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MacroAPE 1083:CNhs11781 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;59.305531467761014;22.77991320297557;584.1019492191459;242.53557545689893!2;148.64619114609818;0.504704563829444;469.7051326523092;289.86694...")
 
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24!10827-111C8;0.0508924!10789-110H6;0.10128!10828-111C9;0.407975!10788-110H5;0.554864!10792-110H9;0.276078!10765-110E9;0.355867!10829-111D1;0.036642!10830-111D2;0.0422302!10831-111D3;0.737608!10832-111D4;0.186629!10833-111D5;0.0327396!10764-110E8;0.0306679!10770-110F5;0.436925!10399-106A3;0.746529!10400-106A4;0.0545029!10405-106A9;0.0716551!10834-111D6;0.0778983!10835-111D7;0.138764!10836-111D8;0.148881!10837-111D9;0.241402!10699-109G6;0.629658!10802-111A1;0.330051!10796-110I4;0.305942!10010-101C1;0.31024!10810-111A9;0.0444991!10421-106C7;0.0155693!10708-109H6;0.126378!12235-129G3;0.0252861!12236-129G4;0.149807!12237-129G5;0.940468!10167-103B5;0.17749!10151-102I7;0.905745!10428-106D5;0.995587!10795-110I3;0.996492!10805-111A4;0.214657!10052-101G7;0.198857!10189-103D9;0.0545897!10589-108D4;0.098087!10425-106D2;0.154693!10427-106D4;0.114224!10702-109G9;0.115597!10432-106D9;0.0272437!10496-107C1;0.308858!10718-109I7;0.547756!10011-101C2;0.128924!10053-101G8;0.0191163!10686-109F2;0.495546!10084-102B3;0.534414!10012-101C3;0.707276!10085-102B4;0.908663!10482-107A5;0.836215!10419-106C5;0.336997!10080-102A8;0.164526!10760-110E4;0.0275605!10709-109H7;0.54388!10710-109H8;0.504995!10703-109H1;0.935069!10719-109I8;0.0818651!10642-109A3;0.452635!10177-103C6;0.0875464!10164-103B2;0.81931!10173-103C2;0.942665!10166-103B4;0.427306!10083-102B2;0.794703!10188-103D8;0.76634!10552-107I3;0.665504!10553-107I4;0.127829!10013-101C4;0.849488!10536-107G5;0.0115085!10618-108G6;0.000484845!10423-106C9;0.0975891!10785-110H2;0.135081!12238-129G6;0.164727!12239-129G7;0.0975696!12240-129G8;0.0451187!10416-106C2;0.0581096!10801-110I9;0.208801!10766-110F1;0.385064!10824-111C5;0.386398!10825-111C6;0.147028!10826-111C7;0.136699!10454-106G4;0.137246!10409-106B4;0.103355!10638-108I8;0.205645!10636-108I6;0.179612!10513-107D9;0.0398331!10420-106C6;0.161188!10082-102B1;0.0632078!10014-101C5;0.141503!10070-101I7;0.0362442!10452-106G2;0.019244!10453-106G3;0.0822982!10449-106F8;0.074244!10042-101F6;0.0646408!10069-101I6;0.840643!10193-103E4;0.0784218!10631-108I1;0.875133!10438-106E6;0.0219086!10488-107B2;0.657653!10196-103E7;0.148533!10071-101I8;0.0112114!10071-101I8;0.0912262!10041-101F5;0.772475!10451-106G1;0.145675!10450-106F9;0.0849318!10604-108F1;0.116955!10605-108F2;0.324541!10606-108F3;0.0361984!10603-108E9;0.0765233!10497-107C2;0.0736608!10448-106F7;0.698907!10643-109A4;0.0507819!10426-106D3;0.21307!10431-106D8;0.69416!10197-103E8;0.707165!10443-106F2;0.00335397!10815-111B5;0.685227!10816-111B6;0.0686586!10817-111B7;0.0870174!10015-101C6;0.0670626!10410-106B5;0.00897748!10054-101G9;0.0264981!10758-110E2;0.0782851!10711-109H9;0.088488!10040-101F4;0.0361905!10470-106I2;0.990925!10415-106C1;0.391201!10198-103E9;0.677244!10614-108G2;0.0455439!10612-108F9;0.213431!10549-107H9;0.251785!10615-108G3;0.0123772!10487-107B1;0.075147!10433-106E1;0.021768!10688-109F4;0.68796!10444-106F3;0.0769875!10444-106F3;0.641265!10485-107A8;0.481152!10413-106B8;0.141958!10175-103C4;0.869453!10161-103A8;0.808417!12131-128D7;0.83477!10624-108H3;0.535802!10712-109I1;0.313272!10205-103F7;0.172469!10206-103F8;0.0075714!10207-103F9;0.0015951!10050-101G5;0.015233!10051-101G6;0.00489799!10016-101C7;0.0227401!10046-101G1;0.00791211!10778-110G4;0.0173119!10633-108I3;0.184035!10818-111B8;0.27012!10819-111B9;0.257397!10820-111C1;0.27056!10484-107A7;0.273571!10808-111A7;0.307734!10169-103B7;0.0998948!10153-102I9;0.675472!13425-144D5;0.936746!13433-144E4;0.227147!13437-144E8;0.258132!11904-125F5;0.160794!11905-125F6;0.310953!10039-101F3;0.991538!10791-110H8;0.917517!10017-101C8;0.503946!10045-101F9;3.05526e-05!10509-107D5;0.00321784!10839-111E2;0.0348744!10692-109F8;0.185869!10079-102A7;0.619143!10078-102A6;0.0146261!10721-110A1;0.0192526!10569-108B2;0.0217132!10570-108B3;0.0957688!10571-108B4;0.0712457!10647-109A8;0.0361885!10752-110D5;0.272201!10782-110G8;0.140597!10726-110A6;0.310458!10018-101C9;0.957253!10086-102B5;0.200866!10182-103D2;0.406193!10165-103B3;0.906068!10499-107C4;0.946731!10408-106B3;0.00788092!10019-101D1;0.709655!10068-101I5;0.0496577!10075-102A3;0.0144416!10077-102A5;0.143248!10727-110A7;0.29687!10775-110G1;0.0268831!10412-106B7;0.0863239!12231-129F8;0.538455!12232-129F9;0.104562!12233-129G1;0.0831575!12234-129G2;0.086326!10414-106B9;0.243821!10170-103B8;0.0788206!10183-103D3;0.693579!10150-102I6;0.840623!10174-103C3;0.980363!10155-103A2;0.648924!10038-101F2;0.668352!10838-111E1;0.61015!10759-110E3;0.0840172!10514-107E1;0.056407!10465-106H6;0.810144!10691-109F7;0.965784!10843-111E6;0.95657!10844-111E7;0.255643!11747-123G1;0.100991!11748-123G2;0.215081!11749-123G3;0.110538!11750-123G4;0.107531!11751-123G5;0.32245!11840-124H4;0.214914!11752-123G6;0.136388!11753-123G7;0.296322!11754-123G8;0.201447!11755-123G9;0.285347!11756-123H1;0.786858!11833-124G6;0.166392!11760-123H5;0.632807!11836-124G9;0.100842!11758-123H3;0.298603!11835-124G8;0.188812!11762-123H7;0.0373578!11838-124H2;0.148881!11757-123H2;0.268253!11759-123H4;0.542612!11761-123H6;0.457508!11842-124H6;0.08973!11837-124H1;0.13902!10568-108B1;0.0558032!13230-141I8;0.929829!13231-141I9;0.140509!10696-109G3;0.100552!10493-107B7;0.0425385!10494-107B8;0.17961!10850-111F4;0.410108!10851-111F5;0.0552594!10852-111F6;0.680804!10853-111F7;0.199841!10854-111F8;0.0233776!10855-111F9;0.637822!10856-111G1;0.500334!10847-111F1;0.66595!10846-111E9;0.709976!10848-111F2;0.355462!10845-111E8;0.376662!10857-111G2;0.907483!10858-111G3;0.0149403!10156-103A3;0.305826!11901-125F2;0.938268!11902-125F3;0.0558378!11903-125F4;0.067706!10689-109F5;0.27906!10648-109A9;0.254752!10784-110H1;0.227181!10744-110C6;0.544548!10772-110F7;0.0773187!10474-106I6;0.0685766!10600-108E6;0.0581681!10684-109E9;0.468902!12226-129F3;0.395705!12227-129F4;0.682984!10508-107D4;0.603469!10539-107G8;0.00860685!10607-108F4;0.0293348!10555-107I6;0.283294!10774-110F9;0.0274206!10637-108I7;0.156136!10663-109C6;0.129714!10728-110A8;0.194432!10729-110A9;0.300947!10430-106D7;0.188799!10730-110B1;0.00227918!10813-111B3;0.0932225!10812-111B2;0.42938!10037-101F1;0.0306411!10172-103C1;0.904344!10163-103B1;0.998002!10076-102A4;0.946185!10073-102A1;0.817859!10036-101E9;0.635204!10195-103E6;0.852195!10277-104E7;0.847516!10434-106E2;0.694904!10550-107I1;0.414085!10545-107H5;0.36667!10544-107H4;0.829993!10704-109H2;0.755295!10510-107D6;0.456088!10558-107I9;0.499702!10020-101D2;0.688973!10732-110B3;0.0294021!10049-101G4;0.90593!10698-109G5;0.223483!10437-106E5;0.0729327!10417-106C3;0.471519!10035-101E8;0.995902!10171-103B9;0.91863!10157-103A4;0.774205!10034-101E7;0.920247!10072-101I9;0.934575!10199-103F1;0.516252!10200-103F2;0.000275323!10697-109G4;0.00714109!10723-110A3;0.576216!10179-103C8;0.78242!10160-103A7;0.915339!10180-103C9;0.694111!10162-103A9;0.425247!10021-101D3;0.942049!10840-111E3;0.019221!10706-109H4;0.133199!10033-101E6;0.991043!10032-101E5;0.894379!10490-107B4;0.943437!10439-106E7;0.0131323!10022-101D4;0.0451077!10176-103C5;0.0241819!10469-106I1;0.820015!10067-101I4;0.256597!10411-106B6;0.172944!10471-106I3;0.615573!10030-101E3;0.860151!10475-106I7;0.146208!10787-110H4;0.0268197!10477-106I9;0.022139!10695-109G2;0.548627!11771-123I7;0.0301257!11772-123I8;0.791911!11773-123I9;0.577091!10093-102C3;0.207328!10442-106F1;0.000887874!10442-106F1;0.360478!10201-103F3;0.4205!10639-108I9;0.0100752!11843-124H7;0.351858!11841-124H5;0.356816!10693-109F9;0.117482!10436-106E4;0.359935!10483-107A6;0.215318!10282-104F3;0.364818!10023-101D5;0.12991!10066-101I3;0.0627323!10065-101I2;0.183435!10800-110I8;0.00142548!10610-108F7;0.267465!10841-111E4;0.109876!10541-107H1;0.00664359!10842-111E5;0.296504!10562-108A4;0.0685753!10024-101D6;0.308314!10064-101I1;0.0619246!10609-108F6;0.0674746!10048-101G3;0.434822!10781-110G7;0.0219946!10181-103D1;0.387774!10159-103A6;0.868226!10056-101H2;0.821277!10737-110B8;0.461702!10025-101D7;0.131289!10044-101F8;0.215584!10424-106D1;0.146738!10463-106H4;0.0620644!10616-108G4;0.811846!10486-107A9;0.279604!10062-101H8;0.117152!10202-103F4;0.0249749!10158-103A5;0.00301866!10441-106E9;0.972145!10031-101E4;0.0186716!10063-101H9;0.877083!10063-101H9;0.702958!11763-123H8;0.0556092!11765-123I1;0.131351!11768-123I4;0.13436!10807-111A6;0.320169!10790-110H7;0.134756!10798-110I6;0.0387086!10786-110H3;0.0545554!10591-108D6;0.334815!10593-108D8;0.0835341!10590-108D5;0.3792!10026-101D8;0.0961948!10096-102C6;0.855784!10168-103B6;0.108516!10154-103A1;0.665555!10209-103G2;0.911044!10061-101H7;0.00298871!10027-101D9;0.0372171!10043-101F7;0.882237!10783-110G9;0.593878!10028-101E1;0.78489!10060-101H6;0.0143076!10203-103F5;0.0202289!10059-101H5;0.0103053!10047-101G2;0.0455053!10029-101E2;0.0540743!10058-101H4;0.024158!10418-106C4;0.00487573!10492-107B6;0.361681!10694-109G1;0.283795!10797-110I5;0.189883!10057-101H3;0.251855!10100-102D1;0.00283032!10055-101H1;0.0141992!10204-103F6;0.0285538!10191-103E2;0.0162099!10563-108A5;0.0457793
|name=CNhs11781_bl_f0
|name=CNhs11781_bl_f0
|tomtom_result=SP1#MA0079.2;1;0.00398891;1.89872;1;9;GGGCAGGAGATG;GGGGGCGGGG;-!CTCF#MA0139.1;1;0.00648907;3.0888;1;12;GGGCAGGAGATG;TGGCCACCAGGGGGCGCTA;+!Pax4#MA0068.1;0;0.00655675;3.12101;1;12;GGGCAGGAGATG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!YGR067C#MA0425.1;1;0.0104063;4.95339;1;12;GGGCAGGAGATG;TGAAAAAGTGGGGT;-!Tal1::Gata1#MA0140.1;1;0.0132411;6.30274;1;12;GGGCAGGAGATG;CTGGTGGGGACAGATAAG;+!ELF5#MA0136.1;-3;0.0136962;6.51938;1;9;GGGCAGGAGATG;AAGGAAGTA;-!CHA4#MA0283.1;-2;0.0137777;6.55817;1;8;GGGCAGGAGATG;GGCGGAGA;+!STAT1#MA0137.2;3;0.0158919;7.56455;1;12;GGGCAGGAGATG;GGTTTCCGGGAAATG;-!ELK1#MA0028.1;0;0.0180164;8.57583;1;10;GGGCAGGAGATG;GAGCCGGAAG;+!FEV#MA0156.1;-3;0.0190317;9.0591;1;8;GGGCAGGAGATG;CAGGAAAT;+!RXR::RAR_DR5#MA0159.1;2;0.0200507;9.54413;1;12;GGGCAGGAGATG;AGGTCATGGAGAGGTCA;+
}}
}}

Latest revision as of 13:49, 7 September 2012

Full Name: CNhs11781_bl_f0

Motif matrix
POACGT
159.30553146776101422.77991320297557584.1019492191459242.53557545689893
2148.646191146098180.504704563829444469.7051326523092289.86694098454444
394.64113943184464160.83707358195466650.7402687054122.504487627570418
4264.8290068341038398.22412669188566243.092303081024282.5775327397678214
5632.94505530270650.02.2457401081141484273.5321739359608
634.5621384343336760.0874.16083091244760.0
70.70576635789537725.307601423607923902.18177126878280.527830296495059
8842.45906912255620.051.7087064473615514.555193776863497
9142.62385526379233.3736075247343997750.204164634294612.521341923960172
10386.35302343983886121.60926203846434281.55161870433847119.20906516413994
11296.061651602573932.685473062578914293.65011241645533316.3257322651733
129.633023786176365205.1972464237848693.20988056737680.682818569444334

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.210.003988911.8987219GGGCAGGAGATGGGGGGCGGGG-
CTCF#MA0139.110.006489073.0888112GGGCAGGAGATGTGGCCACCAGGGGGCGCTA+
Pax4#MA0068.100.006556753.12101112GGGCAGGAGATGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
YGR067C#MA0425.110.01040634.95339112GGGCAGGAGATGTGAAAAAGTGGGGT-
Tal1::Gata1#MA0140.110.01324116.30274112GGGCAGGAGATGCTGGTGGGGACAGATAAG+
ELF5#MA0136.1-30.01369626.5193819GGGCAGGAGATGAAGGAAGTA-
CHA4#MA0283.1-20.01377776.5581718GGGCAGGAGATGGGCGGAGA+
STAT1#MA0137.230.01589197.56455112GGGCAGGAGATGGGTTTCCGGGAAATG-
ELK1#MA0028.100.01801648.57583110GGGCAGGAGATGGAGCCGGAAG+
FEV#MA0156.1-30.01903179.059118GGGCAGGAGATGCAGGAAAT+
RXR::RAR_DR5#MA0159.120.02005079.54413112GGGCAGGAGATGAGGTCATGGAGAGGTCA+
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