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MacroAPE 1083:Motif443: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;17739;24389;17035;11755!02;0;70918;0;0!03;70918;0;0;0!04;0;0;70918;0!05;0;0;70918;0!06;70918;0;0;0!07;70918;0;0;0 |macroape_1083_sample_pv...")
 
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50377!11532-120A2;0.0905876!11693-123A1;0.164773!11292-117A5;0.114781!11369-118A1;0.588349!11441-118I1;0.0248411!10007-101B4;0.860473!11520-119H8;0.141424!11600-120H7;0.303154!11681-122H7;0.161861!11216-116B1;0.641247!12179-129A1;0.780952!12180-129A2;0.000217146!12181-129A3;0.000275788!12176-128I7;0.000313322!12177-128I8;0.000401237!12182-129A4;0.000346505!12183-129A5;0.000353853!12184-129A6;0.000247599!10809-111A8;0.000304158!10597-108E3;0.0005091!10717-109I6;0.00289061!10455-106G5;0.0364558!10534-107G3;0.875028!10429-106D6;0.218594!10464-106H5;0.930455!10827-111C8;0.635483!10789-110H6;0.0169446!10828-111C9;0.00565737!10788-110H5;0.000810399!10792-110H9;0.682619!10765-110E9;0.0150957!10829-111D1;0.0895821!10830-111D2;0.262076!10831-111D3;0.0046148!10832-111D4;0.00404837!10833-111D5;0.254142!10764-110E8;0.265429!10770-110F5;0.135526!10399-106A3;0.0197109!10400-106A4;0.243789!10405-106A9;0.287583!10834-111D6;0.300447!10835-111D7;0.0986465!10836-111D8;0.19443!10837-111D9;0.302097!10699-109G6;0.0977772!10802-111A1;0.00565959!10796-110I4;0.0829587!10010-101C1;0.0171027!10810-111A9;0.0463803!10421-106C7;0.000981849!10708-109H6;0.0211358!12235-129G3;0.00789173!12236-129G4;0.150719!12237-129G5;0.0283936!10167-103B5;0.213104!10151-102I7;0.0132631!10428-106D5;0.060214!10795-110I3;0.938107!10805-111A4;0.86086!10052-101G7;0.000369261!10189-103D9;0.0366735!10589-108D4;0.00289653!10425-106D2;0.00106707!10427-106D4;0.0014957!10702-109G9;0.0225988!10432-106D9;0.0308499!10496-107C1;0.753212!10718-109I7;0.287085!10011-101C2;0.0539169!10053-101G8;0.103834!10686-109F2;0.00020093!10084-102B3;0.364764!10012-101C3;0.0241773!10085-102B4;0.0342642!10482-107A5;0.00233561!10419-106C5;0.0239101!10080-102A8;0.0301688!10760-110E4;0.0230964!10709-109H7;0.092493!10710-109H8;0.0900889!10703-109H1;0.012558!10719-109I8;0.000156831!10642-109A3;0.000484757!10177-103C6;0.000101147!10164-103B2;0.0223497!10173-103C2;0.0374989!10166-103B4;0.00226918!10083-102B2;0.00751971!10188-103D8;0.00379299!10552-107I3;0.0149818!10553-107I4;0.0166021!10013-101C4;0.00612551!10536-107G5;0.120832!10618-108G6;0.00544295!10423-106C9;0.0298934!10785-110H2;0.0516022!12238-129G6;0.0148251!12239-129G7;0.163117!12240-129G8;0.272492!10416-106C2;0.0076619!10801-110I9;0.118481!10766-110F1;0.0153687!10824-111C5;0.0304322!10825-111C6;0.0240257!10826-111C7;0.0356803!10454-106G4;0.0466542!10409-106B4;0.00284003!10638-108I8;0.0307392!10636-108I6;0.248044!10513-107D9;0.0537708!10420-106C6;0.00177423!10082-102B1;0.000659853!10014-101C5;0.0583425!10070-101I7;0.148762!10452-106G2;0.153709!10453-106G3;0.163979!10449-106F8;0.267898!10042-101F6;0.286675!10069-101I6;0.281383!10193-103E4;0.504631!10631-108I1;0.0219559!10438-106E6;0.321497!10488-107B2;0.0459552!10196-103E7;0.014213!10071-101I8;0.932735!10071-101I8;0.0302283!10041-101F5;0.00628597!10451-106G1;0.023415!10450-106F9;0.00586704!10604-108F1;0.000775362!10605-108F2;0.379878!10606-108F3;0.135192!10603-108E9;0.157524!10497-107C2;0.416413!10448-106F7;0.0513757!10643-109A4;0.110913!10426-106D3;0.0331671!10431-106D8;0.0255319!10197-103E8;0.16544!10443-106F2;0.497219!10815-111B5;0.00265765!10816-111B6;0.0295285!10817-111B7;0.0357747!10015-101C6;0.0379922!10410-106B5;0.0808261!10054-101G9;0.00242702!10758-110E2;0.381705!10711-109H9;0.139278!10040-101F4;0.776675!10470-106I2;0.0202604!10415-106C1;0.0157281!10198-103E9;0.898558!10614-108G2;0.00867966!10612-108F9;0.00809938!10549-107H9;0.0357076!10615-108G3;0.00199586!10487-107B1;0.000284135!10433-106E1;0.032014!10688-109F4;0.82404!10444-106F3;0.131089!10444-106F3;0.0639911!10485-107A8;0.0588823!10413-106B8;0.00650077!10175-103C4;0.000665903!10161-103A8;0.0440545!12131-128D7;0.421683!10624-108H3;0.0556167!10712-109I1;0.0221288!10205-103F7;0.124184!10206-103F8;0.519211!10207-103F9;0.642632!10050-101G5;0.0193773!10051-101G6;0.9872!10016-101C7;0.525876!10046-101G1;0.358173!10778-110G4;0.622!10633-108I3;0.941883!10818-111B8;0.00335346!10819-111B9;0.00242609!10820-111C1;0.00227809!10484-107A7;0.00193158!10808-111A7;0.00164019!10169-103B7;0.819222!10153-102I9;0.029754!13425-144D5;0.085692!13433-144E4;0.000955506!13437-144E8;0.000773461!11904-125F5;0.000667829!11905-125F6;0.01673!10039-101F3;0.294728!10791-110H8;0.0274445!10017-101C8;0.0135423!10045-101F9;0.343177!10509-107D5;0.641832!10839-111E2;0.72349!10692-109F8;0.0340935!10079-102A7;0.0342716!10078-102A6;0.253842!10721-110A1;0.390642!10569-108B2;0.00146187!10570-108B3;0.0320031!10571-108B4;0.0866965!10647-109A8;0.0164243!10752-110D5;0.0122962!10782-110G8;0.344131!10726-110A6;0.00177841!10018-101C9;0.243665!10086-102B5;0.17363!10182-103D2;0.0543964!10165-103B3;0.0638596!10499-107C4;0.184454!10408-106B3;0.0192562!10019-101D1;0.46939!10068-101I5;0.00127493!10075-102A3;0.0491378!10077-102A5;0.000503965!10727-110A7;0.000404978!10775-110G1;0.341675!10412-106B7;0.253938!12231-129F8;0.0888528!12232-129F9;0.334746!12233-129G1;0.62579!12234-129G2;0.26187!10414-106B9;0.0091609!10170-103B8;0.00641448!10183-103D3;0.0103026!10150-102I6;0.0108344!10174-103C3;0.0594898!10155-103A2;0.111817!10038-101F2;0.283695!10838-111E1;0.396691!10759-110E3;0.000230054!10514-107E1;0.0296432!10465-106H6;0.0117711!10691-109F7;0.00191492!10843-111E6;0.809018!10844-111E7;0.000303976!11747-123G1;0.000669335!11748-123G2;0.021906!11749-123G3;0.0626415!11750-123G4;0.0331958!11751-123G5;0.0731385!11840-124H4;0.0148277!11752-123G6;0.0320822!11753-123G7;0.0282043!11754-123G8;0.0805874!11755-123G9;0.159035!11756-123H1;0.443094!11833-124G6;0.479763!11760-123H5;0.79532!11836-124G9;0.465608!11758-123H3;0.165604!11835-124G8;0.21968!11762-123H7;0.508635!11838-124H2;0.799474!11757-123H2;0.656543!11759-123H4;0.488547!11761-123H6;0.88778!11842-124H6;0.839385!11837-124H1;0.0803304!10568-108B1;0.899458!13230-141I8;0.00890684!13231-141I9;0.106141!10696-109G3;0.0584825!10493-107B7;0.366561!10494-107B8;0.0520933!10850-111F4;0.0172759!10851-111F5;0.0136618!10852-111F6;0.0459179!10853-111F7;0.276316!10854-111F8;0.0312241!10855-111F9;0.000895389!10856-111G1;0.0127368!10847-111F1;0.117517!10846-111E9;0.213834!10848-111F2;0.131294!10845-111E8;0.0200324!10857-111G2;0.0049954!10858-111G3;0.00311679!10156-103A3;0.10645!11901-125F2;0.0658323!11902-125F3;0.0183214!11903-125F4;0.0112013!10689-109F5;0.00581036!10648-109A9;0.00059929!10784-110H1;0.00162771!10744-110C6;0.560905!10772-110F7;0.0383946!10474-106I6;0.340411!10600-108E6;0.187589!10684-109E9;0.00224177!12226-129F3;0.0126969!12227-129F4;0.0378813!10508-107D4;0.654952!10539-107G8;0.000153682!10607-108F4;0.00017666!10555-107I6;0.000416094!10774-110F9;0.000217166!10637-108I7;0.00139691!10663-109C6;0.000974992!10728-110A8;0.00167484!10729-110A9;0.00150693!10430-106D7;0.470555!10730-110B1;0.245455!10813-111B3;9.1768e-05!10812-111B2;0.0013248!10037-101F1;0.0371747!10172-103C1;0.030406!10163-103B1;0.0111803!10076-102A4;0.0954454!10073-102A1;0.00906323!10036-101E9;0.00264256!10195-103E6;0.0160589!10277-104E7;0.0208364!10434-106E2;0.220729!10550-107I1;0.0254008!10545-107H5;0.00336914!10544-107H4;0.151091!10704-109H2;0.0794172!10510-107D6;0.85161!10558-107I9;0.164237!10020-101D2;0.000673804!10732-110B3;0.444669!10049-101G4;0.152443!10698-109G5;0.834944!10437-106E5;0.065156!10417-106C3;0.281032!10035-101E8;0.76139!10171-103B9;0.0225744!10157-103A4;0.00951778!10034-101E7;0.0493982!10072-101I9;0.0293085!10199-103F1;0.00337942!10200-103F2;0.0116576!10697-109G4;0.404984!10723-110A3;0.00028106!10179-103C8;0.913103!10160-103A7;0.00566937!10180-103C9;0.0248309!10162-103A9;0.00419558!10021-101D3;0.0231557!10840-111E3;0.0286071!10706-109H4;0.165752!10033-101E6;0.368335!10032-101E5;0.112024!10490-107B4;0.0185474!10439-106E7;0.0150407!10022-101D4;0.113741!10176-103C5;0.159231!10469-106I1;0.0112507!10067-101I4;0.0294794!10411-106B6;0.990181!10471-106I3;0.0652229!10030-101E3;0.00699723!10475-106I7;0.64733!10787-110H4;0.000223857!10477-106I9;0.000407888!10695-109G2;0.000561092!11771-123I7;0.0818382!11772-123I8;0.0115383!11773-123I9;0.00166751!10093-102C3;0.0229004!10442-106F1;0.0486175!10442-106F1;0.257652!10201-103F3;0.373517!10639-108I9;0.520494!11843-124H7;0.0439641!11841-124H5;0.022777!10693-109F9;0.0227812!10436-106E4;0.0966966!10483-107A6;0.132605!10282-104F3;0.700698!10023-101D5;0.596745!10066-101I3;0.975618!10065-101I2;0.971534!10800-110I8;0.98873!10610-108F7;0.00090317!10841-111E4;0.000239732!10541-107H1;0.000229421!10842-111E5;0.00181713!10562-108A4;0.000130175!10024-101D6;0.0151277!10064-101I1;0.0305638!10609-108F6;0.126759!10048-101G3;0.0223969!10781-110G7;0.476073!10181-103D1;0.010588!10159-103A6;0.192342!10056-101H2;0.675306!10737-110B8;0.0574234!10025-101D7;0.295174!10044-101F8;0.000541395!10424-106D1;0.00083255!10463-106H4;0.294276!10616-108G4;0.161409!10486-107A9;0.784544!10062-101H8;0.202484!10202-103F4;0.0343639!10158-103A5;0.00565286!10441-106E9;0.696378!10031-101E4;0.000439756!10063-101H9;0.0253657!10063-101H9;0.00431115!11763-123H8;0.0935208!11765-123I1;0.0804695!11768-123I4;0.11725!10807-111A6;0.188568!10790-110H7;0.000648165!10798-110I6;0.000291635!10786-110H3;0.000699425!10591-108D6;0.00727813!10593-108D8;0.00110534!10590-108D5;0.00404241!10026-101D8;0.0021587!10096-102C6;0.0104407!10168-103B6;0.000124415!10154-103A1;0.0334462!10209-103G2;0.198484!10061-101H7;0.087961!10027-101D9;0.726558!10043-101F7;0.00126497!10783-110G9;0.00166413!10028-101E1;0.0645225!10060-101H6;0.625837!10203-103F5;0.511892!10059-101H5;0.276139!10047-101G2;0.841993!10029-101E2;0.000834244!10058-101H4;0.00803687!10418-106C4;0.580295!10492-107B6;0.0345901!10694-109G1;0.017879!10797-110I5;0.190308!10057-101H3;0.166024!10100-102D1;0.509421!10055-101H1;0.164431!10204-103F6;0.638758!10191-103E2;0.0284647!10563-108A5;0.0055125
|name=motif443
|name=motif443
|tomtom_result=FEV#MA0156.1;-1;0.000138771;0.0660552;0.0841472;6;CCAGGAA;CAGGAAAT;+!Stat3#MA0144.1;2;0.000177763;0.0846153;0.0841472;7;CCAGGAA;TTCCAGGAAG;+!Eip74EF#MA0026.1;-1;0.001192;0.567394;0.303739;6;CCAGGAA;CCGGAAG;+!TEAD1#MA0090.1;1;0.00128331;0.610856;0.303739;7;CCAGGAA;CGGAGGAATGTG;-!SPIB#MA0081.1;0;0.00212971;1.01374;0.381148;7;CCAGGAA;AGAGGAA;+!STAT1#MA0137.2;5;0.00241556;1.14981;0.381148;7;CCAGGAA;GGTTTCCGGGAAATG;-!SPI1#MA0080.2;-2;0.00379591;1.80685;0.42047;5;CCAGGAA;AGGAAGT;+!ELF5#MA0136.1;-1;0.00399715;1.90264;0.42047;6;CCAGGAA;AAGGAAGTA;-!ELK1#MA0028.1;2;0.00479354;2.28172;0.453821;7;CCAGGAA;GAGCCGGAAG;+!GABPA#MA0062.2;0;0.00606805;2.88839;0.478735;7;CCAGGAA;ACCGGAAGAG;+!ASG1#MA0275.1;-1;0.00932057;4.43659;0.635961;6;CCAGGAA;CCGGAA;+!YBR239C#MA0420.1;0;0.00978868;4.65941;0.635961;7;CCAGGAA;ACCGGAAC;+!LYS14#MA0325.1;-1;0.0111718;5.31779;0.635961;6;CCAGGAA;CCGGAATT;+!GABPA#MA0062.2;-1;0.0121242;5.77111;0.635961;6;CCAGGAA;CCGGAAGTGGC;+!MOT3#MA0340.1;-1;0.0122295;5.82125;0.635961;6;CCAGGAA;TAGGCA;+!ELK4#MA0076.1;0;0.0123375;5.87264;0.635961;7;CCAGGAA;ACCGGAAGT;+!CAT8#MA0280.1;-1;0.0137017;6.52202;0.635961;6;CCAGGAA;CCGGAA;+!ETS1#MA0098.1;-2;0.0142292;6.7731;0.635961;5;CCAGGAA;CGGAAA;-!GCR2#MA0305.1;-2;0.0147556;7.02367;0.635961;5;CCAGGAA;AGGAAGC;-!SPI1#MA0080.2;-2;0.0147783;7.03449;0.635961;5;CCAGGAA;CGGAAG;+!IXR1#MA0323.1;2;0.0168269;8.00959;0.691903;7;CCAGGAA;AAGCCGGAAGCGGGG;+!PUT3#MA0358.1;1;0.01754;8.34902;0.691903;7;CCAGGAA;CCCGGGAA;+
}}
}}

Latest revision as of 12:25, 7 September 2012

Full Name: motif443

Motif matrix
POACGT
0117739243891703511755
0207091800
0370918000
0400709180
0500709180
0670918000
0770918000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
FEV#MA0156.1-10.0001387710.06605520.08414726CCAGGAACAGGAAAT+
Stat3#MA0144.120.0001777630.08461530.08414727CCAGGAATTCCAGGAAG+
Eip74EF#MA0026.1-10.0011920.5673940.3037396CCAGGAACCGGAAG+
TEAD1#MA0090.110.001283310.6108560.3037397CCAGGAACGGAGGAATGTG-
SPIB#MA0081.100.002129711.013740.3811487CCAGGAAAGAGGAA+
STAT1#MA0137.250.002415561.149810.3811487CCAGGAAGGTTTCCGGGAAATG-
SPI1#MA0080.2-20.003795911.806850.420475CCAGGAAAGGAAGT+
ELF5#MA0136.1-10.003997151.902640.420476CCAGGAAAAGGAAGTA-
ELK1#MA0028.120.004793542.281720.4538217CCAGGAAGAGCCGGAAG+
GABPA#MA0062.200.006068052.888390.4787357CCAGGAAACCGGAAGAG+
ASG1#MA0275.1-10.009320574.436590.6359616CCAGGAACCGGAA+
YBR239C#MA0420.100.009788684.659410.6359617CCAGGAAACCGGAAC+
LYS14#MA0325.1-10.01117185.317790.6359616CCAGGAACCGGAATT+
GABPA#MA0062.2-10.01212425.771110.6359616CCAGGAACCGGAAGTGGC+
MOT3#MA0340.1-10.01222955.821250.6359616CCAGGAATAGGCA+
ELK4#MA0076.100.01233755.872640.6359617CCAGGAAACCGGAAGT+
CAT8#MA0280.1-10.01370176.522020.6359616CCAGGAACCGGAA+
ETS1#MA0098.1-20.01422926.77310.6359615CCAGGAACGGAAA-
GCR2#MA0305.1-20.01475567.023670.6359615CCAGGAAAGGAAGC-
SPI1#MA0080.2-20.01477837.034490.6359615CCAGGAACGGAAG+
IXR1#MA0323.120.01682698.009590.6919037CCAGGAAAAGCCGGAAGCGGGG+
PUT3#MA0358.110.017548.349020.6919037CCAGGAACCCGGGAA+
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