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MacroAPE 1083:Motif TNGGCA: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;26704!02;6676;6676;6676;6676!03;0;0;26704;0!04;0;0;26704;0!05;0;26704;0;0!06;26704;0;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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503242!10792-110H9;0.913412!10765-110E9;0.703945!10829-111D1;0.336561!10830-111D2;0.606382!10831-111D3;0.82879!10832-111D4;0.596041!10833-111D5;0.439907!10764-110E8;0.439629!10770-110F5;0.145871!10399-106A3;0.564579!10400-106A4;0.293473!10405-106A9;0.271476!10834-111D6;0.241662!10835-111D7;0.558941!10836-111D8;0.673391!10837-111D9;0.777548!10699-109G6;0.297216!10802-111A1;0.451719!10796-110I4;0.176546!10010-101C1;0.273534!10810-111A9;0.245035!10421-106C7;0.301194!10708-109H6;0.147554!12235-129G3;0.205509!12236-129G4;0.456103!12237-129G5;0.362357!10167-103B5;0.646727!10151-102I7;0.6937!10428-106D5;0.551399!10795-110I3;0.105949!10805-111A4;0.295376!10052-101G7;0.144834!10189-103D9;0.0631635!10589-108D4;0.3857!10425-106D2;0.288163!10427-106D4;0.953865!10702-109G9;0.179854!10432-106D9;0.166628!10496-107C1;0.343925!10718-109I7;0.436713!10011-101C2;0.274915!10053-101G8;0.142593!10686-109F2;0.833832!10084-102B3;0.35865!10012-101C3;0.32428!10085-102B4;0.539766!10482-107A5;0.837155!10419-106C5;0.396164!10080-102A8;0.469191!10760-110E4;0.115245!10709-109H7;0.348417!10710-109H8;0.722169!10703-109H1;0.489536!10719-109I8;0.285559!10642-109A3;0.547691!10177-103C6;0.286142!10164-103B2;0.800624!10173-103C2;0.956967!10166-103B4;0.581414!10083-102B2;0.97081!10188-103D8;0.844791!10552-107I3;0.411959!10553-107I4;0.276135!10013-101C4;0.933103!10536-107G5;0.106736!10618-108G6;0.0663579!10423-106C9;0.172005!10785-110H2;0.175118!12238-129G6;0.123214!12239-129G7;0.203475!12240-129G8;0.354742!10416-106C2;0.482052!10801-110I9;0.751133!10766-110F1;0.533988!10824-111C5;0.730666!10825-111C6;0.0842073!10826-111C7;0.113549!10454-106G4;0.0846579!10409-106B4;0.0746832!10638-108I8;0.500626!10636-108I6;0.454317!10513-107D9;0.346162!10420-106C6;0.158741!10082-102B1;0.27901!10014-101C5;0.264931!10070-101I7;0.398848!10452-106G2;0.455204!10453-106G3;0.267731!10449-106F8;0.229874!10042-101F6;0.162952!10069-101I6;0.489455!10193-103E4;0.103678!10631-108I1;0.678333!10438-106E6;0.390372!10488-107B2;0.805767!10196-103E7;0.110202!10071-101I8;0.199094!10071-101I8;0.296993!10041-101F5;0.85967!10451-106G1;0.48472!10450-106F9;0.382652!10604-108F1;0.41362!10605-108F2;0.658687!10606-108F3;0.388802!10603-108E9;0.529059!10497-107C2;0.590177!10448-106F7;0.388673!10643-109A4;0.538822!10426-106D3;0.670127!10431-106D8;0.562419!10197-103E8;0.225673!10443-106F2;0.0744163!10815-111B5;0.163699!10816-111B6;0.17427!10817-111B7;0.125051!10015-101C6;0.164295!10410-106B5;0.0850701!10054-101G9;0.0306549!10758-110E2;0.272375!10711-109H9;0.95269!10040-101F4;0.347119!10470-106I2;0.657409!10415-106C1;0.277215!10198-103E9;0.238668!10614-108G2;0.154152!10612-108F9;0.944481!10549-107H9;0.179841!10615-108G3;0.0576144!10487-107B1;0.223548!10433-106E1;0.26068!10688-109F4;0.726117!10444-106F3;0.573941!10444-106F3;0.837347!10485-107A8;0.95214!10413-106B8;0.669796!10175-103C4;0.333532!10161-103A8;0.953959!12131-128D7;0.672371!10624-108H3;0.34766!10712-109I1;0.514401!10205-103F7;0.401481!10206-103F8;0.100152!10207-103F9;0.0984027!10050-101G5;0.121547!10051-101G6;0.261993!10016-101C7;0.131681!10046-101G1;0.0984219!10778-110G4;0.250622!10633-108I3;0.405431!10818-111B8;0.379971!10819-111B9;0.0191419!10820-111C1;0.0284264!10484-107A7;0.0222029!10808-111A7;0.17031!10169-103B7;0.417806!10153-102I9;0.664363!13425-144D5;0.588829!13433-144E4;0.325787!13437-144E8;0.252562!11904-125F5;0.284458!11905-125F6;0.674704!10039-101F3;0.698307!10791-110H8;0.553158!10017-101C8;0.697648!10045-101F9;0.424531!10509-107D5;0.581023!10839-111E2;0.389922!10692-109F8;0.429079!10079-102A7;0.456083!10078-102A6;0.125916!10721-110A1;0.0912198!10569-108B2;0.212427!10570-108B3;0.270984!10571-108B4;0.686829!10647-109A8;0.536972!10752-110D5;0.0731889!10782-110G8;0.451309!10726-110A6;0.414029!10018-101C9;0.433629!10086-102B5;0.383925!10182-103D2;0.481445!10165-103B3;0.582686!10499-107C4;0.610479!10408-106B3;0.437311!10019-101D1;0.522902!10068-101I5;0.156907!10075-102A3;0.332689!10077-102A5;0.150473!10727-110A7;0.807632!10775-110G1;0.591841!10412-106B7;0.345739!12231-129F8;0.884845!12232-129F9;0.532803!12233-129G1;0.762561!12234-129G2;0.813979!10414-106B9;0.655347!10170-103B8;0.246653!10183-103D3;0.728622!10150-102I6;0.623382!10174-103C3;0.683455!10155-103A2;0.477597!10038-101F2;0.529769!10838-111E1;0.451252!10759-110E3;0.340736!10514-107E1;0.691381!10465-106H6;0.26634!10691-109F7;0.98543!10843-111E6;0.244858!10844-111E7;0.118688!11747-123G1;0.264141!11748-123G2;0.774255!11749-123G3;0.759496!11750-123G4;0.460642!11751-123G5;0.209084!11840-124H4;0.209606!11752-123G6;0.424156!11753-123G7;0.479314!11754-123G8;0.151502!11755-123G9;0.919299!11756-123H1;0.792127!11833-124G6;0.672528!11760-123H5;0.712414!11836-124G9;0.92695!11758-123H3;0.624708!11835-124G8;0.213284!11762-123H7;0.279302!11838-124H2;0.175387!11757-123H2;0.0356371!11759-123H4;0.121343!11761-123H6;0.670972!11842-124H6;0.313694!11837-124H1;0.842619!10568-108B1;0.232457!13230-141I8;0.986798!13231-141I9;0.410889!10696-109G3;0.297196!10493-107B7;0.0824286!10494-107B8;0.209022!10850-111F4;0.931539!10851-111F5;0.504404!10852-111F6;0.983721!10853-111F7;0.539934!10854-111F8;0.474468!10855-111F9;0.569763!10856-111G1;0.154896!10847-111F1;0.888483!10846-111E9;0.956976!10848-111F2;0.37363!10845-111E8;0.536976!10857-111G2;0.438537!10858-111G3;0.690553!10156-103A3;0.43269!11901-125F2;0.583404!11902-125F3;0.604605!11903-125F4;0.345672!10689-109F5;0.350123!10648-109A9;0.293744!10784-110H1;0.0246718!10744-110C6;0.504772!10772-110F7;0.392717!10474-106I6;0.534949!10600-108E6;0.121896!10684-109E9;0.887609!12226-129F3;0.502904!12227-129F4;0.790612!10508-107D4;0.747291!10539-107G8;0.32297!10607-108F4;0.598339!10555-107I6;0.248705!10774-110F9;0.4398!10637-108I7;0.627566!10663-109C6;0.565399!10728-110A8;0.512576!10729-110A9;0.203178!10430-106D7;0.533629!10730-110B1;0.324142!10813-111B3;0.0547985!10812-111B2;0.941982!10037-101F1;0.631622!10172-103C1;0.684504!10163-103B1;0.884728!10076-102A4;0.583079!10073-102A1;0.578674!10036-101E9;0.823133!10195-103E6;0.562192!10277-104E7;0.411632!10434-106E2;0.356115!10550-107I1;0.313121!10545-107H5;0.212091!10544-107H4;0.980379!10704-109H2;0.654612!10510-107D6;0.165349!10558-107I9;0.965767!10020-101D2;0.912368!10732-110B3;0.135718!10049-101G4;0.946215!10698-109G5;0.519268!10437-106E5;0.246634!10417-106C3;0.783951!10035-101E8;0.265889!10171-103B9;0.613478!10157-103A4;0.878293!10034-101E7;0.679037!10072-101I9;0.576741!10199-103F1;0.846844!10200-103F2;0.130855!10697-109G4;0.0795345!10723-110A3;0.426733!10179-103C8;0.695704!10160-103A7;0.733796!10180-103C9;0.95819!10162-103A9;0.742081!10021-101D3;0.669651!10840-111E3;0.296718!10706-109H4;0.0908784!10033-101E6;0.444717!10032-101E5;0.67812!10490-107B4;0.526748!10439-106E7;0.394328!10022-101D4;0.592372!10176-103C5;0.152168!10469-106I1;0.894176!10067-101I4;0.209225!10411-106B6;0.242591!10471-106I3;0.24308!10030-101E3;0.121343!10475-106I7;0.403961!10787-110H4;0.325302!10477-106I9;0.0343046!10695-109G2;0.748516!11771-123I7;0.435758!11772-123I8;0.721115!11773-123I9;0.588164!10093-102C3;0.202601!10442-106F1;0.229952!10442-106F1;0.187271!10201-103F3;0.16112!10639-108I9;0.191145!11843-124H7;0.632921!11841-124H5;0.34309!10693-109F9;0.57509!10436-106E4;0.486617!10483-107A6;0.153953!10282-104F3;0.264272!10023-101D5;0.110217!10066-101I3;0.105747!10065-101I2;0.127491!10800-110I8;0.133479!10610-108F7;0.131915!10841-111E4;0.121314!10541-107H1;0.0819768!10842-111E5;0.227812!10562-108A4;0.513328!10024-101D6;0.342746!10064-101I1;0.589765!10609-108F6;0.471841!10048-101G3;0.289866!10781-110G7;0.0529612!10181-103D1;0.217983!10159-103A6;0.463295!10056-101H2;0.651847!10737-110B8;0.304847!10025-101D7;0.265312!10044-101F8;0.128102!10424-106D1;0.202851!10463-106H4;0.0825962!10616-108G4;0.242012!10486-107A9;0.535289!10062-101H8;0.295722!10202-103F4;0.231503!10158-103A5;0.104631!10441-106E9;0.530641!10031-101E4;0.242222!10063-101H9;0.449739!10063-101H9;0.920937!11763-123H8;0.189822!11765-123I1;0.396854!11768-123I4;0.206305!10807-111A6;0.30009!10790-110H7;0.43348!10798-110I6;0.186262!10786-110H3;0.193062!10591-108D6;0.227138!10593-108D8;0.267131!10590-108D5;0.424549!10026-101D8;0.26437!10096-102C6;0.0614027!10168-103B6;0.940883!10154-103A1;0.74324!10209-103G2;0.599205!10061-101H7;0.0939349!10027-101D9;0.171353!10043-101F7;0.869259!10783-110G9;0.607004!10028-101E1;0.544517!10060-101H6;0.164931!10203-103F5;0.0825659!10059-101H5;0.118962!10047-101G2;0.168327!10029-101E2;0.364647!10058-101H4;0.205926!10418-106C4;0.116104!10492-107B6;0.175043!10694-109G1;0.553607!10797-110I5;0.875069!10057-101H3;0.0619522!10100-102D1;0.152591!10055-101H1;0.169957!10204-103F6;0.162622!10191-103E2;0.0761109!10563-108A5;0.20124
|name=motif_TNGGCA
|name=motif_TNGGCA
|tomtom_result=NFIC#MA0161.1;0;0.000931899;0.443584;0.887168;6;TAGGCA;TTGGCA;+!RIM101#MA0368.1;1;0.00306664;1.45972;1;6;TAGGCA;CTTGGCG;-!MOT3#MA0340.1;0;0.00746878;3.55514;1;6;TAGGCA;TAGGCA;+!TLX1::NFIC#MA0119.1;0;0.00835589;3.97741;1;6;TAGGCA;TTGGCATGGTGCCA;-!CEBPA#MA0102.2;1;0.0144639;6.88482;1;6;TAGGCA;TTTCGCAAT;+!slbo#MA0244.1;0;0.0154979;7.37701;1;6;TAGGCA;TTTGCAAT;-!HAP2#MA0313.1;0;0.0181361;8.63278;1;5;TAGGCA;TTGGT;+!RTG3#MA0376.1;3;0.0201478;9.59034;1;6;TAGGCA;GACTAAGCACGTGCTAATAT;-
}}
}}

Latest revision as of 12:34, 7 September 2012

Full Name: motif_TNGGCA

Motif matrix
POACGT
0100026704
026676667666766676
0300267040
0400267040
0502670400
0626704000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFIC#MA0161.100.0009318990.4435840.8871686TAGGCATTGGCA+
RIM101#MA0368.110.003066641.4597216TAGGCACTTGGCG-
MOT3#MA0340.100.007468783.5551416TAGGCATAGGCA+
TLX1::NFIC#MA0119.100.008355893.9774116TAGGCATTGGCATGGTGCCA-
CEBPA#MA0102.210.01446396.8848216TAGGCATTTCGCAAT+
slbo#MA0244.100.01549797.3770116TAGGCATTTGCAAT-
HAP2#MA0313.100.01813618.6327815TAGGCATTGGT+
RTG3#MA0376.130.02014789.5903416TAGGCAGACTAAGCACGTGCTAATAT-
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