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MacroAPE 1083:CNhs11781 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;425.40732249568117;49.146417827690755;430.3476987055014;122.9046747279277!2;27.52836375051615;15.524428481089839;953.1080347866551;31.645286...")
 
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53032!11292-117A5;0.0675179!11369-118A1;0.192031!11441-118I1;0.000108825!10007-101B4;0.0139366!11520-119H8;5.48299e-07!11600-120H7;0.00165966!11681-122H7;0.000471994!11216-116B1;0.000611762!12179-129A1;0.826963!12180-129A2;0.354527!12181-129A3;0.587015!12176-128I7;0.406106!12177-128I8;0.683956!12182-129A4;0.42582!12183-129A5;0.483874!12184-129A6;0.425643!10809-111A8;0.365883!10597-108E3;0.0706045!10717-109I6;0.000277209!10455-106G5;0.0464984!10534-107G3;0.062497!10429-106D6;0.0172422!10464-106H5;0.000776772!10827-111C8;0.00418153!10789-110H6;0.852778!10828-111C9;0.516635!10788-110H5;0.92288!10792-110H9;0.417984!10765-110E9;0.734737!10829-111D1;0.558837!10830-111D2;0.664833!10831-111D3;0.121309!10832-111D4;0.947589!10833-111D5;0.321302!10764-110E8;0.464393!10770-110F5;0.338159!10399-106A3;0.772285!10400-106A4;0.418778!10405-106A9;0.299719!10834-111D6;0.338801!10835-111D7;0.88119!10836-111D8;0.0596098!10837-111D9;0.133801!10699-109G6;0.236323!10802-111A1;0.169753!10796-110I4;0.106101!10010-101C1;0.46024!10810-111A9;0.000372929!10421-106C7;8.40785e-05!10708-109H6;0.353887!12235-129G3;0.000509132!12236-129G4;0.489476!12237-129G5;0.935095!10167-103B5;0.808903!10151-102I7;0.207704!10428-106D5;0.281193!10795-110I3;2.11433e-05!10805-111A4;0.0643378!10052-101G7;0.00578305!10189-103D9;0.0241755!10589-108D4;0.000727803!10425-106D2;0.00165458!10427-106D4;3.46951e-07!10702-109G9;0.0398822!10432-106D9;0.0137024!10496-107C1;0.0413472!10718-109I7;0.710997!10011-101C2;0.386842!10053-101G8;0.00566559!10686-109F2;0.534523!10084-102B3;0.45972!10012-101C3;0.585747!10085-102B4;0.478494!10482-107A5;0.128858!10419-106C5;0.000162851!10080-102A8;0.00400203!10760-110E4;0.020855!10709-109H7;0.361569!10710-109H8;0.128348!10703-109H1;0.00118989!10719-109I8;3.01297e-05!10642-109A3;2.886e-07!10177-103C6;1.77564e-09!10164-103B2;0.397865!10173-103C2;0.180595!10166-103B4;0.0247828!10083-102B2;0.0289097!10188-103D8;0.0898581!10552-107I3;0.57579!10553-107I4;0.00937316!10013-101C4;0.187003!10536-107G5;0.00341608!10618-108G6;0.000469697!10423-106C9;0.00577867!10785-110H2;0.139313!12238-129G6;0.0653403!12239-129G7;0.00028555!12240-129G8;1.03926e-05!10416-106C2;0.000699516!10801-110I9;0.414717!10766-110F1;0.311437!10824-111C5;0.235412!10825-111C6;0.135952!10826-111C7;0.140377!10454-106G4;0.178795!10409-106B4;0.066707!10638-108I8;0.170311!10636-108I6;0.0490339!10513-107D9;0.173499!10420-106C6;0.0679357!10082-102B1;1.68316e-07!10014-101C5;0.000155094!10070-101I7;1.0304e-06!10452-106G2;0.0023954!10453-106G3;1.0939e-10!10449-106F8;2.89626e-08!10042-101F6;2.06262e-08!10069-101I6;0.887771!10193-103E4;0.00584645!10631-108I1;0.559922!10438-106E6;0.0296167!10488-107B2;0.0459088!10196-103E7;0.00235739!10071-101I8;0.0858951!10071-101I8;0.00247274!10041-101F5;0.0812508!10451-106G1;0.0443522!10450-106F9;7.13405e-08!10604-108F1;4.98678e-09!10605-108F2;6.84143e-06!10606-108F3;0.000268989!10603-108E9;2.28324e-06!10497-107C2;0.000216814!10448-106F7;0.487622!10643-109A4;0.000444363!10426-106D3;0.236406!10431-106D8;0.441016!10197-103E8;0.0272576!10443-106F2;8.9618e-05!10815-111B5;0.00866153!10816-111B6;0.0335971!10817-111B7;0.00603006!10015-101C6;0.0258215!10410-106B5;5.98757e-06!10054-101G9;0.00012965!10758-110E2;0.0393137!10711-109H9;0.000475283!10040-101F4;0.00056976!10470-106I2;0.195087!10415-106C1;0.301402!10198-103E9;0.317295!10614-108G2;2.54926e-05!10612-108F9;0.169849!10549-107H9;0.0652921!10615-108G3;1.86928e-08!10487-107B1;1.26347e-06!10433-106E1;0.154819!10688-109F4;0.00145729!10444-106F3;0.0781083!10444-106F3;0.0238619!10485-107A8;0.0202376!10413-106B8;1.81236e-05!10175-103C4;0.000746706!10161-103A8;0.650456!12131-128D7;0.786962!10624-108H3;0.00584256!10712-109I1;0.0175117!10205-103F7;0.413399!10206-103F8;0.011902!10207-103F9;0.0245394!10050-101G5;0.0323931!10051-101G6;0.000503644!10016-101C7;0.00412322!10046-101G1;0.0104775!10778-110G4;0.0932882!10633-108I3;0.0199368!10818-111B8;0.0834223!10819-111B9;0.352478!10820-111C1;0.385217!10484-107A7;0.307326!10808-111A7;0.00424063!10169-103B7;0.275547!10153-102I9;0.354529!13425-144D5;0.393082!13433-144E4;0.0876631!13437-144E8;0.0361513!11904-125F5;0.0414823!11905-125F6;0.00502704!10039-101F3;0.00394557!10791-110H8;0.223446!10017-101C8;0.263469!10045-101F9;4.74179e-07!10509-107D5;0.0142929!10839-111E2;0.00553978!10692-109F8;0.0669503!10079-102A7;0.0367541!10078-102A6;0.00044586!10721-110A1;0.00432785!10569-108B2;0.0314853!10570-108B3;1.10277e-06!10571-108B4;9.55111e-06!10647-109A8;0.000105569!10752-110D5;0.000869713!10782-110G8;0.0376936!10726-110A6;0.685379!10018-101C9;0.00657233!10086-102B5;6.12728e-07!10182-103D2;4.8164e-08!10165-103B3;0.658642!10499-107C4;0.774097!10408-106B3;0.00378975!10019-101D1;0.648685!10068-101I5;1.65496e-05!10075-102A3;0.00620642!10077-102A5;0.000251095!10727-110A7;0.000216123!10775-110G1;0.000164365!10412-106B7;0.0230584!12231-129F8;0.180623!12232-129F9;0.429937!12233-129G1;0.586914!12234-129G2;0.752328!10414-106B9;0.569254!10170-103B8;8.08424e-05!10183-103D3;0.194055!10150-102I6;0.271845!10174-103C3;0.288702!10155-103A2;0.447788!10038-101F2;0.784663!10838-111E1;0.779918!10759-110E3;4.20524e-06!10514-107E1;7.2115e-05!10465-106H6;0.00224816!10691-109F7;0.00025346!10843-111E6;0.224923!10844-111E7;0.000105205!11747-123G1;0.00204454!11748-123G2;0.00560641!11749-123G3;0.0486413!11750-123G4;0.018235!11751-123G5;0.0414134!11840-124H4;0.00218136!11752-123G6;0.000374807!11753-123G7;0.00539522!11754-123G8;0.0181911!11755-123G9;0.0385171!11756-123H1;0.293236!11833-124G6;0.139129!11760-123H5;0.14244!11836-124G9;0.0918182!11758-123H3;0.00221892!11835-124G8;0.00847726!11762-123H7;2.9022e-06!11838-124H2;0.0571897!11757-123H2;0.0132797!11759-123H4;0.111315!11761-123H6;0.046886!11842-124H6;0.22914!11837-124H1;0.190414!10568-108B1;0.00301507!13230-141I8;0.202013!13231-141I9;0.0214389!10696-109G3;0.00944797!10493-107B7;0.561621!10494-107B8;0.0107412!10850-111F4;0.0432969!10851-111F5;0.0339142!10852-111F6;0.164014!10853-111F7;0.886173!10854-111F8;0.0699668!10855-111F9;0.00164181!10856-111G1;0.0442195!10847-111F1;0.192131!10846-111E9;0.00529196!10848-111F2;0.068025!10845-111E8;0.0476781!10857-111G2;0.00420215!10858-111G3;0.383489!10156-103A3;0.376541!11901-125F2;0.300144!11902-125F3;0.0212928!11903-125F4;0.00664967!10689-109F5;0.0510572!10648-109A9;0.0170815!10784-110H1;0.00221065!10744-110C6;0.0616653!10772-110F7;0.0224462!10474-106I6;0.042069!10600-108E6;0.190303!10684-109E9;0.481505!12226-129F3;0.166498!12227-129F4;0.57511!10508-107D4;0.419412!10539-107G8;7.28527e-07!10607-108F4;0.000105615!10555-107I6;0.000115065!10774-110F9;5.12478e-07!10637-108I7;0.00707893!10663-109C6;1.05189e-08!10728-110A8;5.89125e-08!10729-110A9;0.000479847!10430-106D7;0.0547295!10730-110B1;3.47623e-05!10813-111B3;0.000868946!10812-111B2;0.336688!10037-101F1;0.000303006!10172-103C1;0.26825!10163-103B1;0.210842!10076-102A4;0.259218!10073-102A1;0.251547!10036-101E9;0.0373286!10195-103E6;0.291866!10277-104E7;0.368872!10434-106E2;0.971816!10550-107I1;0.0266048!10545-107H5;0.000294212!10544-107H4;0.68141!10704-109H2;0.217656!10510-107D6;0.830674!10558-107I9;0.000634707!10020-101D2;0.000762589!10732-110B3;0.0322886!10049-101G4;0.684997!10698-109G5;0.00462117!10437-106E5;0.0875496!10417-106C3;0.0286387!10035-101E8;0.367858!10171-103B9;0.210644!10157-103A4;0.220852!10034-101E7;0.240595!10072-101I9;0.245012!10199-103F1;0.0334053!10200-103F2;0.000214818!10697-109G4;0.000114995!10723-110A3;3.85909e-06!10179-103C8;0.0677786!10160-103A7;0.789235!10180-103C9;0.304195!10162-103A9;0.163242!10021-101D3;0.0549559!10840-111E3;0.000383802!10706-109H4;0.00949574!10033-101E6;0.131483!10032-101E5;0.390171!10490-107B4;0.284879!10439-106E7;0.0255076!10022-101D4;0.0793257!10176-103C5;0.0151959!10469-106I1;0.0831585!10067-101I4;0.227435!10411-106B6;0.289428!10471-106I3;0.356466!10030-101E3;0.254082!10475-106I7;0.117114!10787-110H4;8.82381e-06!10477-106I9;0.106729!10695-109G2;0.00461256!11771-123I7;0.268206!11772-123I8;0.104134!11773-123I9;0.127619!10093-102C3;0.0356146!10442-106F1;0.000141689!10442-106F1;0.399023!10201-103F3;0.29129!10639-108I9;0.0203235!11843-124H7;0.30019!11841-124H5;0.0344927!10693-109F9;0.000778096!10436-106E4;0.0203162!10483-107A6;0.352054!10282-104F3;0.429575!10023-101D5;0.000395515!10066-101I3;0.000505326!10065-101I2;0.00235064!10800-110I8;0.000795247!10610-108F7;2.99467e-06!10841-111E4;0.00100595!10541-107H1;5.61296e-07!10842-111E5;1.16498e-06!10562-108A4;4.59417e-06!10024-101D6;0.000339033!10064-101I1;8.19674e-08!10609-108F6;0.000222613!10048-101G3;0.000702104!10781-110G7;0.107883!10181-103D1;2.62358e-05!10159-103A6;0.698002!10056-101H2;0.913812!10737-110B8;0.53586!10025-101D7;0.174031!10044-101F8;2.37124e-05!10424-106D1;0.000104085!10463-106H4;0.090265!10616-108G4;0.0557253!10486-107A9;0.781156!10062-101H8;0.231721!10202-103F4;0.0603378!10158-103A5;0.000753252!10441-106E9;0.772969!10031-101E4;5.76821e-06!10063-101H9;0.46064!10063-101H9;0.0355701!11763-123H8;0.000933598!11765-123I1;0.00103663!11768-123I4;0.000211654!10807-111A6;0.000449309!10790-110H7;0.0450215!10798-110I6;0.00067262!10786-110H3;0.200972!10591-108D6;0.13005!10593-108D8;0.0465229!10590-108D5;0.0158808!10026-101D8;0.0133509!10096-102C6;0.000395939!10168-103B6;0.101203!10154-103A1;0.747013!10209-103G2;0.565913!10061-101H7;2.97625e-06!10027-101D9;0.0129621!10043-101F7;0.488222!10783-110G9;0.73104!10028-101E1;0.0694593!10060-101H6;0.000563171!10203-103F5;0.0268572!10059-101H5;1.70826e-06!10047-101G2;8.7348e-05!10029-101E2;6.16593e-10!10058-101H4;2.99167e-07!10418-106C4;0.00242571!10492-107B6;0.000402737!10694-109G1;0.000456845!10797-110I5;0.688158!10057-101H3;1.33892e-06!10100-102D1;0.000345045!10055-101H1;0.0233537!10204-103F6;0.0358246!10191-103E2;0.202291!10563-108A5;0.00027317
|name=CNhs11781_bu_f1
|name=CNhs11781_bu_f1
|tomtom_result=ESR1#MA0112.2;7;0.00198351;0.94415;1;12;GGAGCCCAGGGT;AGGTCAGGGTGACCTGGGCC;-!ESR1#MA0112.2;-1;0.00243458;1.15886;1;11;GGAGCCCAGGGT;GGGGTCACGGTGACCTGG;-!NRG1#MA0347.1;7;0.00640927;3.05081;1;12;GGAGCCCAGGGT;CTAGATCAGGGTCCATCGCA;+!GAL4#MA0299.1;1;0.00864787;4.11638;1;12;GGAGCCCAGGGT;CGGGGAACAGTACTC;+!Esrrb#MA0141.1;-2;0.0100505;4.78403;1;10;GGAGCCCAGGGT;AGCTCAAGGTCA;+!YJL103C#MA0427.1;-1;0.0105465;5.02013;1;11;GGAGCCCAGGGT;AGCTCCGGAGA;+!Zfp423#MA0116.1;0;0.0105517;5.0226;1;12;GGAGCCCAGGGT;GGCACCCAGGGGTGC;+!ACE2#MA0267.1;-4;0.0124737;5.93747;1;7;GGAGCCCAGGGT;ACCAGCA;+!SKN7#MA0381.1;-3;0.0143465;6.82892;1;6;GGAGCCCAGGGT;GGCCAT;+!Ar#MA0007.1;2;0.0146633;6.97974;1;12;GGAGCCCAGGGT;GGCGGGTACACGATGTTCTTAT;-
}}
}}

Latest revision as of 12:31, 7 September 2012

Full Name: CNhs11781_bu_f1

Motif matrix
POACGT
1425.4073224956811749.146417827690755430.3476987055014122.9046747279277
227.5283637505161515.524428481089839953.108034786655131.64528673853927
3410.3471445118411164.84484325660233190.68707924206748261.9270467462904
412.14876866745612114.83535838298691854.044077330340846.777909376017725
5151.90434362503615344.3764585822885236.6046315231193294.9206800263573
62.9092634098204257911.956083786727731.85961087560472381.08115568464797
711.4659210116981441016.17528267539360.00.1649100697088427
81027.4524926720810.00.091005223102428660.2626158616168528
935.7670295919598773.59325031173536896.203137516448622.24269633665699
10156.27693423140806205.64986532484306566.846170260950199.03314393959937
11294.8226750086851232.42141033785646418.152884065143982.40914434511544
12147.63289502527405125.06331317192313153.7727661875205601.3371393720836

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ESR1#MA0112.270.001983510.94415112GGAGCCCAGGGTAGGTCAGGGTGACCTGGGCC-
ESR1#MA0112.2-10.002434581.15886111GGAGCCCAGGGTGGGGTCACGGTGACCTGG-
NRG1#MA0347.170.006409273.05081112GGAGCCCAGGGTCTAGATCAGGGTCCATCGCA+
GAL4#MA0299.110.008647874.11638112GGAGCCCAGGGTCGGGGAACAGTACTC+
Esrrb#MA0141.1-20.01005054.78403110GGAGCCCAGGGTAGCTCAAGGTCA+
YJL103C#MA0427.1-10.01054655.02013111GGAGCCCAGGGTAGCTCCGGAGA+
Zfp423#MA0116.100.01055175.0226112GGAGCCCAGGGTGGCACCCAGGGGTGC+
ACE2#MA0267.1-40.01247375.9374717GGAGCCCAGGGTACCAGCA+
SKN7#MA0381.1-30.01434656.8289216GGAGCCCAGGGTGGCCAT+
Ar#MA0007.120.01466336.97974112GGAGCCCAGGGTGGCGGGTACACGATGTTCTTAT-
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