MacroAPE 1083:TGIF1 si: Difference between revisions
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;0.0460985!12182-129A4;0.0622758!12183-129A5;0.0728346!12184-129A6;0.0766384!10809-111A8;0.0788824!10597-108E3;0.0109534!10717-109I6;0.059973!10455-106G5;0.0039635!10534-107G3;0.0334539!10429-106D6;0.163648!10464-106H5;0.552205!10827-111C8;0.217934!10789-110H6;0.182267!10828-111C9;0.312027!10788-110H5;0.657592!10792-110H9;0.0556308!10765-110E9;0.344079!10829-111D1;0.474928!10830-111D2;0.0683753!10831-111D3;0.87797!10832-111D4;0.0646488!10833-111D5;0.129144!10764-110E8;0.0520726!10770-110F5;0.49394!10399-106A3;0.104364!10400-106A4;0.262437!10405-106A9;0.267602!10834-111D6;0.269455!10835-111D7;0.0335986!10836-111D8;0.102657!10837-111D9;0.882686!10699-109G6;0.334571!10802-111A1;0.821285!10796-110I4;0.245028!10010-101C1;0.00159944!10810-111A9;0.00225132!10421-106C7;0.0979865!10708-109H6;0.899066!12235-129G3;0.000639952!12236-129G4;0.594351!12237-129G5;0.934133!10167-103B5;0.536077!10151-102I7;0.0295625!10428-106D5;0.0079443!10795-110I3;0.278438!10805-111A4;0.207803!10052-101G7;0.0226389!10189-103D9;0.0420121!10589-108D4;0.0935777!10425-106D2;0.877677!10427-106D4;0.957343!10702-109G9;0.784342!10432-106D9;0.934715!10496-107C1;0.00401252!10718-109I7;0.00129668!10011-101C2;0.0422956!10053-101G8;0.0134424!10686-109F2;0.0957692!10084-102B3;0.750306!10012-101C3;0.0185193!10085-102B4;0.0300131!10482-107A5;0.0307059!10419-106C5;0.0121467!10080-102A8;0.616233!10760-110E4;0.173448!10709-109H7;0.00157903!10710-109H8;0.0420798!10703-109H1;0.00124789!10719-109I8;0.286199!10642-109A3;0.877013!10177-103C6;0.38123!10164-103B2;0.0139085!10173-103C2;0.00646957!10166-103B4;0.00499139!10083-102B2;0.00254046!10188-103D8;0.0136198!10552-107I3;0.0292841!10553-107I4;0.010852!10013-101C4;0.684724!10536-107G5;0.0595402!10618-108G6;0.242323!10423-106C9;0.0971765!10785-110H2;0.025275!12238-129G6;0.0321385!12239-129G7;0.530862!12240-129G8;0.227867!10416-106C2;0.365131!10801-110I9;0.356229!10766-110F1;0.0921372!10824-111C5;0.190829!10825-111C6;0.0794276!10826-111C7;0.0723244!10454-106G4;0.0787959!10409-106B4;0.192532!10638-108I8;0.420991!10636-108I6;0.000316263!10513-107D9;6.26609e-05!10420-106C6;0.00376054!10082-102B1;0.479494!10014-101C5;0.410952!10070-101I7;0.0247645!10452-106G2;0.0755663!10453-106G3;0.722395!10449-106F8;0.378167!10042-101F6;0.386704!10069-101I6;0.000270081!10193-103E4;0.0217358!10631-108I1;0.0136447!10438-106E6;0.183586!10488-107B2;0.0279084!10196-103E7;0.0296711!10071-101I8;0.0051571!10071-101I8;0.123238!10041-101F5;0.01137!10451-106G1;0.000209253!10450-106F9;0.72632!10604-108F1;0.995382!10605-108F2;0.0018113!10606-108F3;0.00088671!10603-108E9;0.00351826!10497-107C2;0.000653469!10448-106F7;0.00547938!10643-109A4;0.21108!10426-106D3;0.0581633!10431-106D8;0.00526102!10197-103E8;4.12978e-05!10443-106F2;0.0201443!10815-111B5;0.0386659!10816-111B6;0.00861032!10817-111B7;0.0564083!10015-101C6;0.0144441!10410-106B5;0.0436851!10054-101G9;0.584721!10758-110E2;0.0153771!10711-109H9;0.00551645!10040-101F4;0.00317172!10470-106I2;0.0129857!10415-106C1;0.166226!10198-103E9;4.42089e-05!10614-108G2;0.0920914!10612-108F9;0.0210205!10549-107H9;0.0133517!10615-108G3;0.17008!10487-107B1;0.432618!10433-106E1;0.0272433!10688-109F4;0.118896!10444-106F3;0.0561032!10444-106F3;0.0262889!10485-107A8;0.0253082!10413-106B8;0.00971802!10175-103C4;0.223169!10161-103A8;0.0132782!12131-128D7;0.000281994!10624-108H3;0.431397!10712-109I1;0.451571!10205-103F7;0.134315!10206-103F8;0.0120931!10207-103F9;0.00215433!10050-101G5;0.0223774!10051-101G6;0.0768574!10016-101C7;0.00454698!10046-101G1;0.00131073!10778-110G4;0.000130102!10633-108I3;0.761231!10818-111B8;0.0206381!10819-111B9;0.00221837!10820-111C1;0.00197597!10484-107A7;0.00247244!10808-111A7;0.309979!10169-103B7;0.14512!10153-102I9;0.031076!13425-144D5;0.00316927!13433-144E4;8.26209e-05!13437-144E8;1.3127e-05!11904-125F5;9.40198e-06!11905-125F6;0.624683!10039-101F3;0.207368!10791-110H8;0.0126102!10017-101C8;0.0143561!10045-101F9;0.000447067!10509-107D5;0.00115051!10839-111E2;0.106446!10692-109F8;8.73809e-05!10079-102A7;0.0243482!10078-102A6;0.00338612!10721-110A1;0.0127134!10569-108B2;0.0206108!10570-108B3;0.832915!10571-108B4;0.89851!10647-109A8;0.823568!10752-110D5;0.317455!10782-110G8;0.151923!10726-110A6;0.577768!10018-101C9;0.0399648!10086-102B5;0.564895!10182-103D2;0.863287!10165-103B3;0.00541399!10499-107C4;0.00416417!10408-106B3;0.00279689!10019-101D1;0.00141936!10068-101I5;0.00499865!10075-102A3;0.000217286!10077-102A5;0.00424739!10727-110A7;0.0434668!10775-110G1;0.772262!10412-106B7;0.241245!12231-129F8;0.0114303!12232-129F9;0.0272085!12233-129G1;0.00581059!12234-129G2;0.0404726!10414-106B9;0.0585637!10170-103B8;0.629884!10183-103D3;0.0414113!10150-102I6;0.0412204!10174-103C3;0.0107996!10155-103A2;0.00291941!10038-101F2;0.00126549!10838-111E1;0.00235171!10759-110E3;0.560768!10514-107E1;0.000186771!10465-106H6;0.359059!10691-109F7;0.00583753!10843-111E6;0.00195728!10844-111E7;0.455031!11747-123G1;0.0266013!11748-123G2;0.00328296!11749-123G3;0.00232712!11750-123G4;0.0421749!11751-123G5;0.487726!11840-124H4;0.446315!11752-123G6;0.981471!11753-123G7;0.028029!11754-123G8;0.0668!11755-123G9;0.159076!11756-123H1;0.0423643!11833-124G6;0.321558!11760-123H5;0.0504741!11836-124G9;0.0813233!11758-123H3;0.594887!11835-124G8;0.408361!11762-123H7;0.759561!11838-124H2;0.176026!11757-123H2;0.853803!11759-123H4;0.195792!11761-123H6;0.592448!11842-124H6;0.399669!11837-124H1;0.104841!10568-108B1;0.922646!13230-141I8;0.0602022!13231-141I9;0.89417!10696-109G3;0.86069!10493-107B7;0.429301!10494-107B8;0.00036599!10850-111F4;0.0147318!10851-111F5;1.32602e-05!10852-111F6;0.00312372!10853-111F7;0.0428213!10854-111F8;3.23419e-05!10855-111F9;4.84626e-07!10856-111G1;0.000127774!10847-111F1;0.00875269!10846-111E9;0.0474965!10848-111F2;4.63062e-06!10845-111E8;0.000818234!10857-111G2;0.00437602!10858-111G3;0.000207603!10156-103A3;0.000459657!11901-125F2;0.00585866!11902-125F3;0.618953!11903-125F4;0.311451!10689-109F5;0.242097!10648-109A9;0.0584!10784-110H1;8.79575e-05!10744-110C6;0.00172871!10772-110F7;0.406095!10474-106I6;0.306273!10600-108E6;0.453562!10684-109E9;0.0178189!12226-129F3;0.00439285!12227-129F4;0.0381746!10508-107D4;0.0540606!10539-107G8;0.132001!10607-108F4;0.0306286!10555-107I6;0.00559161!10774-110F9;0.133771!10637-108I7;0.000281215!10663-109C6;0.00637117!10728-110A8;4.14422e-05!10729-110A9;0.0174839!10430-106D7;0.171838!10730-110B1;0.997517!10813-111B3;0.277316!10812-111B2;0.665865!10037-101F1;0.717834!10172-103C1;0.00955868!10163-103B1;0.0252276!10076-102A4;0.00312888!10073-102A1;0.0198439!10036-101E9;0.0128103!10195-103E6;0.011993!10277-104E7;0.0128303!10434-106E2;0.000459572!10550-107I1;0.0888096!10545-107H5;0.0383143!10544-107H4;0.00119696!10704-109H2;3.35097e-06!10510-107D6;0.121465!10558-107I9;0.428753!10020-101D2;0.165463!10732-110B3;0.074061!10049-101G4;0.0227944!10698-109G5;0.660262!10437-106E5;0.053494!10417-106C3;0.00705446!10035-101E8;0.0464221!10171-103B9;0.0143355!10157-103A4;0.0334096!10034-101E7;0.00748988!10072-101I9;0.0118051!10199-103F1;0.016276!10200-103F2;0.0279498!10697-109G4;0.00919295!10723-110A3;0.10833!10179-103C8;0.0190422!10160-103A7;0.00336642!10180-103C9;0.00275872!10162-103A9;0.00875605!10021-101D3;0.00253275!10840-111E3;0.0267434!10706-109H4;0.992562!10033-101E6;0.430996!10032-101E5;0.00867588!10490-107B4;0.0153875!10439-106E7;0.00378269!10022-101D4;0.169277!10176-103C5;0.026317!10469-106I1;0.0100066!10067-101I4;0.533803!10411-106B6;0.0426254!10471-106I3;0.0643233!10030-101E3;0.0981692!10475-106I7;0.000682709!10787-110H4;0.787327!10477-106I9;0.689726!10695-109G2;0.487648!11771-123I7;0.416962!11772-123I8;0.0807818!11773-123I9;0.896928!10093-102C3;0.173679!10442-106F1;0.0415813!10442-106F1;0.0551114!10201-103F3;0.133767!10639-108I9;0.0462516!11843-124H7;0.206482!11841-124H5;0.00114971!10693-109F9;2.20833e-05!10436-106E4;0.0404194!10483-107A6;0.0724235!10282-104F3;0.0121072!10023-101D5;0.0060046!10066-101I3;0.00155941!10065-101I2;0.0483193!10800-110I8;0.0109699!10610-108F7;0.0896793!10841-111E4;0.641938!10541-107H1;0.405888!10842-111E5;0.98733!10562-108A4;0.710779!10024-101D6;0.291246!10064-101I1;0.0310046!10609-108F6;0.297599!10048-101G3;0.0238299!10781-110G7;0.00711066!10181-103D1;0.458977!10159-103A6;0.00497131!10056-101H2;0.00128051!10737-110B8;0.00433454!10025-101D7;0.356502!10044-101F8;0.0201418!10424-106D1;0.0030306!10463-106H4;0.321282!10616-108G4;0.0219857!10486-107A9;0.0222055!10062-101H8;0.130426!10202-103F4;0.0715732!10158-103A5;0.0140188!10441-106E9;9.23778e-05!10031-101E4;0.56203!10063-101H9;0.0149305!10063-101H9;0.0109441!11763-123H8;0.057512!11765-123I1;0.269362!11768-123I4;0.231785!10807-111A6;0.217684!10790-110H7;0.0285986!10798-110I6;0.0777736!10786-110H3;0.34292!10591-108D6;0.0269267!10593-108D8;0.0690558!10590-108D5;0.106407!10026-101D8;0.0498524!10096-102C6;0.181126!10168-103B6;0.736658!10154-103A1;0.00498669!10209-103G2;0.000884552!10061-101H7;0.0169836!10027-101D9;0.0173933!10043-101F7;0.0865444!10783-110G9;0.000263481!10028-101E1;0.00286806!10060-101H6;0.0624742!10203-103F5;0.0266164!10059-101H5;0.0835801!10047-101G2;0.060381!10029-101E2;0.0328238!10058-101H4;0.0818652!10418-106C4;0.0369486!10492-107B6;0.0988013!10694-109G1;4.71708e-05!10797-110I5;0.737832!10057-101H3;0.441134!10100-102D1;0.0701884!10055-101H1;0.12181!10204-103F6;0.15742!10191-103E2;0.0273675!10563-108A5;0.0274524 | ||
|name=TGIF1_si | |name=TGIF1_si | ||
|tomtom_result=achi#MA0207.1;-1;1.13627e-06;0.000540866;0.000540729;6;TTGACAG;TGACAG;+!vis#MA0252.1;-1;1.13627e-06;0.000540866;0.000540729;6;TTGACAG;TGACAG;+!hth#MA0227.1;-1;3.9358e-05;0.0187344;0.0124864;6;TTGACAG;TGACAG;+!TOS8#MA0408.1;1;6.01751e-05;0.0286434;0.014318;7;TTGACAG;TTTGACAG;-!CUP9#MA0288.1;-1;0.00413119;1.96645;0.78638;6;TTGACAG;TGACACATT;+!FZF1#MA0298.1;-1;0.00666639;3.1732;0.999747;6;TTGACAG;TGATAG;-!exd#MA0222.1;2;0.00796432;3.79102;0.999747;6;TTGACAG;TTTTGACA;+!Six4#MA0204.1;-1;0.00967839;4.60691;0.999747;6;TTGACAG;TGATAC;+!Mafb#MA0117.1;1;0.0104601;4.97899;0.999747;7;TTGACAG;GCTGACGG;+!Pax2#MA0067.1;2;0.0109273;5.20139;0.999747;6;TTGACAG;GCGTGACT;-!caup#MA0217.1;-1;0.0138884;6.61086;0.999747;5;TTGACAG;TAACA;+ | |||
}} | }} | ||
Latest revision as of 14:17, 7 September 2012
Full Name: TGIF1_si
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| achi#MA0207.1 | -1 | 1.13627e-06 | 0.000540866 | 0.000540729 | 6 | TTGACAG | TGACAG | + |
| vis#MA0252.1 | -1 | 1.13627e-06 | 0.000540866 | 0.000540729 | 6 | TTGACAG | TGACAG | + |
| hth#MA0227.1 | -1 | 3.9358e-05 | 0.0187344 | 0.0124864 | 6 | TTGACAG | TGACAG | + |
| TOS8#MA0408.1 | 1 | 6.01751e-05 | 0.0286434 | 0.014318 | 7 | TTGACAG | TTTGACAG | - |
| CUP9#MA0288.1 | -1 | 0.00413119 | 1.96645 | 0.78638 | 6 | TTGACAG | TGACACATT | + |
| FZF1#MA0298.1 | -1 | 0.00666639 | 3.1732 | 0.999747 | 6 | TTGACAG | TGATAG | - |
| exd#MA0222.1 | 2 | 0.00796432 | 3.79102 | 0.999747 | 6 | TTGACAG | TTTTGACA | + |
| Six4#MA0204.1 | -1 | 0.00967839 | 4.60691 | 0.999747 | 6 | TTGACAG | TGATAC | + |
| Mafb#MA0117.1 | 1 | 0.0104601 | 4.97899 | 0.999747 | 7 | TTGACAG | GCTGACGG | + |
| Pax2#MA0067.1 | 2 | 0.0109273 | 5.20139 | 0.999747 | 6 | TTGACAG | GCGTGACT | - |
| caup#MA0217.1 | -1 | 0.0138884 | 6.61086 | 0.999747 | 5 | TTGACAG | TAACA | + |
