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MacroAPE 1083:Motif GNCATT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;2624;0!02;656;656;656;656!03;0;2624;0;0!04;2624;0;0;0!05;0;0;0;2624!06;0;0;0;2624 |macroape_1083_sample_pvalues=11376-118A8;0.0367057!...")
 
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.922978!10809-111A8;0.646536!10597-108E3;0.0404074!10717-109I6;0.132869!10455-106G5;0.10578!10534-107G3;0.0172768!10429-106D6;0.0284375!10464-106H5;0.0115459!10827-111C8;0.512482!10789-110H6;0.129994!10828-111C9;0.437019!10788-110H5;0.0637767!10792-110H9;0.205287!10765-110E9;0.22054!10829-111D1;0.407174!10830-111D2;0.152452!10831-111D3;0.127882!10832-111D4;0.072637!10833-111D5;0.13498!10764-110E8;0.218059!10770-110F5;0.519353!10399-106A3;0.0990021!10400-106A4;0.359572!10405-106A9;0.451074!10834-111D6;0.376359!10835-111D7;0.321583!10836-111D8;0.0126827!10837-111D9;0.00291651!10699-109G6;0.0151083!10802-111A1;0.0166393!10796-110I4;0.0401664!10010-101C1;0.590865!10810-111A9;0.52845!10421-106C7;0.0926099!10708-109H6;0.7701!12235-129G3;0.343601!12236-129G4;0.974081!12237-129G5;0.792469!10167-103B5;0.976864!10151-102I7;0.89109!10428-106D5;0.98356!10795-110I3;0.343196!10805-111A4;0.796684!10052-101G7;0.0723763!10189-103D9;0.457609!10589-108D4;0.735674!10425-106D2;0.066187!10427-106D4;0.0580488!10702-109G9;0.0732853!10432-106D9;0.0451598!10496-107C1;0.305739!10718-109I7;0.124586!10011-101C2;0.535674!10053-101G8;0.643243!10686-109F2;0.82254!10084-102B3;0.270678!10012-101C3;0.706375!10085-102B4;0.739393!10482-107A5;0.897158!10419-106C5;0.162587!10080-102A8;0.1389!10760-110E4;0.564523!10709-109H7;0.588069!10710-109H8;0.290923!10703-109H1;0.419756!10719-109I8;0.263534!10642-109A3;0.489995!10177-103C6;0.0288816!10164-103B2;0.975087!10173-103C2;0.815195!10166-103B4;0.431507!10083-102B2;0.658072!10188-103D8;0.889822!10552-107I3;0.726687!10553-107I4;0.713003!10013-101C4;0.288801!10536-107G5;0.416107!10618-108G6;0.88529!10423-106C9;0.162897!10785-110H2;0.206823!12238-129G6;0.148509!12239-129G7;0.481207!12240-129G8;0.0621081!10416-106C2;0.311441!10801-110I9;0.864435!10766-110F1;0.349937!10824-111C5;0.0902704!10825-111C6;0.0500723!10826-111C7;0.0718585!10454-106G4;0.0432031!10409-106B4;0.123647!10638-108I8;0.00778311!10636-108I6;0.243835!10513-107D9;0.0241564!10420-106C6;0.0367962!10082-102B1;0.0413716!10014-101C5;0.0837013!10070-101I7;0.268224!10452-106G2;0.55039!10453-106G3;0.0173531!10449-106F8;0.0824253!10042-101F6;0.0913931!10069-101I6;0.896418!10193-103E4;0.827444!10631-108I1;0.845746!10438-106E6;0.00208414!10488-107B2;0.878167!10196-103E7;0.840685!10071-101I8;0.745022!10071-101I8;0.598105!10041-101F5;0.799908!10451-106G1;0.367069!10450-106F9;0.0905419!10604-108F1;0.131105!10605-108F2;0.591393!10606-108F3;0.907888!10603-108E9;0.525212!10497-107C2;0.367862!10448-106F7;0.136142!10643-109A4;0.431066!10426-106D3;0.745559!10431-106D8;0.466373!10197-103E8;0.351874!10443-106F2;0.56722!10815-111B5;0.569895!10816-111B6;0.330809!10817-111B7;0.185413!10015-101C6;0.344255!10410-106B5;0.475456!10054-101G9;0.325142!10758-110E2;0.519042!10711-109H9;0.715178!10040-101F4;0.0620365!10470-106I2;0.709881!10415-106C1;0.272741!10198-103E9;0.859417!10614-108G2;0.355345!10612-108F9;0.8827!10549-107H9;0.643908!10615-108G3;0.0718619!10487-107B1;0.0652209!10433-106E1;0.424345!10688-109F4;0.409246!10444-106F3;0.324253!10444-106F3;0.329059!10485-107A8;0.315831!10413-106B8;0.234436!10175-103C4;0.742237!10161-103A8;0.981839!12131-128D7;0.780432!10624-108H3;0.161005!10712-109I1;0.874011!10205-103F7;0.413097!10206-103F8;0.694978!10207-103F9;0.889517!10050-101G5;0.840894!10051-101G6;0.565952!10016-101C7;0.313967!10046-101G1;0.618142!10778-110G4;0.873175!10633-108I3;0.132435!10818-111B8;0.0206808!10819-111B9;0.0527399!10820-111C1;0.0511455!10484-107A7;0.0398957!10808-111A7;0.397444!10169-103B7;0.00148478!10153-102I9;0.940011!13425-144D5;0.990621!13433-144E4;0.109161!13437-144E8;0.102351!11904-125F5;0.116656!11905-125F6;0.0492139!10039-101F3;0.181639!10791-110H8;0.697616!10017-101C8;0.782372!10045-101F9;0.613815!10509-107D5;0.961035!10839-111E2;0.518817!10692-109F8;0.762084!10079-102A7;0.412315!10078-102A6;0.382309!10721-110A1;0.531234!10569-108B2;0.54918!10570-108B3;0.0174363!10571-108B4;0.00566629!10647-109A8;0.0407601!10752-110D5;0.759432!10782-110G8;0.0185068!10726-110A6;0.533874!10018-101C9;0.405602!10086-102B5;0.98751!10182-103D2;0.639825!10165-103B3;0.937084!10499-107C4;0.923401!10408-106B3;0.600523!10019-101D1;0.560938!10068-101I5;0.542536!10075-102A3;0.807476!10077-102A5;0.420464!10727-110A7;0.893827!10775-110G1;0.630532!10412-106B7;0.0104478!12231-129F8;0.114848!12232-129F9;0.399659!12233-129G1;0.330348!12234-129G2;0.562879!10414-106B9;0.144972!10170-103B8;0.221626!10183-103D3;0.989664!10150-102I6;0.901799!10174-103C3;0.886609!10155-103A2;0.799173!10038-101F2;0.99986!10838-111E1;0.707332!10759-110E3;0.0235155!10514-107E1;0.192804!10465-106H6;0.725618!10691-109F7;0.904138!10843-111E6;0.38116!10844-111E7;0.00683998!11747-123G1;0.00430001!11748-123G2;0.167731!11749-123G3;0.0253423!11750-123G4;0.0483352!11751-123G5;0.0566279!11840-124H4;0.0403705!11752-123G6;0.00911102!11753-123G7;0.0719108!11754-123G8;0.098247!11755-123G9;0.122071!11756-123H1;0.15447!11833-124G6;0.205159!11760-123H5;0.0710382!11836-124G9;0.0315506!11758-123H3;0.0522367!11835-124G8;0.012397!11762-123H7;0.0187369!11838-124H2;5.73879e-05!11757-123H2;0.00476694!11759-123H4;0.108891!11761-123H6;0.0456425!11842-124H6;0.0113496!11837-124H1;0.0309923!10568-108B1;0.0507348!13230-141I8;0.60573!13231-141I9;0.0357238!10696-109G3;0.0473604!10493-107B7;0.636124!10494-107B8;0.299077!10850-111F4;0.629771!10851-111F5;0.871811!10852-111F6;0.699986!10853-111F7;0.262586!10854-111F8;0.795614!10855-111F9;0.500885!10856-111G1;0.0427451!10847-111F1;0.769145!10846-111E9;0.719177!10848-111F2;0.874585!10845-111E8;0.7184!10857-111G2;0.345233!10858-111G3;0.925469!10156-103A3;0.481816!11901-125F2;0.94758!11902-125F3;0.0366266!11903-125F4;0.0494159!10689-109F5;0.0953623!10648-109A9;0.612885!10784-110H1;0.941882!10744-110C6;0.167443!10772-110F7;0.966632!10474-106I6;0.372429!10600-108E6;0.387101!10684-109E9;0.110818!12226-129F3;0.852436!12227-129F4;0.690467!10508-107D4;0.647917!10539-107G8;0.0556436!10607-108F4;0.0760912!10555-107I6;0.435036!10774-110F9;0.00910814!10637-108I7;0.301233!10663-109C6;0.0181944!10728-110A8;0.132574!10729-110A9;0.394839!10430-106D7;0.193067!10730-110B1;0.00914309!10813-111B3;0.410795!10812-111B2;0.153886!10037-101F1;0.220056!10172-103C1;0.679757!10163-103B1;0.857608!10076-102A4;0.946784!10073-102A1;0.901105!10036-101E9;0.599632!10195-103E6;0.581134!10277-104E7;0.788554!10434-106E2;0.715662!10550-107I1;0.439402!10545-107H5;0.411423!10544-107H4;0.429816!10704-109H2;0.037917!10510-107D6;0.236605!10558-107I9;0.340339!10020-101D2;0.588663!10732-110B3;0.780737!10049-101G4;0.665957!10698-109G5;0.142862!10437-106E5;0.23575!10417-106C3;0.754152!10035-101E8;0.17664!10171-103B9;0.715306!10157-103A4;0.992592!10034-101E7;0.871414!10072-101I9;0.677649!10199-103F1;0.606351!10200-103F2;0.0939144!10697-109G4;0.714546!10723-110A3;0.265175!10179-103C8;0.864994!10160-103A7;0.679801!10180-103C9;0.618211!10162-103A9;0.978083!10021-101D3;0.921258!10840-111E3;0.224267!10706-109H4;0.276977!10033-101E6;0.804326!10032-101E5;0.691685!10490-107B4;0.715399!10439-106E7;0.556408!10022-101D4;0.195915!10176-103C5;0.268573!10469-106I1;0.962534!10067-101I4;0.121108!10411-106B6;0.719474!10471-106I3;0.696153!10030-101E3;0.513254!10475-106I7;0.523584!10787-110H4;0.136953!10477-106I9;0.0762262!10695-109G2;0.00411176!11771-123I7;0.3743!11772-123I8;0.17532!11773-123I9;0.253623!10093-102C3;0.574813!10442-106F1;0.0217956!10442-106F1;0.874293!10201-103F3;0.942899!10639-108I9;0.714876!11843-124H7;0.0318677!11841-124H5;0.252432!10693-109F9;0.57548!10436-106E4;0.358073!10483-107A6;0.273778!10282-104F3;0.341577!10023-101D5;0.380523!10066-101I3;0.832639!10065-101I2;0.554989!10800-110I8;0.78946!10610-108F7;0.0507204!10841-111E4;0.0221106!10541-107H1;0.0623625!10842-111E5;0.0511759!10562-108A4;0.0266205!10024-101D6;0.0211257!10064-101I1;0.450683!10609-108F6;0.736722!10048-101G3;0.298407!10781-110G7;0.845887!10181-103D1;0.0827638!10159-103A6;0.884453!10056-101H2;0.857585!10737-110B8;0.781943!10025-101D7;0.0730451!10044-101F8;0.847142!10424-106D1;0.867107!10463-106H4;0.247434!10616-108G4;0.603057!10486-107A9;0.317087!10062-101H8;0.333284!10202-103F4;0.573413!10158-103A5;0.354859!10441-106E9;0.741338!10031-101E4;0.000576978!10063-101H9;0.587289!10063-101H9;0.690795!11763-123H8;0.552113!11765-123I1;0.044333!11768-123I4;0.0105224!10807-111A6;0.0419751!10790-110H7;0.00051292!10798-110I6;0.0099729!10786-110H3;0.00149809!10591-108D6;0.0652716!10593-108D8;0.0328231!10590-108D5;0.0666889!10026-101D8;0.180834!10096-102C6;0.245578!10168-103B6;0.627738!10154-103A1;0.832395!10209-103G2;0.853358!10061-101H7;0.732855!10027-101D9;0.670543!10043-101F7;0.375574!10783-110G9;0.622699!10028-101E1;0.345824!10060-101H6;0.282559!10203-103F5;0.960524!10059-101H5;0.772464!10047-101G2;0.855785!10029-101E2;0.461464!10058-101H4;0.252024!10418-106C4;0.528034!10492-107B6;0.032827!10694-109G1;0.817957!10797-110I5;0.60356!10057-101H3;0.975696!10100-102D1;0.355013!10055-101H1;0.331216!10204-103F6;0.606512!10191-103E2;0.948127!10563-108A5;0.591959
|name=motif_GNCATT
|name=motif_GNCATT
|tomtom_result=sd#MA0243.1;0;0.00319306;1.5199;1;6;GACATT;GACATTCCTCGA;+!Sox17#MA0078.1;0;0.00615394;2.92928;1;6;GACATT;TTCATTGTC;+!NFE2L1::MafG#MA0089.1;0;0.0070368;3.34952;1;6;GACATT;GTCATG;-!Dll#MA0187.1;0;0.0127646;6.07594;1;6;GACATT;GTAATTA;-!TEC1#MA0406.1;-1;0.0156297;7.43973;1;5;GACATT;ACATTCCC;+
}}
}}

Latest revision as of 12:53, 7 September 2012

Full Name: motif_GNCATT

Motif matrix
POACGT
010026240
02656656656656
030262400
042624000
050002624
060002624

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
sd#MA0243.100.003193061.519916GACATTGACATTCCTCGA+
Sox17#MA0078.100.006153942.9292816GACATTTTCATTGTC+
NFE2L1::MafG#MA0089.100.00703683.3495216GACATTGTCATG-
Dll#MA0187.100.01276466.0759416GACATTGTAATTA-
TEC1#MA0406.1-10.01562977.4397315GACATTACATTCCC+
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