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MacroAPE 1083:CNhs11068 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;240.6063207970297;561.4882707829333;404.38602159454535;167.11163020885357!2;227.39327488155254;595.0730930953825;98.65734182673637;452.46853...")
 
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5!12184-129A6;0.2337!10809-111A8;0.260995!10597-108E3;0.308981!10717-109I6;0.559242!10455-106G5;0.0220422!10534-107G3;0.01943!10429-106D6;0.0137536!10464-106H5;0.0377586!10827-111C8;0.00903837!10789-110H6;0.0386641!10828-111C9;0.0120657!10788-110H5;0.0847976!10792-110H9;0.00116014!10765-110E9;0.00847865!10829-111D1;0.0114196!10830-111D2;0.0102063!10831-111D3;0.019869!10832-111D4;0.0259385!10833-111D5;0.00499432!10764-110E8;0.0106372!10770-110F5;0.0113441!10399-106A3;0.00578942!10400-106A4;0.018063!10405-106A9;0.0142106!10834-111D6;0.0151698!10835-111D7;0.0181833!10836-111D8;0.0167009!10837-111D9;0.0613966!10699-109G6;0.0412458!10802-111A1;0.0581547!10796-110I4;0.0627165!10010-101C1;0.0179334!10810-111A9;0.0172064!10421-106C7;0.0509166!10708-109H6;0.0157908!12235-129G3;0.0575714!12236-129G4;0.344139!12237-129G5;0.768704!10167-103B5;0.511246!10151-102I7;0.0078651!10428-106D5;0.00787295!10795-110I3;0.44157!10805-111A4;0.00409713!10052-101G7;0.192942!10189-103D9;0.00557958!10589-108D4;0.00445655!10425-106D2;0.321529!10427-106D4;0.893121!10702-109G9;0.00677022!10432-106D9;0.213804!10496-107C1;0.0593738!10718-109I7;0.12097!10011-101C2;0.0139805!10053-101G8;0.00287219!10686-109F2;0.0982663!10084-102B3;0.350611!10012-101C3;0.00360395!10085-102B4;0.0043013!10482-107A5;0.024402!10419-106C5;0.0373922!10080-102A8;0.00584896!10760-110E4;0.0543384!10709-109H7;0.0460529!10710-109H8;0.00568448!10703-109H1;0.0334005!10719-109I8;0.76374!10642-109A3;0.719741!10177-103C6;0.734749!10164-103B2;0.0142484!10173-103C2;0.0185689!10166-103B4;0.048382!10083-102B2;0.0259751!10188-103D8;0.0179255!10552-107I3;0.00461464!10553-107I4;0.00749803!10013-101C4;0.116934!10536-107G5;0.00954826!10618-108G6;0.7227!10423-106C9;0.0598201!10785-110H2;0.0926505!12238-129G6;0.00638612!12239-129G7;0.71582!12240-129G8;0.85388!10416-106C2;0.64998!10801-110I9;0.0181384!10766-110F1;0.0246298!10824-111C5;0.0350263!10825-111C6;0.0171323!10826-111C7;0.0161334!10454-106G4;0.0200503!10409-106B4;0.0168698!10638-108I8;0.0434935!10636-108I6;0.00446703!10513-107D9;0.045107!10420-106C6;0.01531!10082-102B1;0.0995617!10014-101C5;0.000217437!10070-101I7;0.00135474!10452-106G2;0.00202033!10453-106G3;0.029449!10449-106F8;0.0117368!10042-101F6;0.0140348!10069-101I6;0.00153606!10193-103E4;0.00706482!10631-108I1;0.00561594!10438-106E6;0.0206465!10488-107B2;0.0161037!10196-103E7;0.0136752!10071-101I8;0.0113952!10071-101I8;0.00100043!10041-101F5;0.0220632!10451-106G1;0.0105436!10450-106F9;0.0177236!10604-108F1;0.0175402!10605-108F2;0.161917!10606-108F3;0.0878352!10603-108E9;0.163074!10497-107C2;0.104894!10448-106F7;0.0413337!10643-109A4;0.0415351!10426-106D3;0.0985438!10431-106D8;0.0384124!10197-103E8;0.0270993!10443-106F2;0.0176508!10815-111B5;0.0684701!10816-111B6;0.00787789!10817-111B7;0.00818356!10015-101C6;0.00700426!10410-106B5;0.0419949!10054-101G9;0.75222!10758-110E2;0.00280317!10711-109H9;0.222839!10040-101F4;0.0254785!10470-106I2;0.00792351!10415-106C1;0.0140103!10198-103E9;0.0997216!10614-108G2;0.0029182!10612-108F9;0.361622!10549-107H9;0.0488108!10615-108G3;0.0944748!10487-107B1;0.880816!10433-106E1;0.0307097!10688-109F4;0.113019!10444-106F3;0.0374187!10444-106F3;0.929367!10485-107A8;0.818052!10413-106B8;0.196417!10175-103C4;0.636054!10161-103A8;0.00708376!12131-128D7;0.00464663!10624-108H3;0.0980347!10712-109I1;0.789347!10205-103F7;0.0207267!10206-103F8;0.00362484!10207-103F9;0.00375295!10050-101G5;0.00244881!10051-101G6;0.015097!10016-101C7;0.0110959!10046-101G1;0.00541284!10778-110G4;0.00345229!10633-108I3;0.114361!10818-111B8;0.14576!10819-111B9;0.0453783!10820-111C1;0.041799!10484-107A7;0.0443373!10808-111A7;0.0592127!10169-103B7;0.0263248!10153-102I9;0.00897551!13425-144D5;0.00723469!13433-144E4;0.260972!13437-144E8;0.28955!11904-125F5;0.216164!11905-125F6;0.010918!10039-101F3;0.00669336!10791-110H8;0.00601956!10017-101C8;0.0249026!10045-101F9;0.0828022!10509-107D5;0.00914241!10839-111E2;0.0300295!10692-109F8;0.00272166!10079-102A7;0.0409751!10078-102A6;0.00593331!10721-110A1;0.0147372!10569-108B2;0.0641285!10570-108B3;0.0263114!10571-108B4;0.0471582!10647-109A8;0.027215!10752-110D5;0.277609!10782-110G8;0.0583413!10726-110A6;0.212687!10018-101C9;0.166211!10086-102B5;0.840399!10182-103D2;0.40448!10165-103B3;0.00175365!10499-107C4;0.00299398!10408-106B3;0.0147305!10019-101D1;0.00689852!10068-101I5;0.0472005!10075-102A3;0.0268076!10077-102A5;0.0395686!10727-110A7;0.364083!10775-110G1;0.00348979!10412-106B7;0.00172091!12231-129F8;0.163128!12232-129F9;0.103915!12233-129G1;0.025654!12234-129G2;0.0474779!10414-106B9;0.252615!10170-103B8;0.102639!10183-103D3;0.00871732!10150-102I6;0.00778569!10174-103C3;0.00724769!10155-103A2;0.000670302!10038-101F2;0.00196244!10838-111E1;0.00107491!10759-110E3;0.780455!10514-107E1;0.318859!10465-106H6;0.0122629!10691-109F7;0.070648!10843-111E6;0.16533!10844-111E7;0.745287!11747-123G1;0.497151!11748-123G2;0.860132!11749-123G3;0.704091!11750-123G4;0.792912!11751-123G5;0.880352!11840-124H4;0.402946!11752-123G6;0.504168!11753-123G7;0.607766!11754-123G8;0.578858!11755-123G9;0.929418!11756-123H1;0.200015!11833-124G6;0.987943!11760-123H5;0.723559!11836-124G9;0.64108!11758-123H3;0.922256!11835-124G8;0.431011!11762-123H7;0.234198!11838-124H2;0.395737!11757-123H2;0.189674!11759-123H4;0.795177!11761-123H6;0.502854!11842-124H6;0.376086!11837-124H1;0.70177!10568-108B1;0.224469!13230-141I8;0.848662!13231-141I9;0.159593!10696-109G3;0.161582!10493-107B7;0.30031!10494-107B8;0.0466397!10850-111F4;0.782802!10851-111F5;0.213131!10852-111F6;0.954896!10853-111F7;0.655667!10854-111F8;0.0284104!10855-111F9;0.502436!10856-111G1;0.0731495!10847-111F1;0.590736!10846-111E9;0.594613!10848-111F2;0.908655!10845-111E8;0.130371!10857-111G2;0.0358678!10858-111G3;0.0841905!10156-103A3;0.21463!11901-125F2;0.00725319!11902-125F3;0.000333135!11903-125F4;0.000252101!10689-109F5;1.57574e-05!10648-109A9;0.0813693!10784-110H1;0.257075!10744-110C6;0.0302367!10772-110F7;0.0178298!10474-106I6;0.00221727!10600-108E6;0.000708031!10684-109E9;0.117201!12226-129F3;0.185399!12227-129F4;0.0263545!10508-107D4;0.0878734!10539-107G8;0.306101!10607-108F4;0.321366!10555-107I6;0.478891!10774-110F9;0.582906!10637-108I7;0.0292669!10663-109C6;0.929732!10728-110A8;0.304478!10729-110A9;0.188126!10430-106D7;0.156437!10730-110B1;0.0766478!10813-111B3;0.963084!10812-111B2;0.212689!10037-101F1;0.205213!10172-103C1;0.00677917!10163-103B1;0.0147059!10076-102A4;0.00619861!10073-102A1;0.00602835!10036-101E9;0.0427056!10195-103E6;0.00510739!10277-104E7;0.00643361!10434-106E2;0.00417418!10550-107I1;0.071843!10545-107H5;0.0323891!10544-107H4;0.029368!10704-109H2;0.0218194!10510-107D6;0.121087!10558-107I9;0.0206191!10020-101D2;0.276562!10732-110B3;0.00361977!10049-101G4;0.760597!10698-109G5;0.0252034!10437-106E5;0.0670544!10417-106C3;0.0181209!10035-101E8;0.0315468!10171-103B9;0.00513293!10157-103A4;0.00928083!10034-101E7;0.00871075!10072-101I9;0.00548994!10199-103F1;0.0363566!10200-103F2;0.0712209!10697-109G4;0.0068305!10723-110A3;0.447452!10179-103C8;0.0689001!10160-103A7;0.0124716!10180-103C9;0.0229924!10162-103A9;0.0464776!10021-101D3;0.0634674!10840-111E3;0.294539!10706-109H4;0.00404785!10033-101E6;0.172504!10032-101E5;0.00176476!10490-107B4;0.00426011!10439-106E7;0.00220878!10022-101D4;0.0281944!10176-103C5;0.0020352!10469-106I1;0.0156001!10067-101I4;0.0840759!10411-106B6;0.00019751!10471-106I3;0.218573!10030-101E3;0.00379577!10475-106I7;0.00181221!10787-110H4;0.605228!10477-106I9;0.166785!10695-109G2;0.701809!11771-123I7;0.039769!11772-123I8;0.0600507!11773-123I9;0.0237936!10093-102C3;0.171927!10442-106F1;0.038245!10442-106F1;0.0125063!10201-103F3;0.0395837!10639-108I9;0.012412!11843-124H7;0.161159!11841-124H5;0.0914673!10693-109F9;0.195214!10436-106E4;0.311771!10483-107A6;0.0188759!10282-104F3;0.0323408!10023-101D5;0.0879031!10066-101I3;0.0266738!10065-101I2;0.0119659!10800-110I8;0.0166381!10610-108F7;0.790418!10841-111E4;0.533326!10541-107H1;0.475489!10842-111E5;0.159827!10562-108A4;0.693266!10024-101D6;0.590586!10064-101I1;0.00122915!10609-108F6;0.000242895!10048-101G3;0.749926!10781-110G7;0.000917341!10181-103D1;0.816227!10159-103A6;0.00237431!10056-101H2;0.0055351!10737-110B8;0.0012988!10025-101D7;0.229954!10044-101F8;0.326653!10424-106D1;0.0397278!10463-106H4;0.00726389!10616-108G4;0.0210883!10486-107A9;0.020899!10062-101H8;0.0322177!10202-103F4;0.00558834!10158-103A5;0.019125!10441-106E9;0.00139023!10031-101E4;0.152103!10063-101H9;0.00418335!10063-101H9;0.0362016!11763-123H8;0.000632551!11765-123I1;0.18814!11768-123I4;0.19407!10807-111A6;0.252235!10790-110H7;0.340791!10798-110I6;0.0558243!10786-110H3;0.497872!10591-108D6;0.141282!10593-108D8;0.0749665!10590-108D5;0.242343!10026-101D8;0.00728805!10096-102C6;0.543589!10168-103B6;0.252949!10154-103A1;0.00292425!10209-103G2;0.004595!10061-101H7;0.0268747!10027-101D9;0.00662158!10043-101F7;0.22746!10783-110G9;0.672646!10028-101E1;0.0848723!10060-101H6;0.122119!10203-103F5;0.0223679!10059-101H5;0.0442226!10047-101G2;0.0157529!10029-101E2;0.0549314!10058-101H4;0.0438483!10418-106C4;0.00646855!10492-107B6;0.19725!10694-109G1;0.0577101!10797-110I5;0.510584!10057-101H3;0.129725!10100-102D1;0.011747!10055-101H1;0.00929117!10204-103F6;0.00425374!10191-103E2;0.0027593!10563-108A5;0.00730536
|name=CNhs11068_bl_f2
|name=CNhs11068_bl_f2
|tomtom_result=CRZ1#MA0285.1;-1;3.47662e-05;0.0165487;0.0330541;9;CCCCAGCCCC;CTAAGCCAC;+!SP1#MA0079.2;0;0.000694299;0.330486;0.330053;10;CCCCAGCCCC;ACCCCGCCCC;-!ACE2#MA0267.1;-1;0.00224925;1.07064;0.634776;7;CCCCAGCCCC;ACCAGCA;+!Pax4#MA0068.1;15;0.00267062;1.27122;0.634776;10;CCCCAGCCCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!SWI5#MA0402.1;0;0.00395806;1.88404;0.63511;8;CCCCAGCCCC;AACCAGCA;-!BAS1#MA0278.1;0;0.00400804;1.90783;0.63511;10;CCCCAGCCCC;GCACAGCCAGAGTCAAGTCAA;+!SP1#MA0079.2;-1;0.00718348;3.41934;0.892639;9;CCCCAGCCCC;CCCCGCCCCC;+!Tcfcp2l1#MA0145.1;-2;0.00781883;3.72177;0.892639;8;CCCCAGCCCC;CCAGTTCAAACCAG;+!AFT2#MA0270.1;-1;0.00921622;4.38692;0.892639;8;CCCCAGCCCC;CACACCCC;+!Klf4#MA0039.2;1;0.00938875;4.46904;0.892639;9;CCCCAGCCCC;GCCCCACCCA;-!BRCA1#MA0133.1;-2;0.0155555;7.40441;0.998691;7;CCCCAGCCCC;ACAACAC;+!btd#MA0443.1;-2;0.0173602;8.26347;0.998691;8;CCCCAGCCCC;TCCGCCCCCT;-!NHLH1#MA0048.1;0;0.0173857;8.27558;0.998691;10;CCCCAGCCCC;ACGCAGCTGCGC;-!Zfx#MA0146.1;4;0.0210018;9.99687;0.998691;10;CCCCAGCCCC;CAGGCCTCGGCCCC;-
}}
}}

Latest revision as of 12:47, 7 September 2012

Full Name: CNhs11068_bl_f2

Motif matrix
POACGT
1240.6063207970297561.4882707829333404.38602159454535167.11163020885357
2227.39327488155254595.073093095382598.65734182673637452.4685335796906
3408.7917228372953527.7993216082374267.81863715906854169.1825617787617
45.7592802207957791362.18310180319531.74047491421998333.9093864451520073
51373.59224338336370.00.00.0
60.00.01373.59224338336370.0
70.24816319260787851361.58749311074080.248163192607878511.508423887407268
8207.39336181270457924.271973260517511.906181744651143230.02072656548955
9425.1059803858288642.027121274232651.097561271560394255.36158045174128
10272.34106792456896610.7652764469595295.10457860524156195.381320406593

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.1-13.47662e-050.01654870.03305419CCCCAGCCCCCTAAGCCAC+
SP1#MA0079.200.0006942990.3304860.33005310CCCCAGCCCCACCCCGCCCC-
ACE2#MA0267.1-10.002249251.070640.6347767CCCCAGCCCCACCAGCA+
Pax4#MA0068.1150.002670621.271220.63477610CCCCAGCCCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
SWI5#MA0402.100.003958061.884040.635118CCCCAGCCCCAACCAGCA-
BAS1#MA0278.100.004008041.907830.6351110CCCCAGCCCCGCACAGCCAGAGTCAAGTCAA+
SP1#MA0079.2-10.007183483.419340.8926399CCCCAGCCCCCCCCGCCCCC+
Tcfcp2l1#MA0145.1-20.007818833.721770.8926398CCCCAGCCCCCCAGTTCAAACCAG+
AFT2#MA0270.1-10.009216224.386920.8926398CCCCAGCCCCCACACCCC+
Klf4#MA0039.210.009388754.469040.8926399CCCCAGCCCCGCCCCACCCA-
BRCA1#MA0133.1-20.01555557.404410.9986917CCCCAGCCCCACAACAC+
btd#MA0443.1-20.01736028.263470.9986918CCCCAGCCCCTCCGCCCCCT-
NHLH1#MA0048.100.01738578.275580.99869110CCCCAGCCCCACGCAGCTGCGC-
Zfx#MA0146.140.02100189.996870.99869110CCCCAGCCCCCAGGCCTCGGCCCC-
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