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MacroAPE 1083:Motif365: Difference between revisions

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;0.932115!10597-108E3;0.0104678!10717-109I6;0.997419!10455-106G5;0.151532!10534-107G3;0.111199!10429-106D6;0.0683151!10464-106H5;0.0717772!10827-111C8;0.0482577!10789-110H6;0.0591054!10828-111C9;0.161436!10788-110H5;0.193248!10792-110H9;0.0775461!10765-110E9;0.0876457!10829-111D1;0.0632031!10830-111D2;0.0501706!10831-111D3;0.0802958!10832-111D4;0.088348!10833-111D5;0.1005!10764-110E8;0.0929048!10770-110F5;0.190417!10399-106A3;0.114769!10400-106A4;0.0548067!10405-106A9;0.0579957!10834-111D6;0.0463796!10835-111D7;0.0800007!10836-111D8;0.126095!10837-111D9;0.0838048!10699-109G6;0.0825411!10802-111A1;0.0862235!10796-110I4;0.0665201!10010-101C1;0.248038!10810-111A9;0.0745215!10421-106C7;0.0113575!10708-109H6;0.267253!12235-129G3;0.403732!12236-129G4;0.11416!12237-129G5;0.35227!10167-103B5;0.0851657!10151-102I7;0.316671!10428-106D5;0.624222!10795-110I3;0.896203!10805-111A4;0.166748!10052-101G7;0.0220259!10189-103D9;0.0796909!10589-108D4;0.397229!10425-106D2;0.00773856!10427-106D4;0.478201!10702-109G9;0.0656635!10432-106D9;0.0797538!10496-107C1;0.1528!10718-109I7;0.025381!10011-101C2;0.0715888!10053-101G8;0.13622!10686-109F2;0.928372!10084-102B3;0.437496!10012-101C3;0.891544!10085-102B4;0.503677!10482-107A5;0.400802!10419-106C5;0.768855!10080-102A8;0.251831!10760-110E4;0.0531796!10709-109H7;0.55207!10710-109H8;0.317094!10703-109H1;0.822746!10719-109I8;0.111156!10642-109A3;0.0449042!10177-103C6;0.138512!10164-103B2;0.502626!10173-103C2;0.485414!10166-103B4;0.0967198!10083-102B2;0.197508!10188-103D8;0.228405!10552-107I3;0.76694!10553-107I4;0.0246521!10013-101C4;0.182531!10536-107G5;0.227613!10618-108G6;0.608427!10423-106C9;0.877295!10785-110H2;0.543327!12238-129G6;0.471565!12239-129G7;0.0974392!12240-129G8;0.0349236!10416-106C2;0.339018!10801-110I9;0.103898!10766-110F1;0.125901!10824-111C5;0.0537555!10825-111C6;0.0695882!10826-111C7;0.0712055!10454-106G4;0.0627455!10409-106B4;0.043563!10638-108I8;0.0754102!10636-108I6;0.242394!10513-107D9;0.331666!10420-106C6;0.450082!10082-102B1;0.021973!10014-101C5;0.112704!10070-101I7;0.11513!10452-106G2;0.0663069!10453-106G3;0.0449591!10449-106F8;0.0629628!10042-101F6;0.0583368!10069-101I6;0.783438!10193-103E4;0.327729!10631-108I1;0.537336!10438-106E6;0.0661007!10488-107B2;0.595971!10196-103E7;0.176746!10071-101I8;0.257039!10071-101I8;0.10993!10041-101F5;0.0826714!10451-106G1;0.482202!10450-106F9;0.0117827!10604-108F1;0.0171306!10605-108F2;0.139782!10606-108F3;0.446834!10603-108E9;0.173373!10497-107C2;0.203038!10448-106F7;0.994352!10643-109A4;0.685898!10426-106D3;0.457426!10431-106D8;0.103685!10197-103E8;0.371784!10443-106F2;0.496368!10815-111B5;0.325447!10816-111B6;0.184068!10817-111B7;0.164565!10015-101C6;0.225756!10410-106B5;0.0930264!10054-101G9;0.00751655!10758-110E2;0.239255!10711-109H9;0.327427!10040-101F4;0.152338!10470-106I2;0.425637!10415-106C1;0.608729!10198-103E9;0.84352!10614-108G2;0.115842!10612-108F9;0.222511!10549-107H9;0.335823!10615-108G3;0.0140109!10487-107B1;0.110671!10433-106E1;0.0375745!10688-109F4;0.480934!10444-106F3;0.298113!10444-106F3;0.995541!10485-107A8;0.934369!10413-106B8;0.871133!10175-103C4;0.318925!10161-103A8;0.976539!12131-128D7;0.929947!10624-108H3;0.456475!10712-109I1;0.290465!10205-103F7;0.201981!10206-103F8;0.153103!10207-103F9;0.278101!10050-101G5;0.163996!10051-101G6;0.125451!10016-101C7;0.201668!10046-101G1;0.1578!10778-110G4;0.346863!10633-108I3;0.0868197!10818-111B8;0.776933!10819-111B9;0.503038!10820-111C1;0.493565!10484-107A7;0.443668!10808-111A7;0.0651259!10169-103B7;0.125566!10153-102I9;0.363858!13425-144D5;0.669423!13433-144E4;0.564895!13437-144E8;0.714399!11904-125F5;0.73728!11905-125F6;0.798104!10039-101F3;0.181805!10791-110H8;0.486373!10017-101C8;0.220469!10045-101F9;0.110202!10509-107D5;0.114931!10839-111E2;0.0129264!10692-109F8;0.232752!10079-102A7;0.0442799!10078-102A6;0.187311!10721-110A1;0.108078!10569-108B2;0.00589555!10570-108B3;0.169797!10571-108B4;0.132347!10647-109A8;0.762462!10752-110D5;0.487829!10782-110G8;0.0674803!10726-110A6;0.20204!10018-101C9;0.0543139!10086-102B5;0.193316!10182-103D2;0.0457343!10165-103B3;0.910543!10499-107C4;0.79673!10408-106B3;0.594671!10019-101D1;0.184889!10068-101I5;0.0550174!10075-102A3;0.0824475!10077-102A5;0.0917019!10727-110A7;0.290055!10775-110G1;0.153216!10412-106B7;0.1224!12231-129F8;0.12779!12232-129F9;0.0739453!12233-129G1;0.0682676!12234-129G2;0.0862708!10414-106B9;0.072806!10170-103B8;0.0967738!10183-103D3;0.194256!10150-102I6;0.250993!10174-103C3;0.466219!10155-103A2;0.697519!10038-101F2;0.957942!10838-111E1;0.771286!10759-110E3;0.0219122!10514-107E1;0.184203!10465-106H6;0.229402!10691-109F7;0.571342!10843-111E6;0.113001!10844-111E7;0.0205408!11747-123G1;0.0138361!11748-123G2;0.725185!11749-123G3;0.70386!11750-123G4;0.745893!11751-123G5;0.345973!11840-124H4;0.410297!11752-123G6;0.503805!11753-123G7;0.0221678!11754-123G8;0.295051!11755-123G9;0.910417!11756-123H1;0.831814!11833-124G6;0.464478!11760-123H5;0.81347!11836-124G9;0.487014!11758-123H3;0.666156!11835-124G8;0.057612!11762-123H7;0.0876274!11838-124H2;0.0245046!11757-123H2;0.0583444!11759-123H4;0.648378!11761-123H6;0.820189!11842-124H6;0.0120682!11837-124H1;0.0829678!10568-108B1;0.139636!13230-141I8;0.884652!13231-141I9;0.960389!10696-109G3;0.572265!10493-107B7;0.583397!10494-107B8;0.0838717!10850-111F4;0.278716!10851-111F5;0.529452!10852-111F6;0.0702031!10853-111F7;0.31697!10854-111F8;0.984195!10855-111F9;0.2056!10856-111G1;0.0349744!10847-111F1;0.0873919!10846-111E9;0.0764923!10848-111F2;0.110315!10845-111E8;0.594404!10857-111G2;0.140235!10858-111G3;0.987581!10156-103A3;0.271631!11901-125F2;0.509982!11902-125F3;0.749832!11903-125F4;0.418425!10689-109F5;0.879254!10648-109A9;0.913348!10784-110H1;0.979025!10744-110C6;0.26219!10772-110F7;0.140692!10474-106I6;0.0421335!10600-108E6;0.177794!10684-109E9;0.517469!12226-129F3;0.515501!12227-129F4;0.192895!10508-107D4;0.541199!10539-107G8;0.0266226!10607-108F4;0.0480732!10555-107I6;0.0151968!10774-110F9;0.03753!10637-108I7;0.0243083!10663-109C6;0.029702!10728-110A8;0.010051!10729-110A9;0.0126318!10430-106D7;0.0811123!10730-110B1;0.101988!10813-111B3;0.0402725!10812-111B2;0.0362557!10037-101F1;0.0137448!10172-103C1;0.574211!10163-103B1;0.154996!10076-102A4;0.614716!10073-102A1;0.478198!10036-101E9;0.077236!10195-103E6;0.780945!10277-104E7;0.4519!10434-106E2;0.789992!10550-107I1;0.3176!10545-107H5;0.373992!10544-107H4;0.577088!10704-109H2;0.472514!10510-107D6;0.111449!10558-107I9;0.242387!10020-101D2;0.952224!10732-110B3;0.314435!10049-101G4;0.677477!10698-109G5;0.429915!10437-106E5;0.139494!10417-106C3;0.520894!10035-101E8;0.222286!10171-103B9;0.547234!10157-103A4;0.250465!10034-101E7;0.419239!10072-101I9;0.690068!10199-103F1;0.0673259!10200-103F2;0.169811!10697-109G4;0.273498!10723-110A3;0.0262101!10179-103C8;0.229177!10160-103A7;0.174936!10180-103C9;0.0801234!10162-103A9;0.110592!10021-101D3;0.133671!10840-111E3;0.0547093!10706-109H4;0.0890743!10033-101E6;0.0185268!10032-101E5;0.634832!10490-107B4;0.594541!10439-106E7;0.207616!10022-101D4;0.182265!10176-103C5;0.140236!10469-106I1;0.344879!10067-101I4;0.432205!10411-106B6;0.315193!10471-106I3;0.121602!10030-101E3;0.47884!10475-106I7;0.293623!10787-110H4;0.0105779!10477-106I9;0.0430231!10695-109G2;0.0358276!11771-123I7;0.129474!11772-123I8;0.172619!11773-123I9;0.109195!10093-102C3;0.120731!10442-106F1;0.328968!10442-106F1;0.0610719!10201-103F3;0.0462976!10639-108I9;0.372207!11843-124H7;0.190066!11841-124H5;0.0993332!10693-109F9;0.752148!10436-106E4;0.169543!10483-107A6;0.948524!10282-104F3;0.622923!10023-101D5;0.252916!10066-101I3;0.346342!10065-101I2;0.699475!10800-110I8;0.349495!10610-108F7;0.180586!10841-111E4;0.0328675!10541-107H1;0.00721045!10842-111E5;0.0416943!10562-108A4;0.0312255!10024-101D6;0.0926432!10064-101I1;0.138692!10609-108F6;0.0821032!10048-101G3;0.0139829!10781-110G7;0.439447!10181-103D1;0.106978!10159-103A6;0.982919!10056-101H2;0.586754!10737-110B8;0.996629!10025-101D7;0.113094!10044-101F8;0.21881!10424-106D1;0.0762469!10463-106H4;0.0711799!10616-108G4;0.367733!10486-107A9;0.708885!10062-101H8;0.0399909!10202-103F4;0.0888142!10158-103A5;0.338225!10441-106E9;0.892478!10031-101E4;0.0256917!10063-101H9;0.818821!10063-101H9;0.113512!11763-123H8;0.532244!11765-123I1;0.215255!11768-123I4;0.026138!10807-111A6;0.0505709!10790-110H7;0.0753218!10798-110I6;0.0632618!10786-110H3;0.147457!10591-108D6;0.204506!10593-108D8;0.32852!10590-108D5;0.460356!10026-101D8;0.656696!10096-102C6;0.868281!10168-103B6;0.0283324!10154-103A1;0.729787!10209-103G2;0.733598!10061-101H7;0.16141!10027-101D9;0.416243!10043-101F7;0.0635237!10783-110G9;0.257006!10028-101E1;0.723345!10060-101H6;0.0757398!10203-103F5;0.0792909!10059-101H5;0.202014!10047-101G2;0.141752!10029-101E2;0.157774!10058-101H4;0.115988!10418-106C4;0.188895!10492-107B6;0.674786!10694-109G1;0.133054!10797-110I5;0.0505346!10057-101H3;0.123556!10100-102D1;0.118491!10055-101H1;0.45377!10204-103F6;0.216103!10191-103E2;0.0783537!10563-108A5;0.27177
|name=motif365
|name=motif365
|tomtom_result=SP1#MA0079.2;1;9.8484e-06;0.00468784;0.00936341;8;CCCTCCCC;CCCCGCCCCC;+!SP1#MA0079.2;1;0.00096919;0.461334;0.241497;8;CCCTCCCC;ACCCCGCCCC;-!Klf4#MA0039.2;2;0.00101602;0.483627;0.241497;8;CCCTCCCC;GCCCCACCCA;-!btd#MA0443.1;0;0.00101602;0.483627;0.241497;8;CCCTCCCC;TCCGCCCCCT;-!Klf4#MA0039.2;0;0.00414055;1.9709;0.773219;8;CCCTCCCC;CCTTCCTTTA;-!YGR067C#MA0425.1;2;0.00487962;2.3227;0.773219;8;CCCTCCCC;ACCCCACTTTTTTG;+!hkb#MA0450.1;1;0.00585336;2.7862;0.786948;8;CCCTCCCC;TCACGCCCC;-!AFT2#MA0270.1;0;0.00772787;3.67847;0.786948;8;CCCTCCCC;CACACCCC;+!YML081W#MA0431.1;2;0.00775387;3.69084;0.786948;7;CCCTCCCC;ACCCCGCAC;+!RREB1#MA0073.1;12;0.00841743;4.0067;0.786948;8;CCCTCCCC;CCCCAAACCACCCCCCCCCC;+!MZF1_1-4#MA0056.1;-3;0.00910481;4.33389;0.786948;5;CCCTCCCC;TCCCCA;-!UGA3#MA0410.1;1;0.0104463;4.97246;0.794197;7;CCCTCCCC;TCCCGCCG;-!Pax4#MA0068.1;22;0.0108593;5.16905;0.794197;8;CCCTCCCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!MZF1_5-13#MA0057.1;4;0.0184713;8.79234;0.998691;6;CCCTCCCC;TTCCCCCTAC;-!RXR::RAR_DR5#MA0159.1;2;0.0187867;8.94245;0.998691;8;CCCTCCCC;TGACCTCTCCGTGACCT;-
}}
}}

Latest revision as of 12:40, 7 September 2012

Full Name: motif365

Motif matrix
POACGT
0174521364781172514612
02319815993515205614
0327661632357783488
0419913118516104133065
05257315294586466103
06338316145711014326
07469215645016827443
0826323106108978328053

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.219.8484e-060.004687840.009363418CCCTCCCCCCCCGCCCCC+
SP1#MA0079.210.000969190.4613340.2414978CCCTCCCCACCCCGCCCC-
Klf4#MA0039.220.001016020.4836270.2414978CCCTCCCCGCCCCACCCA-
btd#MA0443.100.001016020.4836270.2414978CCCTCCCCTCCGCCCCCT-
Klf4#MA0039.200.004140551.97090.7732198CCCTCCCCCCTTCCTTTA-
YGR067C#MA0425.120.004879622.32270.7732198CCCTCCCCACCCCACTTTTTTG+
hkb#MA0450.110.005853362.78620.7869488CCCTCCCCTCACGCCCC-
AFT2#MA0270.100.007727873.678470.7869488CCCTCCCCCACACCCC+
YML081W#MA0431.120.007753873.690840.7869487CCCTCCCCACCCCGCAC+
RREB1#MA0073.1120.008417434.00670.7869488CCCTCCCCCCCCAAACCACCCCCCCCCC+
MZF1_1-4#MA0056.1-30.009104814.333890.7869485CCCTCCCCTCCCCA-
UGA3#MA0410.110.01044634.972460.7941977CCCTCCCCTCCCGCCG-
Pax4#MA0068.1220.01085935.169050.7941978CCCTCCCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
MZF1_5-13#MA0057.140.01847138.792340.9986916CCCTCCCCTTCCCCCTAC-
RXR::RAR_DR5#MA0159.120.01878678.942450.9986918CCCTCCCCTGACCTCTCCGTGACCT-
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