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MacroAPE 1083:Motif895: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;77716;28493;0!02;0;0;0;106209!03;0;0;106209;0!04;0;106209;0;0!05;0;0;0;106209!06;0;0;106209;0 |macroape_1083_sample_pvalues=11376-118A8;...")
 
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0.570469!10429-106D6;0.360125!10464-106H5;0.558875!10827-111C8;0.582012!10789-110H6;0.851542!10828-111C9;0.366222!10788-110H5;0.721735!10792-110H9;0.168643!10765-110E9;0.791163!10829-111D1;0.488767!10830-111D2;0.612665!10831-111D3;0.749519!10832-111D4;0.533652!10833-111D5;0.426491!10764-110E8;0.4198!10770-110F5;0.575422!10399-106A3;0.746915!10400-106A4;0.184402!10405-106A9;0.20435!10834-111D6;0.199236!10835-111D7;0.866706!10836-111D8;0.28926!10837-111D9;0.382815!10699-109G6;0.568739!10802-111A1;0.732307!10796-110I4;0.634444!10010-101C1;0.477328!10810-111A9;0.336286!10421-106C7;0.312086!10708-109H6;0.731245!12235-129G3;0.22594!12236-129G4;0.67057!12237-129G5;0.559372!10167-103B5;0.274458!10151-102I7;0.0478494!10428-106D5;0.0411358!10795-110I3;0.100878!10805-111A4;0.403688!10052-101G7;0.213465!10189-103D9;0.194653!10589-108D4;0.13386!10425-106D2;0.421879!10427-106D4;0.236748!10702-109G9;0.534304!10432-106D9;0.789635!10496-107C1;0.0685991!10718-109I7;0.587889!10011-101C2;0.352328!10053-101G8;0.210445!10686-109F2;0.137!10084-102B3;0.0586018!10012-101C3;0.0275394!10085-102B4;0.038953!10482-107A5;0.152751!10419-106C5;0.28618!10080-102A8;0.265255!10760-110E4;0.361705!10709-109H7;0.173091!10710-109H8;0.108767!10703-109H1;0.270846!10719-109I8;0.590939!10642-109A3;0.498389!10177-103C6;0.594699!10164-103B2;0.0382089!10173-103C2;0.0465393!10166-103B4;0.0396673!10083-102B2;0.0449341!10188-103D8;0.0382396!10552-107I3;0.0647399!10553-107I4;0.28626!10013-101C4;0.20323!10536-107G5;0.173465!10618-108G6;0.14684!10423-106C9;0.655456!10785-110H2;0.256244!12238-129G6;0.252813!12239-129G7;0.346641!12240-129G8;0.337275!10416-106C2;0.320238!10801-110I9;0.995091!10766-110F1;0.373232!10824-111C5;0.451058!10825-111C6;0.283096!10826-111C7;0.249761!10454-106G4;0.231717!10409-106B4;0.440638!10638-108I8;0.256907!10636-108I6;0.0573142!10513-107D9;0.187381!10420-106C6;0.287124!10082-102B1;0.536362!10014-101C5;0.128955!10070-101I7;0.111235!10452-106G2;0.115288!10453-106G3;0.369752!10449-106F8;0.535822!10042-101F6;0.515359!10069-101I6;0.0452795!10193-103E4;0.26696!10631-108I1;0.032884!10438-106E6;0.657065!10488-107B2;0.295066!10196-103E7;0.250481!10071-101I8;0.241253!10071-101I8;0.0997766!10041-101F5;0.190534!10451-106G1;0.0987073!10450-106F9;0.199715!10604-108F1;0.212117!10605-108F2;0.0772771!10606-108F3;0.0431708!10603-108E9;0.065764!10497-107C2;0.065515!10448-106F7;0.201042!10643-109A4;0.092267!10426-106D3;0.0541985!10431-106D8;0.0727245!10197-103E8;0.158724!10443-106F2;0.134996!10815-111B5;0.144002!10816-111B6;0.266438!10817-111B7;0.224447!10015-101C6;0.248322!10410-106B5;0.292541!10054-101G9;0.322358!10758-110E2;0.0722033!10711-109H9;0.0621447!10040-101F4;0.0516682!10470-106I2;0.0382346!10415-106C1;0.0842882!10198-103E9;0.0314829!10614-108G2;0.149405!10612-108F9;0.0425305!10549-107H9;0.151181!10615-108G3;0.234163!10487-107B1;0.831894!10433-106E1;0.360413!10688-109F4;0.0172096!10444-106F3;0.166887!10444-106F3;0.149523!10485-107A8;0.11742!10413-106B8;0.162095!10175-103C4;0.0689733!10161-103A8;0.0326624!12131-128D7;0.0386761!10624-108H3;0.65818!10712-109I1;0.27259!10205-103F7;0.398571!10206-103F8;0.255778!10207-103F9;0.180883!10050-101G5;0.607855!10051-101G6;0.24438!10016-101C7;0.184846!10046-101G1;0.25892!10778-110G4;0.485269!10633-108I3;0.796649!10818-111B8;0.574072!10819-111B9;0.19775!10820-111C1;0.221159!10484-107A7;0.202487!10808-111A7;0.261115!10169-103B7;0.745667!10153-102I9;0.0386089!13425-144D5;0.0389915!13433-144E4;0.478204!13437-144E8;0.726007!11904-125F5;0.745453!11905-125F6;0.409289!10039-101F3;0.107165!10791-110H8;0.0451665!10017-101C8;0.390984!10045-101F9;0.144902!10509-107D5;0.544416!10839-111E2;0.0365117!10692-109F8;0.987315!10079-102A7;0.185712!10078-102A6;0.211711!10721-110A1;0.236477!10569-108B2;0.245708!10570-108B3;0.180375!10571-108B4;0.199527!10647-109A8;0.148402!10752-110D5;0.0199901!10782-110G8;0.239213!10726-110A6;0.493969!10018-101C9;0.266709!10086-102B5;0.135562!10182-103D2;0.313055!10165-103B3;0.0275691!10499-107C4;0.0303559!10408-106B3;0.280646!10019-101D1;0.104102!10068-101I5;0.24211!10075-102A3;0.49356!10077-102A5;0.164014!10727-110A7;0.0732259!10775-110G1;0.978896!10412-106B7;0.33441!12231-129F8;0.284449!12232-129F9;0.205252!12233-129G1;0.290588!12234-129G2;0.211677!10414-106B9;0.555243!10170-103B8;0.250697!10183-103D3;0.0410197!10150-102I6;0.0338944!10174-103C3;0.0322022!10155-103A2;0.0467333!10038-101F2;0.0395691!10838-111E1;0.036245!10759-110E3;0.429211!10514-107E1;0.159431!10465-106H6;0.158664!10691-109F7;0.414834!10843-111E6;0.154737!10844-111E7;0.269446!11747-123G1;0.494858!11748-123G2;0.0848435!11749-123G3;0.129623!11750-123G4;0.25371!11751-123G5;0.187562!11840-124H4;0.67523!11752-123G6;0.851819!11753-123G7;0.611375!11754-123G8;0.730629!11755-123G9;0.0756761!11756-123H1;0.00401832!11833-124G6;0.0105026!11760-123H5;0.360339!11836-124G9;0.0367639!11758-123H3;0.600605!11835-124G8;0.638689!11762-123H7;0.995337!11838-124H2;0.499421!11757-123H2;0.749881!11759-123H4;0.0478996!11761-123H6;0.0783475!11842-124H6;0.254116!11837-124H1;0.418196!10568-108B1;0.814709!13230-141I8;0.0319571!13231-141I9;0.970864!10696-109G3;0.780985!10493-107B7;0.0514582!10494-107B8;0.139146!10850-111F4;0.204189!10851-111F5;0.0609043!10852-111F6;0.145479!10853-111F7;0.162629!10854-111F8;0.111118!10855-111F9;0.190815!10856-111G1;0.627937!10847-111F1;0.220885!10846-111E9;0.119807!10848-111F2;0.211004!10845-111E8;0.11131!10857-111G2;0.13307!10858-111G3;0.303676!10156-103A3;0.204365!11901-125F2;0.0336832!11902-125F3;0.443396!11903-125F4;0.473043!10689-109F5;0.39685!10648-109A9;0.0447594!10784-110H1;0.455161!10744-110C6;0.0930096!10772-110F7;0.682273!10474-106I6;0.212969!10600-108E6;0.149061!10684-109E9;0.0920405!12226-129F3;0.209071!12227-129F4;0.16595!10508-107D4;0.169467!10539-107G8;0.965327!10607-108F4;0.832977!10555-107I6;0.127058!10774-110F9;0.954933!10637-108I7;0.152325!10663-109C6;0.169615!10728-110A8;0.292302!10729-110A9;0.346814!10430-106D7;0.909492!10730-110B1;0.528782!10813-111B3;0.68648!10812-111B2;0.473235!10037-101F1;0.47458!10172-103C1;0.0467872!10163-103B1;0.0318013!10076-102A4;0.0322171!10073-102A1;0.0377304!10036-101E9;0.245017!10195-103E6;0.0371843!10277-104E7;0.0382424!10434-106E2;0.0632919!10550-107I1;0.176386!10545-107H5;0.174454!10544-107H4;0.22045!10704-109H2;0.0900126!10510-107D6;0.107698!10558-107I9;0.051473!10020-101D2;0.496363!10732-110B3;0.23008!10049-101G4;0.0180029!10698-109G5;0.0517534!10437-106E5;0.339065!10417-106C3;0.125289!10035-101E8;0.0259827!10171-103B9;0.0377606!10157-103A4;0.0274613!10034-101E7;0.0361782!10072-101I9;0.0388944!10199-103F1;0.299779!10200-103F2;0.0972235!10697-109G4;0.207854!10723-110A3;0.353643!10179-103C8;0.199431!10160-103A7;0.0171441!10180-103C9;0.0130842!10162-103A9;0.0451785!10021-101D3;0.0346633!10840-111E3;0.130835!10706-109H4;0.546505!10033-101E6;0.0205811!10032-101E5;0.023294!10490-107B4;0.0372874!10439-106E7;0.1509!10022-101D4;0.0851969!10176-103C5;0.186631!10469-106I1;0.0450544!10067-101I4;0.228805!10411-106B6;0.152117!10471-106I3;0.102884!10030-101E3;0.15675!10475-106I7;0.0536084!10787-110H4;0.36721!10477-106I9;0.462614!10695-109G2;0.181257!11771-123I7;0.878721!11772-123I8;0.042342!11773-123I9;0.0427279!10093-102C3;0.0942147!10442-106F1;0.0889622!10442-106F1;0.0283933!10201-103F3;0.0253678!10639-108I9;0.14102!11843-124H7;0.102567!11841-124H5;0.00600652!10693-109F9;0.0192119!10436-106E4;0.262854!10483-107A6;0.205776!10282-104F3;0.260246!10023-101D5;0.151699!10066-101I3;0.338721!10065-101I2;0.317481!10800-110I8;0.348837!10610-108F7;0.286639!10841-111E4;0.875198!10541-107H1;0.401216!10842-111E5;0.473739!10562-108A4;0.649579!10024-101D6;0.710624!10064-101I1;0.0792965!10609-108F6;0.145087!10048-101G3;0.996968!10781-110G7;0.160494!10181-103D1;0.795738!10159-103A6;0.0418432!10056-101H2;0.0541861!10737-110B8;0.0913934!10025-101D7;0.166572!10044-101F8;0.157486!10424-106D1;0.317136!10463-106H4;0.718643!10616-108G4;0.199231!10486-107A9;0.0693398!10062-101H8;0.24796!10202-103F4;0.118114!10158-103A5;0.104271!10441-106E9;0.0383299!10031-101E4;0.152291!10063-101H9;0.0434839!10063-101H9;0.217267!11763-123H8;0.0994602!11765-123I1;0.758785!11768-123I4;0.620068!10807-111A6;0.886953!10790-110H7;0.146917!10798-110I6;0.383302!10786-110H3;0.111586!10591-108D6;0.129501!10593-108D8;0.139068!10590-108D5;0.185162!10026-101D8;0.102012!10096-102C6;0.557949!10168-103B6;0.701337!10154-103A1;0.0389832!10209-103G2;0.0339967!10061-101H7;0.272919!10027-101D9;0.32983!10043-101F7;0.741068!10783-110G9;0.318425!10028-101E1;0.0197324!10060-101H6;0.572333!10203-103F5;0.260528!10059-101H5;0.28024!10047-101G2;0.371267!10029-101E2;0.195937!10058-101H4;0.360909!10418-106C4;0.246619!10492-107B6;0.0442334!10694-109G1;0.0666513!10797-110I5;0.512793!10057-101H3;0.0555612!10100-102D1;0.297073!10055-101H1;0.225044!10204-103F6;0.262299!10191-103E2;0.418282!10563-108A5;0.214382
|name=motif895
|name=motif895
|tomtom_result=CUP2#MA0287.1;5;0.00117993;0.561647;0.454562;6;CTGCTG;CATTTCTGCTG;-!Myf#MA0055.1;6;0.00137645;0.655191;0.454562;6;CTGCTG;CAGCAGCTGCTG;+!SWI5#MA0402.1;-1;0.00188143;0.895562;0.454562;5;CTGCTG;TGCTGGTT;+!ACE2#MA0267.1;-1;0.00191041;0.909355;0.454562;5;CTGCTG;TGCTGGT;-!REST#MA0138.2;12;0.00590929;2.81282;0.810118;6;CTGCTG;GCGCTGTCCATGGTGCTGA;+!NFE2L2#MA0150.1;-1;0.00595826;2.83613;0.810118;5;CTGCTG;TGCTGAGTCAT;-!CTCF#MA0139.1;9;0.00911356;4.33806;0.991468;6;CTGCTG;TAGCGCCCCCTGGTGGCCA;-!REST#MA0138.2;13;0.0093755;4.46274;0.991468;6;CTGCTG;GGCGCTGTCCATGGTGCTGAA;-!opa#MA0456.1;6;0.0115572;5.50125;0.999747;6;CTGCTG;GACCCCCCGCTG;+!NHLH1#MA0048.1;3;0.0149508;7.11659;0.999747;6;CTGCTG;ACGCAGCTGCGC;-!odd#MA0454.1;3;0.0164444;7.82754;0.999747;6;CTGCTG;CTGCTACTGTT;-!BRCA1#MA0133.1;0;0.0176329;8.39328;0.999747;6;CTGCTG;GTGTTGT;-
}}
}}

Latest revision as of 12:32, 7 September 2012

Full Name: motif895

Motif matrix
POACGT
01077716284930
02000106209
03001062090
04010620900
05000106209
06001062090

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CUP2#MA0287.150.001179930.5616470.4545626CTGCTGCATTTCTGCTG-
Myf#MA0055.160.001376450.6551910.4545626CTGCTGCAGCAGCTGCTG+
SWI5#MA0402.1-10.001881430.8955620.4545625CTGCTGTGCTGGTT+
ACE2#MA0267.1-10.001910410.9093550.4545625CTGCTGTGCTGGT-
REST#MA0138.2120.005909292.812820.8101186CTGCTGGCGCTGTCCATGGTGCTGA+
NFE2L2#MA0150.1-10.005958262.836130.8101185CTGCTGTGCTGAGTCAT-
CTCF#MA0139.190.009113564.338060.9914686CTGCTGTAGCGCCCCCTGGTGGCCA-
REST#MA0138.2130.00937554.462740.9914686CTGCTGGGCGCTGTCCATGGTGCTGAA-
opa#MA0456.160.01155725.501250.9997476CTGCTGGACCCCCCGCTG+
NHLH1#MA0048.130.01495087.116590.9997476CTGCTGACGCAGCTGCGC-
odd#MA0454.130.01644447.827540.9997476CTGCTGCTGCTACTGTT-
BRCA1#MA0133.100.01763298.393280.9997476CTGCTGGTGTTGT-
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