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MacroAPE 1083:Motif GTNCAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;400;0!02;0;0;0;400!03;100;100;100;100!04;0;400;0;0!05;400;0;0;0!06;0;0;0;400 |macroape_1083_sample_pvalues=11376-118A8;0.859121!11327-...")
 
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48156!10792-110H9;0.552196!10765-110E9;0.699762!10829-111D1;0.890729!10830-111D2;0.941452!10831-111D3;0.911281!10832-111D4;0.790987!10833-111D5;0.699459!10764-110E8;0.996488!10770-110F5;0.70487!10399-106A3;0.887732!10400-106A4;0.842813!10405-106A9;0.790438!10834-111D6;0.838996!10835-111D7;0.801547!10836-111D8;0.456443!10837-111D9;0.832896!10699-109G6;0.76592!10802-111A1;0.770335!10796-110I4;0.840875!10010-101C1;0.813545!10810-111A9;0.543354!10421-106C7;0.502524!10708-109H6;0.561955!12235-129G3;0.685964!12236-129G4;0.85274!12237-129G5;0.352566!10167-103B5;0.893692!10151-102I7;0.91516!10428-106D5;0.823603!10795-110I3;0.806085!10805-111A4;0.829612!10052-101G7;0.910722!10189-103D9;0.873391!10589-108D4;0.624344!10425-106D2;0.30484!10427-106D4;0.994097!10702-109G9;0.653091!10432-106D9;0.978206!10496-107C1;0.964553!10718-109I7;0.85606!10011-101C2;0.854968!10053-101G8;0.536874!10686-109F2;0.567203!10084-102B3;0.0226232!10012-101C3;0.739098!10085-102B4;0.787881!10482-107A5;0.82344!10419-106C5;0.792585!10080-102A8;0.822115!10760-110E4;0.41238!10709-109H7;0.843504!10710-109H8;0.956505!10703-109H1;0.745433!10719-109I8;0.567211!10642-109A3;0.865214!10177-103C6;0.625059!10164-103B2;0.790107!10173-103C2;0.886252!10166-103B4;0.650991!10083-102B2;0.844574!10188-103D8;0.679111!10552-107I3;0.943974!10553-107I4;0.566969!10013-101C4;0.276588!10536-107G5;0.34643!10618-108G6;0.474867!10423-106C9;0.661224!10785-110H2;0.341673!12238-129G6;0.999489!12239-129G7;0.871924!12240-129G8;0.433102!10416-106C2;0.947171!10801-110I9;0.857754!10766-110F1;0.607683!10824-111C5;0.528157!10825-111C6;0.833083!10826-111C7;0.984238!10454-106G4;0.851501!10409-106B4;0.888882!10638-108I8;0.660795!10636-108I6;0.699165!10513-107D9;0.661762!10420-106C6;0.711789!10082-102B1;0.964786!10014-101C5;0.476842!10070-101I7;0.966184!10452-106G2;0.457684!10453-106G3;0.831798!10449-106F8;0.610912!10042-101F6;0.820568!10069-101I6;0.948518!10193-103E4;0.479027!10631-108I1;0.931884!10438-106E6;0.791854!10488-107B2;0.996457!10196-103E7;0.419718!10071-101I8;0.743893!10071-101I8;0.883728!10041-101F5;0.738836!10451-106G1;0.456402!10450-106F9;0.81205!10604-108F1;0.623099!10605-108F2;0.890787!10606-108F3;0.679839!10603-108E9;0.826314!10497-107C2;0.697336!10448-106F7;0.845589!10643-109A4;0.706533!10426-106D3;0.267598!10431-106D8;0.887666!10197-103E8;0.905098!10443-106F2;0.968453!10815-111B5;0.541346!10816-111B6;0.759764!10817-111B7;0.721699!10015-101C6;0.80101!10410-106B5;0.372675!10054-101G9;0.695742!10758-110E2;0.771144!10711-109H9;0.710277!10040-101F4;0.950924!10470-106I2;0.851046!10415-106C1;0.891067!10198-103E9;0.911153!10614-108G2;0.762062!10612-108F9;0.747873!10549-107H9;0.579263!10615-108G3;0.590595!10487-107B1;0.47911!10433-106E1;0.749173!10688-109F4;0.45793!10444-106F3;0.896616!10444-106F3;0.138433!10485-107A8;0.103896!10413-106B8;0.642082!10175-103C4;0.239642!10161-103A8;0.805429!12131-128D7;0.786196!10624-108H3;0.5524!10712-109I1;0.406592!10205-103F7;0.5021!10206-103F8;0.769751!10207-103F9;0.764312!10050-101G5;0.732687!10051-101G6;0.698859!10016-101C7;0.816265!10046-101G1;0.4979!10778-110G4;0.494323!10633-108I3;0.569609!10818-111B8;0.883662!10819-111B9;0.704763!10820-111C1;0.601931!10484-107A7;0.729028!10808-111A7;0.78067!10169-103B7;0.993935!10153-102I9;0.942086!13425-144D5;0.80792!13433-144E4;0.752384!13437-144E8;0.694952!11904-125F5;0.773484!11905-125F6;0.974573!10039-101F3;0.868593!10791-110H8;0.880047!10017-101C8;0.814045!10045-101F9;0.567905!10509-107D5;0.71914!10839-111E2;0.787924!10692-109F8;0.651223!10079-102A7;0.870589!10078-102A6;0.868515!10721-110A1;0.738656!10569-108B2;0.652088!10570-108B3;0.91937!10571-108B4;0.572391!10647-109A8;0.892193!10752-110D5;0.765655!10782-110G8;0.801302!10726-110A6;0.903232!10018-101C9;0.862666!10086-102B5;0.0181884!10182-103D2;0.273234!10165-103B3;0.844486!10499-107C4;0.812461!10408-106B3;0.4243!10019-101D1;0.874039!10068-101I5;0.475368!10075-102A3;0.526272!10077-102A5;0.678393!10727-110A7;0.871663!10775-110G1;0.733198!10412-106B7;0.889081!12231-129F8;0.663434!12232-129F9;0.699077!12233-129G1;0.830308!12234-129G2;0.710347!10414-106B9;0.47709!10170-103B8;0.921911!10183-103D3;0.866106!10150-102I6;0.985666!10174-103C3;0.743181!10155-103A2;0.847546!10038-101F2;0.926305!10838-111E1;0.930017!10759-110E3;0.947529!10514-107E1;0.919586!10465-106H6;0.926169!10691-109F7;0.575116!10843-111E6;0.713413!10844-111E7;0.941807!11747-123G1;0.916684!11748-123G2;0.731747!11749-123G3;0.279912!11750-123G4;0.794892!11751-123G5;0.654367!11840-124H4;0.859291!11752-123G6;0.941669!11753-123G7;0.587678!11754-123G8;0.382398!11755-123G9;0.987778!11756-123H1;0.988381!11833-124G6;0.615831!11760-123H5;0.275032!11836-124G9;0.959986!11758-123H3;0.824693!11835-124G8;0.962875!11762-123H7;0.929128!11838-124H2;0.689072!11757-123H2;0.725163!11759-123H4;0.651374!11761-123H6;0.889029!11842-124H6;0.940603!11837-124H1;0.41559!10568-108B1;0.863934!13230-141I8;0.89957!13231-141I9;0.637701!10696-109G3;0.555836!10493-107B7;0.0885851!10494-107B8;0.63027!10850-111F4;0.673863!10851-111F5;0.865575!10852-111F6;0.774143!10853-111F7;0.752397!10854-111F8;0.690915!10855-111F9;0.734564!10856-111G1;0.941402!10847-111F1;0.706793!10846-111E9;0.595458!10848-111F2;0.94345!10845-111E8;0.755397!10857-111G2;0.984962!10858-111G3;0.962043!10156-103A3;0.563004!11901-125F2;0.752934!11902-125F3;0.408364!11903-125F4;0.445685!10689-109F5;0.517581!10648-109A9;0.78429!10784-110H1;0.660467!10744-110C6;0.879813!10772-110F7;0.461533!10474-106I6;0.744654!10600-108E6;0.563102!10684-109E9;0.753235!12226-129F3;0.9613!12227-129F4;0.829215!10508-107D4;0.937858!10539-107G8;0.75792!10607-108F4;0.810562!10555-107I6;0.601323!10774-110F9;0.716477!10637-108I7;0.892369!10663-109C6;0.909376!10728-110A8;0.662124!10729-110A9;0.400726!10430-106D7;0.546765!10730-110B1;0.998753!10813-111B3;0.853903!10812-111B2;0.642266!10037-101F1;0.290058!10172-103C1;0.879816!10163-103B1;0.892175!10076-102A4;0.729173!10073-102A1;0.970518!10036-101E9;0.766933!10195-103E6;0.850099!10277-104E7;0.942736!10434-106E2;0.900134!10550-107I1;0.744376!10545-107H5;0.942283!10544-107H4;0.48295!10704-109H2;0.871827!10510-107D6;0.808939!10558-107I9;0.920477!10020-101D2;0.101669!10732-110B3;0.774851!10049-101G4;0.501311!10698-109G5;0.159717!10437-106E5;0.569896!10417-106C3;0.576086!10035-101E8;0.97735!10171-103B9;0.822522!10157-103A4;0.939402!10034-101E7;0.805725!10072-101I9;0.82768!10199-103F1;0.777141!10200-103F2;0.257287!10697-109G4;0.353966!10723-110A3;0.369543!10179-103C8;0.905284!10160-103A7;0.82879!10180-103C9;0.949816!10162-103A9;0.53349!10021-101D3;0.877779!10840-111E3;0.221286!10706-109H4;0.701129!10033-101E6;0.361327!10032-101E5;0.899853!10490-107B4;0.86769!10439-106E7;0.484733!10022-101D4;0.467476!10176-103C5;0.487847!10469-106I1;0.926956!10067-101I4;0.545584!10411-106B6;0.691599!10471-106I3;0.98794!10030-101E3;0.535126!10475-106I7;0.905238!10787-110H4;0.768807!10477-106I9;0.454631!10695-109G2;0.387953!11771-123I7;0.995267!11772-123I8;0.768488!11773-123I9;0.796062!10093-102C3;0.879531!10442-106F1;0.524378!10442-106F1;0.464651!10201-103F3;0.369759!10639-108I9;0.694494!11843-124H7;0.400116!11841-124H5;0.392794!10693-109F9;0.995383!10436-106E4;0.348867!10483-107A6;0.841787!10282-104F3;0.580538!10023-101D5;0.6359!10066-101I3;0.389493!10065-101I2;0.393517!10800-110I8;0.365645!10610-108F7;0.77672!10841-111E4;0.470769!10541-107H1;0.410068!10842-111E5;0.553017!10562-108A4;0.459109!10024-101D6;0.753284!10064-101I1;0.65879!10609-108F6;0.5954!10048-101G3;0.696768!10781-110G7;0.461835!10181-103D1;0.35691!10159-103A6;0.983561!10056-101H2;0.895078!10737-110B8;0.801362!10025-101D7;0.887061!10044-101F8;0.612706!10424-106D1;0.431219!10463-106H4;0.736465!10616-108G4;0.689272!10486-107A9;0.925974!10062-101H8;0.731983!10202-103F4;0.660041!10158-103A5;0.53189!10441-106E9;0.727217!10031-101E4;0.829482!10063-101H9;0.919126!10063-101H9;0.726367!11763-123H8;0.841482!11765-123I1;0.774587!11768-123I4;0.973853!10807-111A6;0.69292!10790-110H7;0.84395!10798-110I6;0.745189!10786-110H3;0.606473!10591-108D6;0.530013!10593-108D8;0.304155!10590-108D5;0.0598477!10026-101D8;0.302691!10096-102C6;0.92479!10168-103B6;0.562917!10154-103A1;0.893952!10209-103G2;0.805564!10061-101H7;0.457289!10027-101D9;0.409883!10043-101F7;0.351595!10783-110G9;0.247485!10028-101E1;0.905271!10060-101H6;0.54203!10203-103F5;0.560867!10059-101H5;0.260333!10047-101G2;0.187846!10029-101E2;0.239584!10058-101H4;0.694807!10418-106C4;0.399969!10492-107B6;0.495138!10694-109G1;0.571509!10797-110I5;0.596554!10057-101H3;0.667835!10100-102D1;0.503861!10055-101H1;0.548662!10204-103F6;0.149119!10191-103E2;0.528657!10563-108A5;0.586324
|name=motif_GTNCAT
|name=motif_GTNCAT
|tomtom_result=REST#MA0138.2;5;0.015974;7.6036;1;6;GTACAT;GCGCTGTCCATGGTGCTGA;+!REST#MA0138.2;6;0.0198583;9.45254;1;6;GTACAT;GGCGCTGTCCATGGTGCTGAA;-
}}
}}

Latest revision as of 12:59, 7 September 2012

Full Name: motif_GTNCAT

Motif matrix
POACGT
01004000
02000400
03100100100100
04040000
05400000
06000400

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REST#MA0138.250.0159747.603616GTACATGCGCTGTCCATGGTGCTGA+
REST#MA0138.260.01985839.4525416GTACATGGCGCTGTCCATGGTGCTGAA-
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