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MacroAPE 1083:Motif515: Difference between revisions

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!10827-111C8;0.0100724!10789-110H6;0.100543!10828-111C9;0.235036!10788-110H5;0.204376!10792-110H9;0.101173!10765-110E9;0.185022!10829-111D1;0.100076!10830-111D2;0.0867972!10831-111D3;0.131107!10832-111D4;0.103067!10833-111D5;0.115521!10764-110E8;0.137331!10770-110F5;0.164594!10399-106A3;0.0961496!10400-106A4;0.122295!10405-106A9;0.107703!10834-111D6;0.121266!10835-111D7;0.0928437!10836-111D8;0.0877446!10837-111D9;0.142601!10699-109G6;0.100106!10802-111A1;0.201316!10796-110I4;0.117291!10010-101C1;0.17777!10810-111A9;0.0277491!10421-106C7;0.0126511!10708-109H6;0.222042!12235-129G3;0.0300193!12236-129G4;0.0604285!12237-129G5;0.236044!10167-103B5;0.109039!10151-102I7;0.647819!10428-106D5;0.476208!10795-110I3;0.95055!10805-111A4;0.053114!10052-101G7;0.0247112!10189-103D9;0.060314!10589-108D4;0.0347403!10425-106D2;0.0130484!10427-106D4;0.347115!10702-109G9;0.12205!10432-106D9;0.097591!10496-107C1;0.563505!10718-109I7;0.0375579!10011-101C2;0.0757734!10053-101G8;0.0527211!10686-109F2;0.658333!10084-102B3;0.161046!10012-101C3;0.487013!10085-102B4;0.479023!10482-107A5;0.779285!10419-106C5;0.580477!10080-102A8;0.442885!10760-110E4;0.0539093!10709-109H7;0.463649!10710-109H8;0.875799!10703-109H1;0.0181736!10719-109I8;0.0574173!10642-109A3;0.0657766!10177-103C6;0.335601!10164-103B2;0.592749!10173-103C2;0.516758!10166-103B4;0.982762!10083-102B2;0.654076!10188-103D8;0.936467!10552-107I3;0.447035!10553-107I4;0.0106958!10013-101C4;0.342946!10536-107G5;0.0608056!10618-108G6;0.154641!10423-106C9;0.596677!10785-110H2;0.459224!12238-129G6;0.76629!12239-129G7;0.0390045!12240-129G8;0.0389404!10416-106C2;0.368969!10801-110I9;0.0706116!10766-110F1;0.128932!10824-111C5;0.13074!10825-111C6;0.0628831!10826-111C7;0.0677074!10454-106G4;0.0823233!10409-106B4;0.0791377!10638-108I8;0.149091!10636-108I6;0.0175337!10513-107D9;0.833765!10420-106C6;0.960153!10082-102B1;0.0752279!10014-101C5;0.0669264!10070-101I7;0.0532721!10452-106G2;0.0622878!10453-106G3;0.102617!10449-106F8;0.0621307!10042-101F6;0.0529653!10069-101I6;0.374284!10193-103E4;0.0597347!10631-108I1;0.613753!10438-106E6;0.118352!10488-107B2;0.677261!10196-103E7;0.0325175!10071-101I8;0.0788627!10071-101I8;0.0985411!10041-101F5;0.91291!10451-106G1;0.143777!10450-106F9;0.0352792!10604-108F1;0.019562!10605-108F2;0.671988!10606-108F3;0.0172766!10603-108E9;0.590009!10497-107C2;0.347513!10448-106F7;0.0884388!10643-109A4;0.0010121!10426-106D3;0.835441!10431-106D8;0.308329!10197-103E8;0.444723!10443-106F2;0.00641063!10815-111B5;0.0571027!10816-111B6;0.00475316!10817-111B7;0.0077238!10015-101C6;0.00511157!10410-106B5;0.0757555!10054-101G9;0.035979!10758-110E2;0.235197!10711-109H9;0.0834057!10040-101F4;0.0484658!10470-106I2;0.578435!10415-106C1;0.430343!10198-103E9;0.604853!10614-108G2;0.0622058!10612-108F9;0.738609!10549-107H9;0.01014!10615-108G3;0.00345222!10487-107B1;0.135154!10433-106E1;0.0120228!10688-109F4;0.368621!10444-106F3;0.566388!10444-106F3;0.946561!10485-107A8;0.952687!10413-106B8;0.829717!10175-103C4;0.47035!10161-103A8;0.393091!12131-128D7;0.342915!10624-108H3;0.519848!10712-109I1;0.327385!10205-103F7;0.0436726!10206-103F8;0.0592801!10207-103F9;0.0495975!10050-101G5;0.0380916!10051-101G6;0.034188!10016-101C7;0.0345811!10046-101G1;0.039067!10778-110G4;0.0866826!10633-108I3;0.0295572!10818-111B8;0.484367!10819-111B9;0.0828057!10820-111C1;0.0692135!10484-107A7;0.0725121!10808-111A7;0.0241758!10169-103B7;0.0658514!10153-102I9;0.625154!13425-144D5;0.428894!13433-144E4;0.598685!13437-144E8;0.724017!11904-125F5;0.251346!11905-125F6;0.713721!10039-101F3;0.119739!10791-110H8;0.517141!10017-101C8;0.984988!10045-101F9;0.0332357!10509-107D5;0.115152!10839-111E2;0.0388963!10692-109F8;0.0158402!10079-102A7;0.353321!10078-102A6;0.0314815!10721-110A1;0.0146737!10569-108B2;0.0310938!10570-108B3;0.76659!10571-108B4;0.508153!10647-109A8;0.709438!10752-110D5;0.54108!10782-110G8;0.111782!10726-110A6;0.817728!10018-101C9;0.812917!10086-102B5;0.485036!10182-103D2;0.561268!10165-103B3;0.339636!10499-107C4;0.322965!10408-106B3;0.295314!10019-101D1;0.383737!10068-101I5;0.076047!10075-102A3;0.107907!10077-102A5;0.104154!10727-110A7;0.457059!10775-110G1;0.127742!10412-106B7;0.0923797!12231-129F8;0.914148!12232-129F9;0.0398204!12233-129G1;0.0153611!12234-129G2;0.0286243!10414-106B9;0.0247737!10170-103B8;0.149277!10183-103D3;0.702845!10150-102I6;0.682329!10174-103C3;0.419236!10155-103A2;0.242366!10038-101F2;0.254765!10838-111E1;0.311262!10759-110E3;0.273261!10514-107E1;0.505282!10465-106H6;0.0400459!10691-109F7;0.000801292!10843-111E6;0.834135!10844-111E7;0.101934!11747-123G1;0.0747526!11748-123G2;0.786127!11749-123G3;0.331279!11750-123G4;0.925543!11751-123G5;0.229326!11840-124H4;0.0788534!11752-123G6;0.0831762!11753-123G7;0.207522!11754-123G8;0.135738!11755-123G9;0.809855!11756-123H1;0.530646!11833-124G6;0.17621!11760-123H5;0.474894!11836-124G9;0.197293!11758-123H3;0.114894!11835-124G8;0.190655!11762-123H7;0.0682217!11838-124H2;0.116234!11757-123H2;0.0679797!11759-123H4;0.488636!11761-123H6;0.481817!11842-124H6;0.0817659!11837-124H1;0.14412!10568-108B1;0.0858577!13230-141I8;0.319433!13231-141I9;0.6746!10696-109G3;0.466102!10493-107B7;0.24517!10494-107B8;0.657067!10850-111F4;0.163066!10851-111F5;0.0171933!10852-111F6;0.957445!10853-111F7;0.296143!10854-111F8;0.0467011!10855-111F9;0.0937309!10856-111G1;0.187882!10847-111F1;0.456227!10846-111E9;0.383568!10848-111F2;0.581543!10845-111E8;0.76681!10857-111G2;0.058788!10858-111G3;0.037057!10156-103A3;0.158037!11901-125F2;0.438116!11902-125F3;0.78428!11903-125F4;0.626907!10689-109F5;0.443673!10648-109A9;0.0229633!10784-110H1;0.00802634!10744-110C6;0.486357!10772-110F7;0.0708569!10474-106I6;0.0567039!10600-108E6;0.119086!10684-109E9;0.795199!12226-129F3;0.956553!12227-129F4;0.584734!10508-107D4;0.146631!10539-107G8;0.100754!10607-108F4;0.127591!10555-107I6;0.0699026!10774-110F9;0.0589584!10637-108I7;0.0695538!10663-109C6;0.0999153!10728-110A8;0.089436!10729-110A9;0.307435!10430-106D7;0.0606615!10730-110B1;0.269865!10813-111B3;0.0212082!10812-111B2;0.214198!10037-101F1;0.110769!10172-103C1;0.497698!10163-103B1;0.796774!10076-102A4;0.363517!10073-102A1;0.570963!10036-101E9;0.983648!10195-103E6;0.470531!10277-104E7;0.526594!10434-106E2;0.449665!10550-107I1;0.431014!10545-107H5;0.167267!10544-107H4;0.661407!10704-109H2;0.619878!10510-107D6;0.260847!10558-107I9;0.450925!10020-101D2;0.430362!10732-110B3;0.0717773!10049-101G4;0.40205!10698-109G5;0.138268!10437-106E5;0.699973!10417-106C3;0.0342639!10035-101E8;0.204874!10171-103B9;0.491147!10157-103A4;0.661328!10034-101E7;0.439422!10072-101I9;0.471249!10199-103F1;0.964966!10200-103F2;0.0500429!10697-109G4;0.0544618!10723-110A3;0.0357854!10179-103C8;0.486259!10160-103A7;0.729407!10180-103C9;0.756239!10162-103A9;0.826464!10021-101D3;0.627207!10840-111E3;0.0253267!10706-109H4;0.0849218!10033-101E6;0.31034!10032-101E5;0.387862!10490-107B4;0.526517!10439-106E7;0.272542!10022-101D4;0.555462!10176-103C5;0.0749748!10469-106I1;0.61984!10067-101I4;0.585317!10411-106B6;0.249976!10471-106I3;0.2829!10030-101E3;0.0597933!10475-106I7;0.188517!10787-110H4;0.0320957!10477-106I9;0.0213201!10695-109G2;0.0623646!11771-123I7;0.128134!11772-123I8;0.381708!11773-123I9;0.231984!10093-102C3;0.157091!10442-106F1;0.061576!10442-106F1;0.0961811!10201-103F3;0.093595!10639-108I9;0.0584087!11843-124H7;0.381697!11841-124H5;0.490085!10693-109F9;0.0329198!10436-106E4;0.617024!10483-107A6;0.147699!10282-104F3;0.808899!10023-101D5;0.655459!10066-101I3;0.0768616!10065-101I2;0.475716!10800-110I8;0.0508427!10610-108F7;0.455753!10841-111E4;0.136145!10541-107H1;0.022049!10842-111E5;0.158512!10562-108A4;0.0839224!10024-101D6;0.125809!10064-101I1;0.099887!10609-108F6;0.164753!10048-101G3;0.0425771!10781-110G7;0.0760305!10181-103D1;0.188475!10159-103A6;0.36689!10056-101H2;0.298239!10737-110B8;0.394605!10025-101D7;0.0688619!10044-101F8;0.0997051!10424-106D1;0.0452861!10463-106H4;0.183032!10616-108G4;0.999407!10486-107A9;0.910737!10062-101H8;0.014552!10202-103F4;0.0855763!10158-103A5;0.0733577!10441-106E9;0.218557!10031-101E4;0.0776486!10063-101H9;0.501729!10063-101H9;0.844479!11763-123H8;0.0985598!11765-123I1;0.199678!11768-123I4;0.0484763!10807-111A6;0.0596648!10790-110H7;0.203779!10798-110I6;0.0173368!10786-110H3;0.918838!10591-108D6;0.988318!10593-108D8;0.251271!10590-108D5;0.931403!10026-101D8;0.00575444!10096-102C6;0.152137!10168-103B6;0.22523!10154-103A1;0.475802!10209-103G2;0.418067!10061-101H7;0.0517637!10027-101D9;0.131805!10043-101F7;0.142115!10783-110G9;0.200892!10028-101E1;0.520263!10060-101H6;0.00336854!10203-103F5;0.0249208!10059-101H5;0.0646874!10047-101G2;0.0547675!10029-101E2;0.0707295!10058-101H4;0.0540298!10418-106C4;0.0897074!10492-107B6;0.89973!10694-109G1;0.0787309!10797-110I5;0.0953983!10057-101H3;0.473669!10100-102D1;0.0919752!10055-101H1;0.0941109!10204-103F6;0.121827!10191-103E2;0.0527409!10563-108A5;0.0397023
|name=motif515
|name=motif515
|tomtom_result=SP1#MA0079.2;2;0.000467077;0.222329;0.444658;7;CCTCCCA;CCCCGCCCCC;+!Klf4#MA0039.2;3;0.00293904;1.39898;0.932656;7;CCTCCCA;GCCCCACCCA;-!btd#MA0443.1;1;0.00293904;1.39898;0.932656;7;CCTCCCA;TCCGCCCCCT;-!Egr1#MA0162.1;0;0.00397736;1.89322;0.946612;7;CCTCCCA;CCGCCCACGCA;-!Macho-1#MA0118.1;2;0.00857937;4.08378;1;7;CCTCCCA;GAACCCCCA;-!znf143#MA0088.1;2;0.00952276;4.53283;1;7;CCTCCCA;GATTTCCCATAATGCCTTGC;+!SP1#MA0079.2;3;0.0112604;5.35997;1;7;CCTCCCA;ACCCCGCCCC;-!SPI1#MA0080.1;0;0.0127979;6.09179;1;6;CCTCCCA;CTTCCG;-!RXR::RAR_DR5#MA0159.1;3;0.0176715;8.41163;1;7;CCTCCCA;TGACCTCTCCGTGACCT;-!GCR2#MA0305.1;0;0.0179648;8.55124;1;7;CCTCCCA;GCTTCCT;+!RREB1#MA0073.1;7;0.0188213;8.95896;1;7;CCTCCCA;CCCCAAACCACCCCCCCCCC;+
}}
}}

Latest revision as of 12:27, 7 September 2012

Full Name: motif515

Motif matrix
POACGT
01315512568740755713
02013863000
031694204527117161
04013863000
05013863000
06013863000
076433547359867918257

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.220.0004670770.2223290.4446587CCTCCCACCCCGCCCCC+
Klf4#MA0039.230.002939041.398980.9326567CCTCCCAGCCCCACCCA-
btd#MA0443.110.002939041.398980.9326567CCTCCCATCCGCCCCCT-
Egr1#MA0162.100.003977361.893220.9466127CCTCCCACCGCCCACGCA-
Macho-1#MA0118.120.008579374.0837817CCTCCCAGAACCCCCA-
znf143#MA0088.120.009522764.5328317CCTCCCAGATTTCCCATAATGCCTTGC+
SP1#MA0079.230.01126045.3599717CCTCCCAACCCCGCCCC-
SPI1#MA0080.100.01279796.0917916CCTCCCACTTCCG-
RXR::RAR_DR5#MA0159.130.01767158.4116317CCTCCCATGACCTCTCCGTGACCT-
GCR2#MA0305.100.01796488.5512417CCTCCCAGCTTCCT+
RREB1#MA0073.170.01882138.9589617CCTCCCACCCCAAACCACCCCCCCCCC+
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