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MacroAPE 1083:NFAC2 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;22.03490921714918;4.8456159396055325;12.489931954434981;46.595304523428695!2;0.0;0.0;85.9657616346184;0.0!3;0.0;0.0;85.9657616346184;0.0!4;8...")
 
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-107G3;0.328757!10429-106D6;0.0404691!10464-106H5;0.148752!10827-111C8;0.00873551!10789-110H6;0.345716!10828-111C9;0.746465!10788-110H5;0.568161!10792-110H9;0.0945149!10765-110E9;0.266687!10829-111D1;0.204094!10830-111D2;0.0433456!10831-111D3;0.29469!10832-111D4;0.721798!10833-111D5;0.214354!10764-110E8;0.143342!10770-110F5;0.154677!10399-106A3;0.26658!10400-106A4;0.179886!10405-106A9;0.256138!10834-111D6;0.223534!10835-111D7;0.169549!10836-111D8;0.0711994!10837-111D9;0.0122088!10699-109G6;0.293695!10802-111A1;0.364171!10796-110I4;0.0519294!10010-101C1;0.504053!10810-111A9;0.0470587!10421-106C7;0.0793109!10708-109H6;0.201051!12235-129G3;0.459926!12236-129G4;0.617723!12237-129G5;0.965466!10167-103B5;0.793128!10151-102I7;0.13336!10428-106D5;0.461674!10795-110I3;0.24568!10805-111A4;0.050305!10052-101G7;0.0543222!10189-103D9;0.00866709!10589-108D4;0.0484506!10425-106D2;0.00341779!10427-106D4;0.268623!10702-109G9;0.942067!10432-106D9;0.109524!10496-107C1;0.997776!10718-109I7;0.656291!10011-101C2;0.157404!10053-101G8;0.00546359!10686-109F2;0.553125!10084-102B3;0.113354!10012-101C3;0.2081!10085-102B4;0.306094!10482-107A5;0.062735!10419-106C5;0.827101!10080-102A8;0.173024!10760-110E4;0.00429331!10709-109H7;0.0318801!10710-109H8;0.0552507!10703-109H1;0.286948!10719-109I8;0.0920106!10642-109A3;0.202319!10177-103C6;0.249964!10164-103B2;0.718057!10173-103C2;0.37279!10166-103B4;0.28104!10083-102B2;0.425233!10188-103D8;0.131426!10552-107I3;0.82785!10553-107I4;0.467839!10013-101C4;0.825388!10536-107G5;0.000958149!10618-108G6;0.816892!10423-106C9;0.0530734!10785-110H2;0.334788!12238-129G6;0.136781!12239-129G7;0.0135273!12240-129G8;0.00667838!10416-106C2;0.0584442!10801-110I9;0.132956!10766-110F1;0.810556!10824-111C5;0.238156!10825-111C6;0.0486768!10826-111C7;0.0321219!10454-106G4;0.040712!10409-106B4;0.0700889!10638-108I8;0.317057!10636-108I6;0.674493!10513-107D9;0.571645!10420-106C6;0.196488!10082-102B1;0.104572!10014-101C5;0.0677925!10070-101I7;0.173567!10452-106G2;0.111103!10453-106G3;0.467797!10449-106F8;0.826606!10042-101F6;0.717249!10069-101I6;0.741143!10193-103E4;0.0189071!10631-108I1;0.350696!10438-106E6;0.101837!10488-107B2;0.382742!10196-103E7;0.0984935!10071-101I8;0.0726818!10071-101I8;0.0399354!10041-101F5;0.102811!10451-106G1;0.0843377!10450-106F9;0.678933!10604-108F1;0.178359!10605-108F2;0.842063!10606-108F3;0.778762!10603-108E9;0.940493!10497-107C2;0.773813!10448-106F7;0.487683!10643-109A4;0.685931!10426-106D3;0.0285567!10431-106D8;0.874891!10197-103E8;0.49355!10443-106F2;0.0664319!10815-111B5;0.182875!10816-111B6;0.106562!10817-111B7;0.0841054!10015-101C6;0.0838006!10410-106B5;0.054993!10054-101G9;0.308632!10758-110E2;0.68087!10711-109H9;0.306263!10040-101F4;0.507343!10470-106I2;0.234218!10415-106C1;0.260523!10198-103E9;0.678041!10614-108G2;0.0205961!10612-108F9;0.268525!10549-107H9;0.145239!10615-108G3;0.0916205!10487-107B1;0.111592!10433-106E1;0.342906!10688-109F4;0.80409!10444-106F3;0.924871!10444-106F3;0.70153!10485-107A8;0.815479!10413-106B8;0.598841!10175-103C4;0.246746!10161-103A8;0.626743!12131-128D7;0.99297!10624-108H3;0.638506!10712-109I1;0.908331!10205-103F7;0.513331!10206-103F8;0.0079079!10207-103F9;0.035868!10050-101G5;0.000326261!10051-101G6;0.422933!10016-101C7;0.206436!10046-101G1;0.0962782!10778-110G4;0.0295645!10633-108I3;0.012022!10818-111B8;0.0764449!10819-111B9;0.350552!10820-111C1;0.410258!10484-107A7;0.415931!10808-111A7;0.43045!10169-103B7;0.175867!10153-102I9;0.417209!13425-144D5;0.579279!13433-144E4;0.0700197!13437-144E8;0.0583206!11904-125F5;0.0414991!11905-125F6;0.614828!10039-101F3;0.271242!10791-110H8;0.224839!10017-101C8;0.210404!10045-101F9;0.133215!10509-107D5;0.058329!10839-111E2;0.281186!10692-109F8;0.354167!10079-102A7;0.927919!10078-102A6;0.153172!10721-110A1;0.112105!10569-108B2;0.233721!10570-108B3;0.424996!10571-108B4;0.489853!10647-109A8;0.293132!10752-110D5;0.540255!10782-110G8;0.189432!10726-110A6;0.319487!10018-101C9;0.324516!10086-102B5;0.789642!10182-103D2;0.359643!10165-103B3;0.611158!10499-107C4;0.724435!10408-106B3;0.280268!10019-101D1;0.651915!10068-101I5;0.123835!10075-102A3;0.0228733!10077-102A5;0.320276!10727-110A7;0.434155!10775-110G1;0.179661!10412-106B7;0.844591!12231-129F8;0.849025!12232-129F9;0.00607983!12233-129G1;0.00633436!12234-129G2;0.00330032!10414-106B9;0.0185782!10170-103B8;0.0605919!10183-103D3;0.22481!10150-102I6;0.226773!10174-103C3;0.492567!10155-103A2;0.914702!10038-101F2;0.93895!10838-111E1;0.695852!10759-110E3;0.341894!10514-107E1;0.60778!10465-106H6;0.584912!10691-109F7;0.115794!10843-111E6;0.192375!10844-111E7;0.153214!11747-123G1;0.156832!11748-123G2;0.00554101!11749-123G3;0.00482612!11750-123G4;0.0103004!11751-123G5;0.00370438!11840-124H4;0.0251029!11752-123G6;0.0361732!11753-123G7;0.0646287!11754-123G8;0.00354824!11755-123G9;0.000287476!11756-123H1;0.00351691!11833-124G6;0.00640961!11760-123H5;0.0419223!11836-124G9;0.0110247!11758-123H3;0.0146576!11835-124G8;0.10744!11762-123H7;0.0125915!11838-124H2;0.0628332!11757-123H2;0.606188!11759-123H4;0.0356257!11761-123H6;0.00187153!11842-124H6;0.0466566!11837-124H1;0.071211!10568-108B1;0.0229601!13230-141I8;0.236585!13231-141I9;0.0537934!10696-109G3;0.0600082!10493-107B7;0.276618!10494-107B8;0.426673!10850-111F4;0.382704!10851-111F5;0.386836!10852-111F6;0.622609!10853-111F7;0.278849!10854-111F8;0.470096!10855-111F9;0.0413541!10856-111G1;0.196961!10847-111F1;0.302489!10846-111E9;0.517509!10848-111F2;0.291658!10845-111E8;0.660463!10857-111G2;0.113108!10858-111G3;0.273833!10156-103A3;0.67099!11901-125F2;0.54303!11902-125F3;0.511529!11903-125F4;0.384689!10689-109F5;0.331403!10648-109A9;0.501302!10784-110H1;0.966855!10744-110C6;0.231592!10772-110F7;0.91813!10474-106I6;0.210358!10600-108E6;0.159768!10684-109E9;0.686387!12226-129F3;0.0334242!12227-129F4;0.0155016!10508-107D4;0.946258!10539-107G8;0.0835749!10607-108F4;0.43512!10555-107I6;0.0820212!10774-110F9;0.376581!10637-108I7;0.110669!10663-109C6;0.593619!10728-110A8;0.232037!10729-110A9;0.378134!10430-106D7;0.0216963!10730-110B1;0.278085!10813-111B3;0.00844292!10812-111B2;0.00420677!10037-101F1;0.517966!10172-103C1;0.311048!10163-103B1;0.251944!10076-102A4;0.632325!10073-102A1;0.142805!10036-101E9;0.132136!10195-103E6;0.179051!10277-104E7;0.262893!10434-106E2;0.886447!10550-107I1;0.152168!10545-107H5;0.19385!10544-107H4;0.643758!10704-109H2;0.899995!10510-107D6;0.0482447!10558-107I9;0.929439!10020-101D2;0.135159!10732-110B3;0.000411008!10049-101G4;0.470865!10698-109G5;0.220583!10437-106E5;0.204688!10417-106C3;0.677728!10035-101E8;0.724208!10171-103B9;0.261199!10157-103A4;0.333085!10034-101E7;0.432545!10072-101I9;0.263036!10199-103F1;0.189803!10200-103F2;0.294023!10697-109G4;0.0469461!10723-110A3;0.972186!10179-103C8;0.750582!10160-103A7;0.160043!10180-103C9;0.346771!10162-103A9;0.105986!10021-101D3;0.636961!10840-111E3;0.00700016!10706-109H4;0.571081!10033-101E6;0.290008!10032-101E5;0.407956!10490-107B4;0.184354!10439-106E7;0.209944!10022-101D4;0.539063!10176-103C5;0.00790492!10469-106I1;0.281835!10067-101I4;0.158341!10411-106B6;0.11369!10471-106I3;0.718112!10030-101E3;0.374641!10475-106I7;0.585511!10787-110H4;0.052433!10477-106I9;0.453273!10695-109G2;0.323122!11771-123I7;0.00201706!11772-123I8;0.974685!11773-123I9;0.954903!10093-102C3;0.611045!10442-106F1;0.386733!10442-106F1;0.995525!10201-103F3;0.659991!10639-108I9;0.0789183!11843-124H7;0.510237!11841-124H5;0.710957!10693-109F9;0.0141799!10436-106E4;0.921661!10483-107A6;0.080755!10282-104F3;0.134866!10023-101D5;0.64357!10066-101I3;0.0634928!10065-101I2;0.152088!10800-110I8;0.0237704!10610-108F7;0.0477043!10841-111E4;0.0615061!10541-107H1;0.148502!10842-111E5;0.0774205!10562-108A4;0.0427017!10024-101D6;0.0488399!10064-101I1;0.651224!10609-108F6;0.623647!10048-101G3;0.0938525!10781-110G7;0.00298359!10181-103D1;0.00707155!10159-103A6;0.731596!10056-101H2;0.872156!10737-110B8;0.759482!10025-101D7;0.0479817!10044-101F8;0.426368!10424-106D1;0.209991!10463-106H4;0.500951!10616-108G4;0.438307!10486-107A9;0.380355!10062-101H8;0.625886!10202-103F4;0.110693!10158-103A5;0.339501!10441-106E9;0.681951!10031-101E4;0.327138!10063-101H9;0.198653!10063-101H9;0.107818!11763-123H8;0.185432!11765-123I1;0.0113837!11768-123I4;0.00179834!10807-111A6;0.0452062!10790-110H7;0.0817163!10798-110I6;0.0977892!10786-110H3;0.903474!10591-108D6;0.00649462!10593-108D8;0.0200243!10590-108D5;0.0915775!10026-101D8;0.0245413!10096-102C6;0.472364!10168-103B6;0.239819!10154-103A1;0.507409!10209-103G2;0.860429!10061-101H7;0.117356!10027-101D9;0.0843201!10043-101F7;0.875039!10783-110G9;0.564154!10028-101E1;0.0541228!10060-101H6;0.107495!10203-103F5;0.00763423!10059-101H5;0.0459072!10047-101G2;0.104286!10029-101E2;0.166059!10058-101H4;0.0388418!10418-106C4;0.112992!10492-107B6;0.933546!10694-109G1;0.808069!10797-110I5;0.0213387!10057-101H3;0.0485424!10100-102D1;0.0176467!10055-101H1;5.40402e-05!10204-103F6;0.00431715!10191-103E2;0.00173112!10563-108A5;0.108059
|name=NFAC2_f1
|name=NFAC2_f1
|tomtom_result=NFATC2#MA0152.1;0;3.2121e-07;0.000152896;0.000305069;7;TGGAAAATT;TGGAAAA;-!EDS1#MA0294.1;0;0.000193631;0.0921683;0.0919503;9;TGGAAAATT;CGGAAAAAT;+!SFP1#MA0378.1;3;0.000866668;0.412534;0.274372;9;TGGAAAATT;CCGTAGAAAATTTTTTTCAAT;-!dl_1#MA0022.1;0;0.00249114;1.18578;0.473531;9;TGGAAAATT;CGGAAAAACCCC;-!RGT1#MA0367.1;1;0.00253493;1.20663;0.473531;9;TGGAAAATT;CCGGAAAAACT;-!STB3#MA0390.1;6;0.00299151;1.42396;0.473531;9;TGGAAAATT;CCAGAGTGAAAAATTTTGGAC;-!HMG-I/Y#MA0045.1;7;0.00453204;2.15725;0.561642;9;TGGAAAATT;CAACAAATGGAAAAAC;+!HSF1#MA0319.1;1;0.00557576;2.65406;0.561642;7;TGGAAAATT;ATGGAACA;+!YPR196W#MA0437.1;0;0.00591358;2.81487;0.561642;9;TGGAAAATT;CGGAGAAAT;-!STAT1#MA0137.2;-1;0.00777859;3.70261;0.67161;8;TGGAAAATT;GGAAAACGAAACTG;+!STAT1#MA0137.2;7;0.00970725;4.62065;0.717277;8;TGGAAAATT;GGTTTCCGGGAAATG;-!ETS1#MA0098.1;0;0.00981797;4.67336;0.717277;6;TGGAAAATT;CGGAAA;-!REL#MA0101.1;-1;0.011593;5.51828;0.759053;8;TGGAAAATT;GGAAATCCCC;-!squamosa#MA0082.1;7;0.0126676;6.02978;0.759053;7;TGGAAAATT;CCAAAAATGGAAAT;+!ttk#MA0460.1;1;0.0151002;7.18771;0.759053;8;TGGAAAATT;AAGGATAAT;+!RELA#MA0107.1;-1;0.01522;7.24472;0.759053;8;TGGAAAATT;GGAAATTCCC;-!ELF5#MA0136.1;1;0.0157743;7.50855;0.759053;8;TGGAAAATT;AAGGAAGTA;-!dl_2#MA0023.1;-1;0.0166207;7.91143;0.759053;8;TGGAAAATT;GGAAAACCCC;-!znf143#MA0088.1;11;0.0167835;7.98895;0.759053;9;TGGAAAATT;GCAAGGCATGATGGGAAATC;-!id1#MA0120.1;5;0.01975;9.401;0.852615;7;TGGAAAATT;CGAAAAGGAAAA;-
}}
}}

Latest revision as of 12:30, 7 September 2012

Full Name: NFAC2_f1

Motif matrix
POACGT
122.034909217149184.845615939605532512.48993195443498146.595304523428695
20.00.085.96576163461840.0
30.00.085.96576163461840.0
485.96576163461840.00.00.0
583.595853402147570.02.3699082324708260.0
681.837717474694731.43887285542871762.6891713044949910.0
768.39931954434994.9937352041349655.2476539433282617.3250529428053
825.5493164240223711.4530971027298.49071181214047140.4726362957265
913.74209505153381820.2132936048979314.71172092237641837.29865205581024

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFATC2#MA0152.103.2121e-070.0001528960.0003050697TGGAAAATTTGGAAAA-
EDS1#MA0294.100.0001936310.09216830.09195039TGGAAAATTCGGAAAAAT+
SFP1#MA0378.130.0008666680.4125340.2743729TGGAAAATTCCGTAGAAAATTTTTTTCAAT-
dl_1#MA0022.100.002491141.185780.4735319TGGAAAATTCGGAAAAACCCC-
RGT1#MA0367.110.002534931.206630.4735319TGGAAAATTCCGGAAAAACT-
STB3#MA0390.160.002991511.423960.4735319TGGAAAATTCCAGAGTGAAAAATTTTGGAC-
HMG-I/Y#MA0045.170.004532042.157250.5616429TGGAAAATTCAACAAATGGAAAAAC+
HSF1#MA0319.110.005575762.654060.5616427TGGAAAATTATGGAACA+
YPR196W#MA0437.100.005913582.814870.5616429TGGAAAATTCGGAGAAAT-
STAT1#MA0137.2-10.007778593.702610.671618TGGAAAATTGGAAAACGAAACTG+
STAT1#MA0137.270.009707254.620650.7172778TGGAAAATTGGTTTCCGGGAAATG-
ETS1#MA0098.100.009817974.673360.7172776TGGAAAATTCGGAAA-
REL#MA0101.1-10.0115935.518280.7590538TGGAAAATTGGAAATCCCC-
squamosa#MA0082.170.01266766.029780.7590537TGGAAAATTCCAAAAATGGAAAT+
ttk#MA0460.110.01510027.187710.7590538TGGAAAATTAAGGATAAT+
RELA#MA0107.1-10.015227.244720.7590538TGGAAAATTGGAAATTCCC-
ELF5#MA0136.110.01577437.508550.7590538TGGAAAATTAAGGAAGTA-
dl_2#MA0023.1-10.01662077.911430.7590538TGGAAAATTGGAAAACCCC-
znf143#MA0088.1110.01678357.988950.7590539TGGAAAATTGCAAGGCATGATGGGAAATC-
id1#MA0120.150.019759.4010.8526157TGGAAAATTCGAAAAGGAAAA-
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