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MacroAPE 1083:CNhs12028 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;15.806627698714324;217.25071629374253;142.1781641274227;148.0860307678317!2;33.299496471165035;309.85607122940235;29.626724112824206;150.539...")
 
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6;0.0286947!10455-106G5;0.994132!10534-107G3;0.870939!10429-106D6;0.165005!10464-106H5;0.074289!10827-111C8;0.253175!10789-110H6;0.253951!10828-111C9;0.402627!10788-110H5;0.290381!10792-110H9;0.552641!10765-110E9;0.320656!10829-111D1;0.861161!10830-111D2;0.900433!10831-111D3;0.18209!10832-111D4;0.475753!10833-111D5;0.355265!10764-110E8;0.414705!10770-110F5;0.0454236!10399-106A3;0.925441!10400-106A4;0.194564!10405-106A9;0.190036!10834-111D6;0.123343!10835-111D7;0.572485!10836-111D8;0.411059!10837-111D9;0.075662!10699-109G6;0.987075!10802-111A1;0.922702!10796-110I4;0.303812!10010-101C1;0.678952!10810-111A9;0.00987889!10421-106C7;0.0118236!10708-109H6;0.356218!12235-129G3;0.0125621!12236-129G4;0.167954!12237-129G5;0.835589!10167-103B5;0.0852206!10151-102I7;0.941838!10428-106D5;0.994593!10795-110I3;0.000862862!10805-111A4;0.422873!10052-101G7;0.0656578!10189-103D9;0.00171343!10589-108D4;0.000187736!10425-106D2;0.0905708!10427-106D4;0.0263085!10702-109G9;0.547333!10432-106D9;0.717774!10496-107C1;0.432964!10718-109I7;0.4925!10011-101C2;0.591635!10053-101G8;0.00405785!10686-109F2;0.0644042!10084-102B3;0.0208653!10012-101C3;0.605983!10085-102B4;0.493755!10482-107A5;0.293871!10419-106C5;0.0219032!10080-102A8;0.0367605!10760-110E4;0.0739517!10709-109H7;0.924274!10710-109H8;0.627631!10703-109H1;0.5996!10719-109I8;0.021275!10642-109A3;0.0596478!10177-103C6;0.00799223!10164-103B2;0.659746!10173-103C2;0.873201!10166-103B4;0.595958!10083-102B2;0.725195!10188-103D8;0.976124!10552-107I3;0.413422!10553-107I4;0.149275!10013-101C4;0.273504!10536-107G5;0.0108402!10618-108G6;0.000379825!10423-106C9;0.227967!10785-110H2;0.310499!12238-129G6;0.434539!12239-129G7;0.0824996!12240-129G8;0.727146!10416-106C2;0.0676558!10801-110I9;0.370099!10766-110F1;0.9915!10824-111C5;0.949686!10825-111C6;0.762391!10826-111C7;0.868837!10454-106G4;0.805045!10409-106B4;0.716185!10638-108I8;0.720467!10636-108I6;0.0887521!10513-107D9;0.298032!10420-106C6;0.111352!10082-102B1;0.00360951!10014-101C5;0.0471946!10070-101I7;0.0109901!10452-106G2;0.0655647!10453-106G3;0.023827!10449-106F8;0.0331708!10042-101F6;0.0571717!10069-101I6;0.15891!10193-103E4;0.0355927!10631-108I1;0.541347!10438-106E6;0.668376!10488-107B2;0.558728!10196-103E7;0.162766!10071-101I8;0.0231071!10071-101I8;0.0372985!10041-101F5;0.112579!10451-106G1;0.00229395!10450-106F9;0.000245589!10604-108F1;0.0038281!10605-108F2;0.012262!10606-108F3;0.0161103!10603-108E9;0.0100117!10497-107C2;0.0148941!10448-106F7;0.386672!10643-109A4;0.101099!10426-106D3;0.427442!10431-106D8;0.986028!10197-103E8;0.0494862!10443-106F2;0.00380359!10815-111B5;0.00807043!10816-111B6;0.0768383!10817-111B7;0.0406647!10015-101C6;0.0763658!10410-106B5;0.00262664!10054-101G9;0.0828646!10758-110E2;0.024362!10711-109H9;0.0227857!10040-101F4;0.0437121!10470-106I2;0.910249!10415-106C1;0.442692!10198-103E9;0.461593!10614-108G2;0.000311593!10612-108F9;0.0669196!10549-107H9;0.379123!10615-108G3;0.0237526!10487-107B1;0.0241009!10433-106E1;0.78804!10688-109F4;0.0166339!10444-106F3;0.776296!10444-106F3;0.00825729!10485-107A8;0.0114303!10413-106B8;0.00993292!10175-103C4;0.0114896!10161-103A8;0.661605!12131-128D7;0.58479!10624-108H3;0.0427733!10712-109I1;0.00179579!10205-103F7;0.983792!10206-103F8;0.0252115!10207-103F9;0.0114496!10050-101G5;0.185336!10051-101G6;0.00356824!10016-101C7;0.000314837!10046-101G1;0.0157456!10778-110G4;0.117429!10633-108I3;0.546135!10818-111B8;0.0186845!10819-111B9;0.438915!10820-111C1;0.482181!10484-107A7;0.398165!10808-111A7;0.0160248!10169-103B7;0.813134!10153-102I9;0.822936!13425-144D5;0.779872!13433-144E4;0.065467!13437-144E8;0.0519501!11904-125F5;0.0640162!11905-125F6;0.890775!10039-101F3;0.67071!10791-110H8;0.882224!10017-101C8;0.392763!10045-101F9;0.0227216!10509-107D5;0.12983!10839-111E2;0.0475085!10692-109F8;0.627648!10079-102A7;0.0184679!10078-102A6;0.000570858!10721-110A1;0.00459213!10569-108B2;0.0200656!10570-108B3;0.566322!10571-108B4;0.441714!10647-109A8;0.896071!10752-110D5;0.000337163!10782-110G8;0.140242!10726-110A6;0.00458667!10018-101C9;0.0481579!10086-102B5;0.00881968!10182-103D2;0.0634409!10165-103B3;0.723497!10499-107C4;0.452144!10408-106B3;0.193429!10019-101D1;0.295784!10068-101I5;0.00104069!10075-102A3;0.0240889!10077-102A5;0.000917944!10727-110A7;9.91786e-05!10775-110G1;0.7039!10412-106B7;0.827513!12231-129F8;0.678236!12232-129F9;0.389711!12233-129G1;0.998418!12234-129G2;0.82173!10414-106B9;0.353616!10170-103B8;0.0182808!10183-103D3;0.925049!10150-102I6;0.861825!10174-103C3;0.845481!10155-103A2;0.0759575!10038-101F2;0.112214!10838-111E1;0.0747729!10759-110E3;0.0120862!10514-107E1;0.00455021!10465-106H6;0.0413228!10691-109F7;0.153597!10843-111E6;0.518371!10844-111E7;0.00536664!11747-123G1;0.0399889!11748-123G2;0.805988!11749-123G3;0.345785!11750-123G4;0.98186!11751-123G5;0.848673!11840-124H4;0.50412!11752-123G6;0.225562!11753-123G7;0.807954!11754-123G8;0.746635!11755-123G9;0.963704!11756-123H1;0.439689!11833-124G6;0.411641!11760-123H5;0.449406!11836-124G9;0.20643!11758-123H3;0.420594!11835-124G8;0.841923!11762-123H7;0.697075!11838-124H2;0.680119!11757-123H2;0.714935!11759-123H4;0.805293!11761-123H6;0.419424!11842-124H6;0.805613!11837-124H1;0.446999!10568-108B1;0.895305!13230-141I8;0.0945149!13231-141I9;0.389542!10696-109G3;0.495746!10493-107B7;0.134894!10494-107B8;0.127544!10850-111F4;0.534009!10851-111F5;0.0280137!10852-111F6;0.015498!10853-111F7;0.0709129!10854-111F8;5.29137e-05!10855-111F9;0.00364025!10856-111G1;0.343074!10847-111F1;0.307701!10846-111E9;0.025219!10848-111F2;0.0322719!10845-111E8;0.132608!10857-111G2;0.0104367!10858-111G3;0.200563!10156-103A3;0.00145805!11901-125F2;0.871124!11902-125F3;0.336208!11903-125F4;0.773981!10689-109F5;0.885206!10648-109A9;0.000128007!10784-110H1;0.00399552!10744-110C6;0.169438!10772-110F7;0.820391!10474-106I6;0.0710404!10600-108E6;0.122439!10684-109E9;0.0076343!12226-129F3;0.0727092!12227-129F4;0.570315!10508-107D4;0.273464!10539-107G8;0.0105185!10607-108F4;0.0137577!10555-107I6;0.0502737!10774-110F9;0.00398396!10637-108I7;0.224855!10663-109C6;0.179979!10728-110A8;0.0699162!10729-110A9;0.0824504!10430-106D7;0.234086!10730-110B1;0.0255166!10813-111B3;0.0970104!10812-111B2;0.106612!10037-101F1;0.277759!10172-103C1;0.785844!10163-103B1;0.9241!10076-102A4;0.931319!10073-102A1;0.953905!10036-101E9;0.0839204!10195-103E6;0.800057!10277-104E7;0.643737!10434-106E2;0.721321!10550-107I1;0.305948!10545-107H5;0.0121529!10544-107H4;0.337765!10704-109H2;0.645171!10510-107D6;0.126493!10558-107I9;0.00344827!10020-101D2;0.0124132!10732-110B3;0.00176588!10049-101G4;0.0205718!10698-109G5;0.00806295!10437-106E5;0.407644!10417-106C3;0.0312893!10035-101E8;0.827823!10171-103B9;0.826218!10157-103A4;0.855614!10034-101E7;0.807188!10072-101I9;0.816825!10199-103F1;0.0794713!10200-103F2;0.00322376!10697-109G4;0.00350079!10723-110A3;0.32611!10179-103C8;0.921062!10160-103A7;0.730433!10180-103C9;0.641584!10162-103A9;0.502177!10021-101D3;0.903217!10840-111E3;0.00936668!10706-109H4;0.825118!10033-101E6;0.0108713!10032-101E5;0.399185!10490-107B4;0.700179!10439-106E7;0.201142!10022-101D4;0.153984!10176-103C5;0.00357093!10469-106I1;0.930698!10067-101I4;0.109928!10411-106B6;0.85397!10471-106I3;0.433633!10030-101E3;0.895445!10475-106I7;0.00485952!10787-110H4;0.0377985!10477-106I9;0.0781789!10695-109G2;0.0199377!11771-123I7;0.0300986!11772-123I8;0.173452!11773-123I9;0.176712!10093-102C3;0.203039!10442-106F1;0.00136588!10442-106F1;0.0852686!10201-103F3;0.0835328!10639-108I9;0.00228852!11843-124H7;0.0107628!11841-124H5;0.00673383!10693-109F9;0.00529623!10436-106E4;0.10377!10483-107A6;0.700266!10282-104F3;0.671006!10023-101D5;0.0219618!10066-101I3;0.0257653!10065-101I2;0.0631893!10800-110I8;0.0133045!10610-108F7;0.00511185!10841-111E4;0.101414!10541-107H1;0.0192233!10842-111E5;0.0208907!10562-108A4;0.0119509!10024-101D6;0.00462665!10064-101I1;0.002305!10609-108F6;0.0277269!10048-101G3;0.288229!10781-110G7;0.0621792!10181-103D1;0.0416169!10159-103A6;0.150973!10056-101H2;0.206247!10737-110B8;0.453988!10025-101D7;0.12109!10044-101F8;0.00140294!10424-106D1;0.000420962!10463-106H4;0.621522!10616-108G4;0.61088!10486-107A9;0.633703!10062-101H8;0.828083!10202-103F4;0.159125!10158-103A5;0.00227983!10441-106E9;0.125693!10031-101E4;0.0120981!10063-101H9;0.615466!10063-101H9;0.102992!11763-123H8;0.0082691!11765-123I1;0.579837!11768-123I4;0.248773!10807-111A6;0.401174!10790-110H7;0.0199163!10798-110I6;0.0441957!10786-110H3;0.185841!10591-108D6;0.136992!10593-108D8;0.0698031!10590-108D5;0.0401034!10026-101D8;0.0652016!10096-102C6;0.111418!10168-103B6;0.236023!10154-103A1;0.445737!10209-103G2;0.518026!10061-101H7;0.00184586!10027-101D9;0.0509877!10043-101F7;0.0100231!10783-110G9;0.00440675!10028-101E1;0.000158219!10060-101H6;0.022235!10203-103F5;0.110687!10059-101H5;0.00204771!10047-101G2;0.0210768!10029-101E2;0.000162985!10058-101H4;0.000966109!10418-106C4;0.0209215!10492-107B6;0.00419346!10694-109G1;0.0289046!10797-110I5;0.0156446!10057-101H3;0.0098089!10100-102D1;0.00751932!10055-101H1;0.0387885!10204-103F6;0.248175!10191-103E2;0.200468!10563-108A5;0.000454004
|name=CNhs12028_bl_f2
|name=CNhs12028_bl_f2
|tomtom_result=YJL103C#MA0427.1;-1;0.000184612;0.0878754;0.175335;11;CCCTCTGGAGCC;TCTCCGGAGCT;-!CTCF#MA0139.1;5;0.000701534;0.33393;0.220083;12;CCCTCTGGAGCC;TAGCGCCCCCTGGTGGCCA;-!REI1#MA0364.1;-1;0.000926911;0.44121;0.220083;7;CCCTCTGGAGCC;CCCCTGA;+!EBF1#MA0154.1;-1;0.00120429;0.573243;0.228755;10;CCCTCTGGAGCC;TCCCTTGGGT;-!USV1#MA0413.1;5;0.00202292;0.962911;0.320211;12;CCCTCTGGAGCC;AAATTCCCCCTGAATTTGTG;+!SOK2#MA0385.1;-1;0.00325671;1.55019;0.441865;11;CCCTCTGGAGCC;TGCCTGCAGGT;-!YGR067C#MA0425.1;2;0.00577347;2.74817;0.685418;12;CCCTCTGGAGCC;ACCCCACTTTTTTG;+!PLAG1#MA0163.1;0;0.00653953;3.11282;0.690101;12;CCCTCTGGAGCC;CCCCCTTGGGCCCC;-!Tal1::Gata1#MA0140.1;-4;0.00758383;3.6099;0.69351;8;CCCTCTGGAGCC;CTGGTGGGGACAGATAAG;+!RME1#MA0370.1;1;0.00803224;3.82334;0.69351;9;CCCTCTGGAGCC;TTCCTTTGGA;-!PHD1#MA0355.1;-2;0.01029;4.89802;0.798728;10;CCCTCTGGAGCC;ACCTGCAGCA;+!RUNX1#MA0002.2;-2;0.0109329;5.20404;0.798728;10;CCCTCTGGAGCC;GTCTGTGGTTT;+!SIP4#MA0380.1;-2;0.0121619;5.78905;0.825052;7;CCCTCTGGAGCC;CTCCGGA;+!ELK1#MA0028.1;-1;0.0130848;6.22839;0.828488;10;CCCTCTGGAGCC;CTTCCGGCTC;-!sna#MA0086.1;-1;0.0172849;8.22759;0.830143;6;CCCTCTGGAGCC;CACCTG;-!GSM1#MA0308.1;2;0.0178306;8.48735;0.830143;12;CCCTCTGGAGCC;TATACTCCGGAGTTTTTTAAT;-!Pax5#MA0014.1;7;0.0195355;9.29887;0.830143;12;CCCTCTGGAGCC;CCGCTACGCTTCAGTGCTCT;-!Hand1::Tcfe2a#MA0092.1;-1;0.0195821;9.32106;0.830143;10;CCCTCTGGAGCC;GGTCTGGCAT;+!MET28#MA0332.1;-4;0.0196037;9.33135;0.830143;6;CCCTCTGGAGCC;CTGTGG;+!RGM1#MA0366.1;-1;0.0201109;9.57277;0.830143;5;CCCTCTGGAGCC;CCCCT;-!GIS1#MA0306.1;0;0.0209776;9.98533;0.830143;9;CCCTCTGGAGCC;ACCCCTAAA;+
}}
}}

Latest revision as of 12:30, 7 September 2012

Full Name: CNhs12028_bl_f2

Motif matrix
POACGT
115.806627698714324217.25071629374253142.1781641274227148.0860307678317
233.299496471165035309.8560712294023529.626724112824206150.53924707431966
366.81714296952656293.732451577284451.3097211649365703161.46222317596357
40.4199396869050307254.46947351973141.3604881336719115267.0716375474027
50.0523.32153888771070.00.0
60.00.00.0523.3215388877107
70.00.0523.32153888771070.0
862.19979452810030669.44086889816717252.99634164300116138.6845338184426
9228.2930011847431360.965150431569384189.1522134215254344.91117384987327
1090.31574541547063110.91592689294616233.637267864585788.45259871470863
1134.402688045260454206.20826008192049160.97383718626585121.7367535742644
1281.6206066088987229.1451079144760636.84536261428504175.7104617500514

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YJL103C#MA0427.1-10.0001846120.08787540.17533511CCCTCTGGAGCCTCTCCGGAGCT-
CTCF#MA0139.150.0007015340.333930.22008312CCCTCTGGAGCCTAGCGCCCCCTGGTGGCCA-
REI1#MA0364.1-10.0009269110.441210.2200837CCCTCTGGAGCCCCCCTGA+
EBF1#MA0154.1-10.001204290.5732430.22875510CCCTCTGGAGCCTCCCTTGGGT-
USV1#MA0413.150.002022920.9629110.32021112CCCTCTGGAGCCAAATTCCCCCTGAATTTGTG+
SOK2#MA0385.1-10.003256711.550190.44186511CCCTCTGGAGCCTGCCTGCAGGT-
YGR067C#MA0425.120.005773472.748170.68541812CCCTCTGGAGCCACCCCACTTTTTTG+
PLAG1#MA0163.100.006539533.112820.69010112CCCTCTGGAGCCCCCCCTTGGGCCCC-
Tal1::Gata1#MA0140.1-40.007583833.60990.693518CCCTCTGGAGCCCTGGTGGGGACAGATAAG+
RME1#MA0370.110.008032243.823340.693519CCCTCTGGAGCCTTCCTTTGGA-
PHD1#MA0355.1-20.010294.898020.79872810CCCTCTGGAGCCACCTGCAGCA+
RUNX1#MA0002.2-20.01093295.204040.79872810CCCTCTGGAGCCGTCTGTGGTTT+
SIP4#MA0380.1-20.01216195.789050.8250527CCCTCTGGAGCCCTCCGGA+
ELK1#MA0028.1-10.01308486.228390.82848810CCCTCTGGAGCCCTTCCGGCTC-
sna#MA0086.1-10.01728498.227590.8301436CCCTCTGGAGCCCACCTG-
GSM1#MA0308.120.01783068.487350.83014312CCCTCTGGAGCCTATACTCCGGAGTTTTTTAAT-
Pax5#MA0014.170.01953559.298870.83014312CCCTCTGGAGCCCCGCTACGCTTCAGTGCTCT-
Hand1::Tcfe2a#MA0092.1-10.01958219.321060.83014310CCCTCTGGAGCCGGTCTGGCAT+
MET28#MA0332.1-40.01960379.331350.8301436CCCTCTGGAGCCCTGTGG+
RGM1#MA0366.1-10.02011099.572770.8301435CCCTCTGGAGCCCCCCT-
GIS1#MA0306.100.02097769.985330.8301439CCCTCTGGAGCCACCCCTAAA+
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