-110F9;0.316491!10637-108I7;0.941653!10663-109C6;0.164219!10728-110A8;0.0915367!10729-110A9;0.312812!10430-106D7;0.944338!10730-110B1;0.626673!10813-111B3;0.667585!10812-111B2;0.287587!10037-101F1;0.0742058!10172-103C1;0.229994!10163-103B1;0.256308!10076-102A4;0.220438!10073-102A1;0.201869!10036-101E9;0.163212!10195-103E6;0.348164!10277-104E7;0.214772!10434-106E2;0.449838!10550-107I1;0.642596!10545-107H5;0.726932!10544-107H4;0.388044!10704-109H2;0.828668!10510-107D6;0.131105!10558-107I9;0.744047!10020-101D2;0.730167!10732-110B3;0.564931!10049-101G4;0.401772!10698-109G5;0.814928!10437-106E5;0.443074!10417-106C3;0.687396!10035-101E8;0.314014!10171-103B9;0.254314!10157-103A4;0.262121!10034-101E7;0.189501!10072-101I9;0.264538!10199-103F1;0.180609!10200-103F2;0.987062!10697-109G4;0.875151!10723-110A3;0.471568!10179-103C8;0.811777!10160-103A7;0.167558!10180-103C9;0.394396!10162-103A9;0.519838!10021-101D3;0.486495!10840-111E3;0.291779!10706-109H4;0.886924!10033-101E6;0.0512226!10032-101E5;0.228154!10490-107B4;0.328331!10439-106E7;0.243227!10022-101D4;0.770063!10176-103C5;0.397741!10469-106I1;0.239972!10067-101I4;0.826901!10411-106B6;0.0204564!10471-106I3;0.614282!10030-101E3;0.250644!10475-106I7;0.174031!10787-110H4;0.914689!10477-106I9;0.712379!10695-109G2;0.279022!11771-123I7;0.885732!11772-123I8;0.825457!11773-123I9;0.550036!10093-102C3;0.926481!10442-106F1;0.96612!10442-106F1;0.659436!10201-103F3;0.633623!10639-108I9;0.212284!11843-124H7;0.672383!11841-124H5;0.575455!10693-109F9;0.437601!10436-106E4;0.732406!10483-107A6;0.690439!10282-104F3;0.430546!10023-101D5;0.480872!10066-101I3;0.551633!10065-101I2;0.883218!10800-110I8;0.640611!10610-108F7;0.983712!10841-111E4;0.832517!10541-107H1;0.889737!10842-111E5;0.176779!10562-108A4;0.991514!10024-101D6;0.822509!10064-101I1;0.379124!10609-108F6;0.260752!10048-101G3;0.964829!10781-110G7;0.447446!10181-103D1;0.608846!10159-103A6;0.056493!10056-101H2;0.18658!10737-110B8;0.131959!10025-101D7;0.596357!10044-101F8;0.309251!10424-106D1;0.593426!10463-106H4;0.758797!10616-108G4;0.906674!10486-107A9;0.882058!10062-101H8;0.251162!10202-103F4;0.0944398!10158-103A5;0.765365!10441-106E9;0.274473!10031-101E4;0.551081!10063-101H9;0.301793!10063-101H9;0.167895!11763-123H8;0.181073!11765-123I1;0.192172!11768-123I4;0.177201!10807-111A6;0.0921562!10790-110H7;0.695848!10798-110I6;0.697335!10786-110H3;0.723827!10591-108D6;0.764399!10593-108D8;0.676323!10590-108D5;0.891649!10026-101D8;0.575667!10096-102C6;0.945652!10168-103B6;0.706579!10154-103A1;0.102732!10209-103G2;0.183089!10061-101H7;0.942128!10027-101D9;0.56626!10043-101F7;0.362151!10783-110G9;0.55082!10028-101E1;0.752163!10060-101H6;0.325573!10203-103F5;0.467027!10059-101H5;0.800711!10047-101G2;0.568731!10029-101E2;0.737988!10058-101H4;0.680641!10418-106C4;0.608175!10492-107B6;0.556434!10694-109G1;0.702526!10797-110I5;0.99358!10057-101H3;0.933266!10100-102D1;0.600918!10055-101H1;0.368521!10204-103F6;0.098!10191-103E2;0.467611!10563-108A5;0.388934
|name=motif_GCAANT
|name=motif_GCAANT
|tomtom_result=nub#MA0453.1;3;0.00584594;2.78267;1;6;GCAAAT;TATGCAAATTAG;+!Dll#MA0187.1;0;0.0079036;3.76212;1;6;GCAAAT;GTAATTA;-!Pou5f1#MA0142.1;9;0.00795126;3.7848;1;6;GCAAAT;CTTTGTTATGCAAAT;+!Dr#MA0188.1;0;0.011723;5.58012;1;6;GCAAAT;CCAATTA;+!ARR1#MA0274.1;2;0.016996;8.09009;1;6;GCAAAT;ATTCAAGT;-!Nobox#MA0125.1;1;0.0184593;8.78663;1;6;GCAAAT;ACCAATTA;-!DAL82#MA0291.1;2;0.0188479;8.9716;1;6;GCAAAT;GCGCACATT;-
}}
}}

Latest revision as of 14:43, 7 September 2012

Full Name: motif_GCAANT

Motif matrix
POACGT
010040480
020404800
034048000
044048000
051012101210121012
060004048

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
nub#MA0453.130.005845942.7826716GCAAATTATGCAAATTAG+
Dll#MA0187.100.00790363.7621216GCAAATGTAATTA-
Pou5f1#MA0142.190.007951263.784816GCAAATCTTTGTTATGCAAAT+
Dr#MA0188.100.0117235.5801216GCAAATCCAATTA+
ARR1#MA0274.120.0169968.0900916GCAAATATTCAAGT-
Nobox#MA0125.110.01845938.7866316GCAAATACCAATTA-
DAL82#MA0291.120.01884798.971616GCAAATGCGCACATT-
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