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MacroAPE 1083:Motif670: Difference between revisions

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6H5;0.487085!10827-111C8;0.825935!10789-110H6;0.506486!10828-111C9;0.324096!10788-110H5;0.19943!10792-110H9;0.527677!10765-110E9;0.448955!10829-111D1;0.711586!10830-111D2;0.517976!10831-111D3;0.367674!10832-111D4;0.363157!10833-111D5;0.428515!10764-110E8;0.518314!10770-110F5;0.451637!10399-106A3;0.358938!10400-106A4;0.498254!10405-106A9;0.500318!10834-111D6;0.484605!10835-111D7;0.73645!10836-111D8;0.556341!10837-111D9;0.39793!10699-109G6;0.644663!10802-111A1;0.552993!10796-110I4;0.420497!10010-101C1;0.563158!10810-111A9;0.569938!10421-106C7;0.7976!10708-109H6;0.639313!12235-129G3;0.515839!12236-129G4;0.332251!12237-129G5;0.354769!10167-103B5;0.797859!10151-102I7;0.00231995!10428-106D5;0.0130901!10795-110I3;0.299376!10805-111A4;0.650443!10052-101G7;0.710208!10189-103D9;0.528163!10589-108D4;0.660921!10425-106D2;0.42447!10427-106D4;0.482659!10702-109G9;0.432699!10432-106D9;0.879429!10496-107C1;0.0493037!10718-109I7;0.399656!10011-101C2;0.690092!10053-101G8;0.432125!10686-109F2;0.259742!10084-102B3;0.205577!10012-101C3;0.00727104!10085-102B4;0.00664348!10482-107A5;0.0194919!10419-106C5;0.586536!10080-102A8;0.514731!10760-110E4;0.498364!10709-109H7;0.185468!10710-109H8;0.471786!10703-109H1;0.43138!10719-109I8;0.484233!10642-109A3;0.307529!10177-103C6;0.404397!10164-103B2;0.00460598!10173-103C2;0.00847958!10166-103B4;0.00489418!10083-102B2;0.0129303!10188-103D8;0.00695873!10552-107I3;0.0105262!10553-107I4;0.739694!10013-101C4;0.110908!10536-107G5;0.401171!10618-108G6;0.11406!10423-106C9;0.628334!10785-110H2;0.5154!12238-129G6;0.381517!12239-129G7;0.647933!12240-129G8;0.490195!10416-106C2;0.542101!10801-110I9;0.708809!10766-110F1;0.404883!10824-111C5;0.380411!10825-111C6;0.498509!10826-111C7;0.518032!10454-106G4;0.494325!10409-106B4;0.577538!10638-108I8;0.265532!10636-108I6;0.255879!10513-107D9;0.149005!10420-106C6;0.749662!10082-102B1;0.61601!10014-101C5;0.353967!10070-101I7;0.340256!10452-106G2;0.236588!10453-106G3;0.710804!10449-106F8;0.886916!10042-101F6;0.941632!10069-101I6;0.0430727!10193-103E4;0.379915!10631-108I1;0.00438787!10438-106E6;0.390168!10488-107B2;0.260385!10196-103E7;0.713759!10071-101I8;0.306945!10071-101I8;0.172582!10041-101F5;0.0276965!10451-106G1;0.385544!10450-106F9;0.517824!10604-108F1;0.730553!10605-108F2;0.656217!10606-108F3;0.709535!10603-108E9;0.553622!10497-107C2;0.453516!10448-106F7;0.086213!10643-109A4;0.314577!10426-106D3;0.438696!10431-106D8;0.104735!10197-103E8;0.101808!10443-106F2;0.279499!10815-111B5;0.714776!10816-111B6;0.439887!10817-111B7;0.364291!10015-101C6;0.42102!10410-106B5;0.54794!10054-101G9;0.928968!10758-110E2;0.0874177!10711-109H9;0.340959!10040-101F4;0.347589!10470-106I2;0.00590224!10415-106C1;0.440286!10198-103E9;0.00589158!10614-108G2;0.373604!10612-108F9;0.409065!10549-107H9;0.53527!10615-108G3;0.410786!10487-107B1;0.398615!10433-106E1;0.524047!10688-109F4;0.896621!10444-106F3;0.195912!10444-106F3;0.0318799!10485-107A8;0.0565004!10413-106B8;0.386546!10175-103C4;0.109565!10161-103A8;0.00838546!12131-128D7;0.0218853!10624-108H3;0.169091!10712-109I1;0.256502!10205-103F7;0.784542!10206-103F8;0.412541!10207-103F9;0.478765!10050-101G5;0.881998!10051-101G6;0.877784!10016-101C7;0.476668!10046-101G1;0.606003!10778-110G4;0.447222!10633-108I3;0.811322!10818-111B8;0.81571!10819-111B9;0.905733!10820-111C1;0.871598!10484-107A7;0.951944!10808-111A7;0.68604!10169-103B7;0.499673!10153-102I9;0.00189359!13425-144D5;0.0205654!13433-144E4;0.982516!13437-144E8;0.993704!11904-125F5;0.875202!11905-125F6;0.259419!10039-101F3;0.052954!10791-110H8;0.00647268!10017-101C8;0.22799!10045-101F9;0.304184!10509-107D5;0.224265!10839-111E2;0.252546!10692-109F8;0.804455!10079-102A7;0.129539!10078-102A6;0.395947!10721-110A1;0.606496!10569-108B2;0.667939!10570-108B3;0.0632442!10571-108B4;0.389547!10647-109A8;0.265004!10752-110D5;0.422991!10782-110G8;0.260858!10726-110A6;0.616834!10018-101C9;0.0403681!10086-102B5;0.213551!10182-103D2;0.188485!10165-103B3;0.0172991!10499-107C4;0.014648!10408-106B3;0.258188!10019-101D1;0.215735!10068-101I5;0.821005!10075-102A3;0.494068!10077-102A5;0.823207!10727-110A7;0.87941!10775-110G1;0.420532!10412-106B7;0.279612!12231-129F8;0.0549076!12232-129F9;0.81761!12233-129G1;0.604578!12234-129G2;0.809627!10414-106B9;0.963853!10170-103B8;0.310759!10183-103D3;0.00161257!10150-102I6;0.00386582!10174-103C3;0.0143007!10155-103A2;0.0227692!10038-101F2;0.0355474!10838-111E1;0.0315872!10759-110E3;0.484943!10514-107E1;0.107353!10465-106H6;0.166905!10691-109F7;0.542926!10843-111E6;0.603095!10844-111E7;0.543892!11747-123G1;0.358614!11748-123G2;0.52363!11749-123G3;0.572348!11750-123G4;0.8194!11751-123G5;0.972335!11840-124H4;0.952084!11752-123G6;0.572533!11753-123G7;0.486429!11754-123G8;0.707349!11755-123G9;0.58957!11756-123H1;0.0145935!11833-124G6;0.0552318!11760-123H5;0.12959!11836-124G9;0.250374!11758-123H3;0.917158!11835-124G8;0.763016!11762-123H7;0.800914!11838-124H2;0.847644!11757-123H2;0.884572!11759-123H4;0.652093!11761-123H6;0.389182!11842-124H6;0.666699!11837-124H1;0.83549!10568-108B1;0.786991!13230-141I8;0.281385!13231-141I9;0.554118!10696-109G3;0.611967!10493-107B7;0.540493!10494-107B8;0.383448!10850-111F4;0.188555!10851-111F5;0.678263!10852-111F6;0.0765622!10853-111F7;0.385179!10854-111F8;0.201689!10855-111F9;0.302269!10856-111G1;0.255519!10847-111F1;0.265623!10846-111E9;0.476601!10848-111F2;0.28039!10845-111E8;0.250315!10857-111G2;0.360311!10858-111G3;0.652492!10156-103A3;0.162509!11901-125F2;0.0113177!11902-125F3;0.413335!11903-125F4;0.366289!10689-109F5;0.401886!10648-109A9;0.203674!10784-110H1;0.875899!10744-110C6;0.0383388!10772-110F7;0.972227!10474-106I6;0.551526!10600-108E6;0.538216!10684-109E9;0.42268!12226-129F3;0.548193!12227-129F4;0.159674!10508-107D4;0.589257!10539-107G8;0.147036!10607-108F4;0.166167!10555-107I6;0.782071!10774-110F9;0.109284!10637-108I7;0.900324!10663-109C6;0.476247!10728-110A8;0.416362!10729-110A9;0.829586!10430-106D7;0.875734!10730-110B1;0.332902!10813-111B3;0.518731!10812-111B2;0.58464!10037-101F1;0.544222!10172-103C1;0.00825463!10163-103B1;0.00349448!10076-102A4;0.0187091!10073-102A1;0.00659499!10036-101E9;0.0337512!10195-103E6;0.0081311!10277-104E7;0.00999924!10434-106E2;0.0529671!10550-107I1;0.17227!10545-107H5;0.448834!10544-107H4;0.0237125!10704-109H2;0.179428!10510-107D6;0.330843!10558-107I9;0.152439!10020-101D2;0.9149!10732-110B3;0.215504!10049-101G4;0.605813!10698-109G5;0.0356714!10437-106E5;0.482331!10417-106C3;0.017424!10035-101E8;0.0299162!10171-103B9;0.00620501!10157-103A4;0.00316095!10034-101E7;0.00911462!10072-101I9;0.00787042!10199-103F1;0.0329249!10200-103F2;0.5388!10697-109G4;0.401577!10723-110A3;0.409602!10179-103C8;0.0610971!10160-103A7;0.0219532!10180-103C9;0.0179645!10162-103A9;0.00319171!10021-101D3;0.00793587!10840-111E3;0.921332!10706-109H4;0.531557!10033-101E6;0.0199652!10032-101E5;0.00743816!10490-107B4;0.00563026!10439-106E7;0.323484!10022-101D4;0.441232!10176-103C5;0.29502!10469-106I1;0.00439826!10067-101I4;0.427813!10411-106B6;0.156906!10471-106I3;0.403251!10030-101E3;0.78557!10475-106I7;0.0709177!10787-110H4;0.476258!10477-106I9;0.871656!10695-109G2;0.854511!11771-123I7;0.61613!11772-123I8;0.108421!11773-123I9;0.388943!10093-102C3;0.431692!10442-106F1;0.433197!10442-106F1;0.419207!10201-103F3;0.413629!10639-108I9;0.236937!11843-124H7;0.154321!11841-124H5;0.281482!10693-109F9;0.081496!10436-106E4;0.264012!10483-107A6;0.29461!10282-104F3;0.407345!10023-101D5;0.61855!10066-101I3;0.410038!10065-101I2;0.381824!10800-110I8;0.558461!10610-108F7;0.941587!10841-111E4;0.275663!10541-107H1;0.809011!10842-111E5;0.333744!10562-108A4;0.361916!10024-101D6;0.89731!10064-101I1;0.313048!10609-108F6;0.180217!10048-101G3;0.726637!10781-110G7;0.363603!10181-103D1;0.898454!10159-103A6;0.0265266!10056-101H2;0.032375!10737-110B8;0.0517825!10025-101D7;0.425277!10044-101F8;0.918775!10424-106D1;0.845889!10463-106H4;0.476121!10616-108G4;0.170117!10486-107A9;0.16789!10062-101H8;0.385556!10202-103F4;0.276457!10158-103A5;0.456087!10441-106E9;0.0370131!10031-101E4;0.873621!10063-101H9;0.0066138!10063-101H9;0.0346726!11763-123H8;0.0796393!11765-123I1;0.802514!11768-123I4;0.864936!10807-111A6;0.737278!10790-110H7;0.251001!10798-110I6;0.967115!10786-110H3;0.868495!10591-108D6;0.350873!10593-108D8;0.411181!10590-108D5;0.166524!10026-101D8;0.544967!10096-102C6;0.355687!10168-103B6;0.289318!10154-103A1;0.0101978!10209-103G2;0.0184033!10061-101H7;0.515301!10027-101D9;0.384947!10043-101F7;0.383752!10783-110G9;0.855579!10028-101E1;0.165868!10060-101H6;0.470928!10203-103F5;0.369436!10059-101H5;0.540121!10047-101G2;0.46699!10029-101E2;0.93927!10058-101H4;0.740999!10418-106C4;0.409642!10492-107B6;0.151054!10694-109G1;0.192469!10797-110I5;0.973382!10057-101H3;0.0685401!10100-102D1;0.545113!10055-101H1;0.382574!10204-103F6;0.304553!10191-103E2;0.566736!10563-108A5;0.487452
|name=motif670
|name=motif670
|tomtom_result=CHA4#MA0283.1;1;0.00371852;1.77002;1;7;GCAGAGA;GGCGGAGA;+!PDR8#MA0354.1;0;0.00599121;2.85182;1;7;GCAGAGA;GCGGAGAT;+!CUP2#MA0287.1;2;0.0175545;8.35593;1;7;GCAGAGA;CAGCAAAAATG;+!Trl#MA0205.1;-1;0.0181142;8.62234;1;6;GCAGAGA;GAGAGAGCAA;-!IME1#MA0320.1;2;0.0186015;8.8543;1;6;GCAGAGA;CCGCCGAG;+
}}
}}

Latest revision as of 14:34, 7 September 2012

Full Name: motif670

Motif matrix
POACGT
01676457201520504387
0214790118036300006095
03160648167626643933
0422291736164386570
05149930260798046580
06373022691617621160
0711937614306287146525

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CHA4#MA0283.110.003718521.7700217GCAGAGAGGCGGAGA+
PDR8#MA0354.100.005991212.8518217GCAGAGAGCGGAGAT+
CUP2#MA0287.120.01755458.3559317GCAGAGACAGCAAAAATG+
Trl#MA0205.1-10.01811428.6223416GCAGAGAGAGAGAGCAA-
IME1#MA0320.120.01860158.854316GCAGAGACCGCCGAG+
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