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MacroAPE 1083:Motif GNTACT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;192;0!02;48;48;48;48!03;0;0;0;192!04;192;0;0;0!05;0;192;0;0!06;0;0;0;192 |macroape_1083_sample_pvalues=11376-118A8;0.684586!11327-117E...")
 
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8819!10828-111C9;0.558849!10788-110H5;0.471901!10792-110H9;0.780965!10765-110E9;0.425061!10829-111D1;0.763202!10830-111D2;0.933717!10831-111D3;0.697507!10832-111D4;0.642289!10833-111D5;0.812754!10764-110E8;0.813861!10770-110F5;0.524865!10399-106A3;0.578404!10400-106A4;0.578557!10405-106A9;0.526784!10834-111D6;0.509914!10835-111D7;0.998608!10836-111D8;0.520145!10837-111D9;0.306496!10699-109G6;0.318153!10802-111A1;0.394996!10796-110I4;0.186269!10010-101C1;0.366443!10810-111A9;0.593157!10421-106C7;0.779866!10708-109H6;0.717685!12235-129G3;0.193907!12236-129G4;0.524263!12237-129G5;0.83692!10167-103B5;0.841893!10151-102I7;0.43999!10428-106D5;0.337286!10795-110I3;0.644723!10805-111A4;0.622829!10052-101G7;0.715274!10189-103D9;0.837661!10589-108D4;0.576621!10425-106D2;0.29097!10427-106D4;0.455568!10702-109G9;0.276299!10432-106D9;0.513269!10496-107C1;0.894785!10718-109I7;0.844031!10011-101C2;0.564715!10053-101G8;0.892591!10686-109F2;0.307451!10084-102B3;0.802503!10012-101C3;0.445459!10085-102B4;0.436413!10482-107A5;0.213978!10419-106C5;0.436225!10080-102A8;0.525367!10760-110E4;0.960201!10709-109H7;0.8279!10710-109H8;0.519041!10703-109H1;0.795806!10719-109I8;0.267043!10642-109A3;0.742609!10177-103C6;0.39515!10164-103B2;0.466217!10173-103C2;0.375582!10166-103B4;0.29527!10083-102B2;0.45128!10188-103D8;0.404623!10552-107I3;0.470961!10553-107I4;0.519519!10013-101C4;0.601405!10536-107G5;0.909864!10618-108G6;0.974665!10423-106C9;0.143126!10785-110H2;0.281653!12238-129G6;0.423724!12239-129G7;0.438875!12240-129G8;0.353205!10416-106C2;0.413559!10801-110I9;0.814055!10766-110F1;0.385032!10824-111C5;0.389559!10825-111C6;0.92103!10826-111C7;0.933155!10454-106G4;0.800563!10409-106B4;0.992294!10638-108I8;0.270964!10636-108I6;0.362067!10513-107D9;0.829623!10420-106C6;0.561845!10082-102B1;0.61296!10014-101C5;0.869968!10070-101I7;0.747374!10452-106G2;0.652526!10453-106G3;0.85383!10449-106F8;0.539277!10042-101F6;0.674636!10069-101I6;0.161358!10193-103E4;0.769861!10631-108I1;0.457314!10438-106E6;0.666192!10488-107B2;0.697162!10196-103E7;0.473535!10071-101I8;0.819343!10071-101I8;0.963332!10041-101F5;0.324872!10451-106G1;0.233188!10450-106F9;0.217286!10604-108F1;0.405332!10605-108F2;0.96202!10606-108F3;0.894374!10603-108E9;0.771601!10497-107C2;0.67976!10448-106F7;0.810665!10643-109A4;0.378614!10426-106D3;0.545076!10431-106D8;0.81383!10197-103E8;0.415775!10443-106F2;0.946776!10815-111B5;0.0855474!10816-111B6;0.469539!10817-111B7;0.378767!10015-101C6;0.426917!10410-106B5;0.960677!10054-101G9;0.340988!10758-110E2;0.929468!10711-109H9;0.466668!10040-101F4;0.278794!10470-106I2;0.375467!10415-106C1;0.786034!10198-103E9;0.315476!10614-108G2;0.670124!10612-108F9;0.778266!10549-107H9;0.806364!10615-108G3;0.299068!10487-107B1;0.306817!10433-106E1;0.820765!10688-109F4;0.164401!10444-106F3;0.456161!10444-106F3;0.0679886!10485-107A8;0.073674!10413-106B8;0.524433!10175-103C4;0.620188!10161-103A8;0.341795!12131-128D7;0.251833!10624-108H3;0.336293!10712-109I1;0.863279!10205-103F7;0.246342!10206-103F8;0.689192!10207-103F9;0.992715!10050-101G5;0.402507!10051-101G6;0.3194!10016-101C7;0.773739!10046-101G1;0.834223!10778-110G4;0.998955!10633-108I3;0.694425!10818-111B8;0.400784!10819-111B9;0.480278!10820-111C1;0.481594!10484-107A7;0.525218!10808-111A7;0.483949!10169-103B7;0.336877!10153-102I9;0.29495!13425-144D5;0.259364!13433-144E4;0.910246!13437-144E8;0.808627!11904-125F5;0.825475!11905-125F6;0.875497!10039-101F3;0.830927!10791-110H8;0.360627!10017-101C8;0.377795!10045-101F9;0.40774!10509-107D5;0.876746!10839-111E2;0.853382!10692-109F8;0.31463!10079-102A7;0.147805!10078-102A6;0.861788!10721-110A1;0.727284!10569-108B2;0.947157!10570-108B3;0.0510044!10571-108B4;0.160762!10647-109A8;0.188829!10752-110D5;0.670588!10782-110G8;0.132298!10726-110A6;0.139458!10018-101C9;0.895364!10086-102B5;0.596807!10182-103D2;0.452592!10165-103B3;0.524054!10499-107C4;0.445823!10408-106B3;0.827005!10019-101D1;0.935314!10068-101I5;0.858585!10075-102A3;0.449543!10077-102A5;0.647631!10727-110A7;0.0776848!10775-110G1;0.1529!10412-106B7;0.570846!12231-129F8;0.890051!12232-129F9;0.396436!12233-129G1;0.697075!12234-129G2;0.426663!10414-106B9;0.481306!10170-103B8;0.0989462!10183-103D3;0.434033!10150-102I6;0.42477!10174-103C3;0.329448!10155-103A2;0.295476!10038-101F2;0.300997!10838-111E1;0.507685!10759-110E3;0.529202!10514-107E1;0.734707!10465-106H6;0.500943!10691-109F7;0.900959!10843-111E6;0.645405!10844-111E7;0.219813!11747-123G1;0.0680773!11748-123G2;0.721875!11749-123G3;0.643336!11750-123G4;0.934395!11751-123G5;0.518695!11840-124H4;0.810577!11752-123G6;0.703556!11753-123G7;0.443491!11754-123G8;0.936522!11755-123G9;0.844549!11756-123H1;0.772612!11833-124G6;0.792579!11760-123H5;0.364236!11836-124G9;0.394325!11758-123H3;0.818146!11835-124G8;0.440363!11762-123H7;0.447036!11838-124H2;0.27683!11757-123H2;0.101669!11759-123H4;0.972262!11761-123H6;0.473441!11842-124H6;0.374621!11837-124H1;0.786214!10568-108B1;0.549459!13230-141I8;0.654905!13231-141I9;0.737233!10696-109G3;0.939988!10493-107B7;0.9141!10494-107B8;0.3318!10850-111F4;0.757649!10851-111F5;0.178423!10852-111F6;0.668301!10853-111F7;0.199304!10854-111F8;0.304769!10855-111F9;0.286344!10856-111G1;0.651069!10847-111F1;0.805412!10846-111E9;0.28888!10848-111F2;0.11588!10845-111E8;0.702013!10857-111G2;0.787107!10858-111G3;0.147952!10156-103A3;0.291709!11901-125F2;0.338108!11902-125F3;0.160933!11903-125F4;0.251872!10689-109F5;0.0195904!10648-109A9;0.320617!10784-110H1;0.106832!10744-110C6;0.46714!10772-110F7;0.376514!10474-106I6;0.764231!10600-108E6;0.383056!10684-109E9;0.336445!12226-129F3;0.753446!12227-129F4;0.41349!10508-107D4;0.752655!10539-107G8;0.294204!10607-108F4;0.360764!10555-107I6;0.949566!10774-110F9;0.729721!10637-108I7;0.951982!10663-109C6;0.618749!10728-110A8;0.421561!10729-110A9;0.790062!10430-106D7;0.694092!10730-110B1;0.914077!10813-111B3;0.0984678!10812-111B2;0.951652!10037-101F1;0.978885!10172-103C1;0.399289!10163-103B1;0.430951!10076-102A4;0.379272!10073-102A1;0.406733!10036-101E9;0.216639!10195-103E6;0.337086!10277-104E7;0.270727!10434-106E2;0.216959!10550-107I1;0.912747!10545-107H5;0.851151!10544-107H4;0.688379!10704-109H2;0.440034!10510-107D6;0.00385857!10558-107I9;0.629324!10020-101D2;0.53438!10732-110B3;0.408275!10049-101G4;0.0415442!10698-109G5;0.884326!10437-106E5;0.151092!10417-106C3;0.847944!10035-101E8;0.304552!10171-103B9;0.413332!10157-103A4;0.350907!10034-101E7;0.336499!10072-101I9;0.404718!10199-103F1;0.31795!10200-103F2;0.845654!10697-109G4;0.873393!10723-110A3;0.650261!10179-103C8;0.963906!10160-103A7;0.578145!10180-103C9;0.670943!10162-103A9;0.272279!10021-101D3;0.504899!10840-111E3;0.401626!10706-109H4;0.181435!10033-101E6;0.479837!10032-101E5;0.734363!10490-107B4;0.392698!10439-106E7;0.711882!10022-101D4;0.583855!10176-103C5;0.892292!10469-106I1;0.382352!10067-101I4;0.115865!10411-106B6;0.924066!10471-106I3;0.594465!10030-101E3;0.391051!10475-106I7;0.822984!10787-110H4;0.596855!10477-106I9;0.383909!10695-109G2;0.873142!11771-123I7;0.821305!11772-123I8;0.948493!11773-123I9;0.682644!10093-102C3;0.378113!10442-106F1;0.944635!10442-106F1;0.118578!10201-103F3;0.199385!10639-108I9;0.977404!11843-124H7;0.901542!11841-124H5;0.902621!10693-109F9;0.960976!10436-106E4;0.56451!10483-107A6;0.460362!10282-104F3;0.877117!10023-101D5;0.540698!10066-101I3;0.645778!10065-101I2;0.476737!10800-110I8;0.97387!10610-108F7;0.243148!10841-111E4;0.0121052!10541-107H1;0.505944!10842-111E5;0.0964382!10562-108A4;0.236487!10024-101D6;0.00876452!10064-101I1;0.886144!10609-108F6;0.455584!10048-101G3;0.0197053!10781-110G7;0.959505!10181-103D1;0.00594389!10159-103A6;0.358447!10056-101H2;0.275428!10737-110B8;0.57457!10025-101D7;0.929242!10044-101F8;0.385963!10424-106D1;0.72233!10463-106H4;0.357401!10616-108G4;0.754453!10486-107A9;0.268762!10062-101H8;0.482714!10202-103F4;0.786651!10158-103A5;0.955831!10441-106E9;0.23655!10031-101E4;0.74655!10063-101H9;0.356592!10063-101H9;0.265181!11763-123H8;0.916803!11765-123I1;0.732513!11768-123I4;0.748398!10807-111A6;0.660116!10790-110H7;0.984204!10798-110I6;0.870386!10786-110H3;0.950487!10591-108D6;0.89734!10593-108D8;0.58795!10590-108D5;0.384075!10026-101D8;0.687377!10096-102C6;0.16262!10168-103B6;0.0987097!10154-103A1;0.392848!10209-103G2;0.283954!10061-101H7;0.789084!10027-101D9;0.661028!10043-101F7;0.288205!10783-110G9;0.403052!10028-101E1;0.92783!10060-101H6;0.729184!10203-103F5;0.563645!10059-101H5;0.838622!10047-101G2;0.814755!10029-101E2;0.961009!10058-101H4;0.995201!10418-106C4;0.862246!10492-107B6;0.71833!10694-109G1;0.201367!10797-110I5;0.411592!10057-101H3;0.833272!10100-102D1;0.839292!10055-101H1;0.801464!10204-103F6;0.799226!10191-103E2;0.944486!10563-108A5;0.668867
|name=motif_GNTACT
|name=motif_GNTACT
|tomtom_result=odd#MA0454.1;2;0.00310878;1.47978;1;6;GATACT;CTGCTACTGTT;-!ovo#MA0126.1;3;0.00781609;3.72046;1;6;GATACT;ACTGTTACT;-!prd#MA0239.1;3;0.00781609;3.72046;1;6;GATACT;ACTGTTACT;-!NKX3-1#MA0124.1;-1;0.013887;6.61023;1;5;GATACT;ATACTTA;+!so#MA0246.1;1;0.0186008;8.854;1;5;GATACT;TGATAC;+
}}
}}

Latest revision as of 13:00, 7 September 2012

Full Name: motif_GNTACT

Motif matrix
POACGT
01001920
0248484848
03000192
04192000
05019200
06000192

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
odd#MA0454.120.003108781.4797816GATACTCTGCTACTGTT-
ovo#MA0126.130.007816093.7204616GATACTACTGTTACT-
prd#MA0239.130.007816093.7204616GATACTACTGTTACT-
NKX3-1#MA0124.1-10.0138876.6102315GATACTATACTTA+
so#MA0246.110.01860088.85415GATACTTGATAC+
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