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MacroAPE 1083:Motif CCAGCN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;264;0;0!02;0;264;0;0!03;264;0;0;0!04;0;0;264;0!05;0;264;0;0!06;0;0;0;264 |macroape_1083_sample_pvalues=11376-118A8;0.0543878!11327-117E4...")
 
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27!10827-111C8;0.00312081!10789-110H6;0.100482!10828-111C9;0.0342712!10788-110H5;0.349284!10792-110H9;0.0846809!10765-110E9;0.127143!10829-111D1;0.086455!10830-111D2;0.046056!10831-111D3;0.0740624!10832-111D4;0.103026!10833-111D5;0.0722233!10764-110E8;0.0989584!10770-110F5;0.00277604!10399-106A3;0.086037!10400-106A4;0.00524173!10405-106A9;0.0109124!10834-111D6;0.00583036!10835-111D7;0.0167456!10836-111D8;0.492852!10837-111D9;0.392915!10699-109G6;0.354818!10802-111A1;0.410962!10796-110I4;0.193813!10010-101C1;0.0425356!10810-111A9;0.129824!10421-106C7;0.0112278!10708-109H6;0.218792!12235-129G3;0.0133087!12236-129G4;0.0336332!12237-129G5;0.0132471!10167-103B5;0.0145632!10151-102I7;0.0130689!10428-106D5;0.0124229!10795-110I3;0.0286458!10805-111A4;0.0723428!10052-101G7;0.103045!10189-103D9;0.141591!10589-108D4;0.43293!10425-106D2;0.0408566!10427-106D4;0.799411!10702-109G9;0.196883!10432-106D9;0.470309!10496-107C1;0.0430787!10718-109I7;0.0414673!10011-101C2;0.0826546!10053-101G8;0.083539!10686-109F2;0.611594!10084-102B3;0.419019!10012-101C3;0.0430345!10085-102B4;0.00381987!10482-107A5;0.0915841!10419-106C5;0.122443!10080-102A8;0.131677!10760-110E4;0.924476!10709-109H7;0.110962!10710-109H8;0.0667873!10703-109H1;0.0183875!10719-109I8;0.106441!10642-109A3;0.0550975!10177-103C6;0.0264824!10164-103B2;0.0215899!10173-103C2;0.0141323!10166-103B4;0.297544!10083-102B2;0.258765!10188-103D8;0.166956!10552-107I3;0.0213795!10553-107I4;0.0432866!10013-101C4;0.270141!10536-107G5;0.0778721!10618-108G6;0.162756!10423-106C9;0.31977!10785-110H2;0.53913!12238-129G6;0.482147!12239-129G7;0.0135129!12240-129G8;0.0927902!10416-106C2;0.0183994!10801-110I9;0.0188899!10766-110F1;0.156381!10824-111C5;0.0382747!10825-111C6;0.239042!10826-111C7;0.22388!10454-106G4;0.30851!10409-106B4;0.0892067!10638-108I8;0.0268586!10636-108I6;0.0243374!10513-107D9;0.016486!10420-106C6;0.0911276!10082-102B1;0.0312269!10014-101C5;0.832914!10070-101I7;0.458918!10452-106G2;0.567309!10453-106G3;0.140371!10449-106F8;0.0513634!10042-101F6;0.0584372!10069-101I6;0.00227197!10193-103E4;0.00728193!10631-108I1;0.00207915!10438-106E6;0.00863792!10488-107B2;0.012486!10196-103E7;0.0165791!10071-101I8;0.570179!10071-101I8;0.268054!10041-101F5;0.117882!10451-106G1;0.0291679!10450-106F9;0.286695!10604-108F1;0.0202392!10605-108F2;0.000420704!10606-108F3;2.06978e-05!10603-108E9;0.0015272!10497-107C2;0.00727181!10448-106F7;0.11129!10643-109A4;0.0231958!10426-106D3;0.235262!10431-106D8;0.200475!10197-103E8;0.0291748!10443-106F2;0.0438914!10815-111B5;0.346695!10816-111B6;0.0374689!10817-111B7;0.0265628!10015-101C6;0.0374135!10410-106B5;0.00659352!10054-101G9;0.043678!10758-110E2;0.0195866!10711-109H9;0.0219023!10040-101F4;0.00263598!10470-106I2;0.00794622!10415-106C1;0.336427!10198-103E9;0.277322!10614-108G2;0.172043!10612-108F9;0.743609!10549-107H9;0.0743348!10615-108G3;0.00107666!10487-107B1;0.222753!10433-106E1;0.0128276!10688-109F4;0.00142382!10444-106F3;0.0290379!10444-106F3;0.942635!10485-107A8;0.844218!10413-106B8;0.153618!10175-103C4;0.106079!10161-103A8;0.0145468!12131-128D7;0.0153101!10624-108H3;0.111851!10712-109I1;0.267396!10205-103F7;0.0118055!10206-103F8;0.00920406!10207-103F9;0.00428956!10050-101G5;0.173787!10051-101G6;0.00535716!10016-101C7;0.00951693!10046-101G1;0.0297356!10778-110G4;0.00858656!10633-108I3;0.382371!10818-111B8;0.017428!10819-111B9;0.0469699!10820-111C1;0.0640385!10484-107A7;0.0597614!10808-111A7;0.155178!10169-103B7;0.28601!10153-102I9;0.0173437!13425-144D5;0.0128157!13433-144E4;0.351882!13437-144E8;0.31972!11904-125F5;0.363771!11905-125F6;0.716638!10039-101F3;0.614117!10791-110H8;0.00802517!10017-101C8;0.0368754!10045-101F9;0.9396!10509-107D5;0.557222!10839-111E2;0.0059295!10692-109F8;0.068738!10079-102A7;0.172389!10078-102A6;0.0153409!10721-110A1;0.0184858!10569-108B2;0.0544091!10570-108B3;0.128697!10571-108B4;0.156974!10647-109A8;0.105938!10752-110D5;0.0540698!10782-110G8;0.121217!10726-110A6;0.409272!10018-101C9;0.0368334!10086-102B5;0.536938!10182-103D2;0.583868!10165-103B3;0.0291122!10499-107C4;0.0116917!10408-106B3;0.0571296!10019-101D1;0.300065!10068-101I5;0.512644!10075-102A3;0.713828!10077-102A5;0.929518!10727-110A7;0.980068!10775-110G1;0.076203!10412-106B7;0.0569325!12231-129F8;0.772679!12232-129F9;0.533531!12233-129G1;0.717952!12234-129G2;0.650671!10414-106B9;0.334132!10170-103B8;0.102017!10183-103D3;0.0415185!10150-102I6;0.0188489!10174-103C3;0.0215619!10155-103A2;0.0920856!10038-101F2;0.0185191!10838-111E1;0.00584799!10759-110E3;0.0454865!10514-107E1;0.00135843!10465-106H6;0.393744!10691-109F7;0.0661213!10843-111E6;0.1117!10844-111E7;0.0774876!11747-123G1;0.103279!11748-123G2;0.569131!11749-123G3;0.355338!11750-123G4;0.424223!11751-123G5;0.437627!11840-124H4;0.183515!11752-123G6;0.285987!11753-123G7;0.457792!11754-123G8;0.413841!11755-123G9;0.522085!11756-123H1;0.610987!11833-124G6;0.715087!11760-123H5;0.675389!11836-124G9;0.238039!11758-123H3;0.428512!11835-124G8;0.283583!11762-123H7;0.0524866!11838-124H2;0.384044!11757-123H2;0.10246!11759-123H4;0.486391!11761-123H6;0.191973!11842-124H6;0.262029!11837-124H1;0.51363!10568-108B1;0.106024!13230-141I8;0.303336!13231-141I9;0.0770913!10696-109G3;0.0870908!10493-107B7;0.557713!10494-107B8;0.174912!10850-111F4;0.30386!10851-111F5;0.0623187!10852-111F6;0.330082!10853-111F7;0.22124!10854-111F8;0.0138553!10855-111F9;0.563565!10856-111G1;0.818408!10847-111F1;0.718291!10846-111E9;0.0293007!10848-111F2;0.517724!10845-111E8;0.163637!10857-111G2;0.0897113!10858-111G3;0.0506381!10156-103A3;0.173972!11901-125F2;0.00765776!11902-125F3;0.314136!11903-125F4;0.268031!10689-109F5;0.280187!10648-109A9;0.0285836!10784-110H1;0.841387!10744-110C6;0.020636!10772-110F7;0.363065!10474-106I6;0.00664833!10600-108E6;0.344248!10684-109E9;0.0461476!12226-129F3;0.261233!12227-129F4;0.272131!10508-107D4;0.205048!10539-107G8;0.106954!10607-108F4;0.25249!10555-107I6;0.529772!10774-110F9;0.358681!10637-108I7;0.131228!10663-109C6;0.300531!10728-110A8;0.612641!10729-110A9;0.189655!10430-106D7;0.409279!10730-110B1;0.0462658!10813-111B3;0.490133!10812-111B2;0.398712!10037-101F1;0.580888!10172-103C1;0.00564525!10163-103B1;0.0733312!10076-102A4;0.0199477!10073-102A1;0.0333059!10036-101E9;0.261836!10195-103E6;0.0073018!10277-104E7;0.00496155!10434-106E2;0.00530323!10550-107I1;0.0888871!10545-107H5;0.012932!10544-107H4;0.291624!10704-109H2;0.273983!10510-107D6;0.969518!10558-107I9;0.0930614!10020-101D2;0.138412!10732-110B3;0.26423!10049-101G4;0.438112!10698-109G5;0.846404!10437-106E5;0.119808!10417-106C3;0.000899999!10035-101E8;0.170272!10171-103B9;0.00613655!10157-103A4;0.0217022!10034-101E7;0.0238292!10072-101I9;0.00901792!10199-103F1;0.354126!10200-103F2;0.455905!10697-109G4;0.0134976!10723-110A3;0.218037!10179-103C8;0.175976!10160-103A7;0.234249!10180-103C9;0.204177!10162-103A9;0.547711!10021-101D3;0.657944!10840-111E3;0.0359886!10706-109H4;0.175262!10033-101E6;0.000743755!10032-101E5;0.00587668!10490-107B4;0.00636122!10439-106E7;0.0221056!10022-101D4;0.204241!10176-103C5;0.145524!10469-106I1;0.018611!10067-101I4;0.165611!10411-106B6;0.286845!10471-106I3;0.242825!10030-101E3;0.132157!10475-106I7;0.041077!10787-110H4;0.179746!10477-106I9;0.0054133!10695-109G2;0.450026!11771-123I7;0.558521!11772-123I8;0.298559!11773-123I9;0.93349!10093-102C3;0.589915!10442-106F1;0.692549!10442-106F1;0.0359252!10201-103F3;0.0406365!10639-108I9;0.413881!11843-124H7;0.23341!11841-124H5;0.0324171!10693-109F9;0.131924!10436-106E4;0.0168449!10483-107A6;0.0218385!10282-104F3;0.0168004!10023-101D5;0.0187854!10066-101I3;0.0139418!10065-101I2;0.00693669!10800-110I8;0.00434651!10610-108F7;0.1005!10841-111E4;0.209404!10541-107H1;0.0354046!10842-111E5;0.0253931!10562-108A4;0.0698408!10024-101D6;0.179237!10064-101I1;0.671955!10609-108F6;0.44805!10048-101G3;0.191966!10781-110G7;0.0766823!10181-103D1;0.134188!10159-103A6;0.0353884!10056-101H2;0.0242591!10737-110B8;0.00775891!10025-101D7;0.764448!10044-101F8;0.629791!10424-106D1;0.241493!10463-106H4;0.098071!10616-108G4;0.0852102!10486-107A9;0.206464!10062-101H8;0.0844503!10202-103F4;0.815752!10158-103A5;0.326641!10441-106E9;0.0141411!10031-101E4;0.0563688!10063-101H9;0.00698649!10063-101H9;0.221705!11763-123H8;0.147414!11765-123I1;0.17588!11768-123I4;0.219534!10807-111A6;0.257629!10790-110H7;0.206897!10798-110I6;0.215949!10786-110H3;0.642899!10591-108D6;0.0468709!10593-108D8;0.105533!10590-108D5;0.242109!10026-101D8;0.0444074!10096-102C6;0.658579!10168-103B6;0.315497!10154-103A1;0.0197082!10209-103G2;0.0103023!10061-101H7;0.00663438!10027-101D9;0.0256128!10043-101F7;0.558142!10783-110G9;0.84827!10028-101E1;0.0103082!10060-101H6;0.822344!10203-103F5;0.352892!10059-101H5;0.00607266!10047-101G2;0.00170712!10029-101E2;0.14694!10058-101H4;0.225853!10418-106C4;0.0337078!10492-107B6;0.0151555!10694-109G1;0.00147177!10797-110I5;0.971848!10057-101H3;0.0980687!10100-102D1;0.000704011!10055-101H1;0.114544!10204-103F6;0.143564!10191-103E2;0.581089!10563-108A5;0.0619994
|name=motif_CCAGCN
|name=motif_CCAGCN
|tomtom_result=ACE2#MA0267.1;1;0.00127828;0.608462;0.906983;6;CCAGCT;ACCAGCA;+!SWI5#MA0402.1;2;0.0030328;1.44361;0.906983;6;CCAGCT;AACCAGCA;-!Tcfcp2l1#MA0145.1;0;0.0043387;2.06522;0.906983;6;CCAGCT;CCAGTTCAAACCAG;+!NHLH1#MA0048.1;2;0.00502174;2.39035;0.906983;6;CCAGCT;ACGCAGCTGCGC;-!Myf#MA0055.1;2;0.00590591;2.81121;0.906983;6;CCAGCT;CAGCAGCTGCTG;-!Nr2e3#MA0164.1;0;0.00630148;2.9995;0.906983;6;CCAGCT;CAAGCTT;+!TAL1::TCF3#MA0091.1;3;0.010092;4.80381;1;6;CCAGCT;CGACCATCTGTT;+
}}
}}

Latest revision as of 13:54, 7 September 2012

Full Name: motif_CCAGCN

Motif matrix
POACGT
01026400
02026400
03264000
04002640
05026400
06000264

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ACE2#MA0267.110.001278280.6084620.9069836CCAGCTACCAGCA+
SWI5#MA0402.120.00303281.443610.9069836CCAGCTAACCAGCA-
Tcfcp2l1#MA0145.100.00433872.065220.9069836CCAGCTCCAGTTCAAACCAG+
NHLH1#MA0048.120.005021742.390350.9069836CCAGCTACGCAGCTGCGC-
Myf#MA0055.120.005905912.811210.9069836CCAGCTCAGCAGCTGCTG-
Nr2e3#MA0164.100.006301482.99950.9069836CCAGCTCAAGCTT+
TAL1::TCF3#MA0091.130.0100924.8038116CCAGCTCGACCATCTGTT+
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