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MacroAPE 1083:Motif CAGNAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;9936;0;0!02;9936;0;0;0!03;0;0;9936;0!04;2484;2484;2484;2484!05;9936;0;0;0!06;0;0;0;9936 |macroape_1083_sample_pvalues=11376-118A8;0.0436...")
 
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89843!10827-111C8;0.368025!10789-110H6;0.898623!10828-111C9;0.53748!10788-110H5;0.860436!10792-110H9;0.240875!10765-110E9;0.951678!10829-111D1;0.222827!10830-111D2;0.425789!10831-111D3;0.8688!10832-111D4;0.896432!10833-111D5;0.201274!10764-110E8;0.331997!10770-110F5;0.369102!10399-106A3;0.837904!10400-106A4;0.244401!10405-106A9;0.295974!10834-111D6;0.22303!10835-111D7;0.691769!10836-111D8;0.190521!10837-111D9;0.108775!10699-109G6;0.151587!10802-111A1;0.962347!10796-110I4;0.199559!10010-101C1;0.157328!10810-111A9;0.561596!10421-106C7;0.101826!10708-109H6;0.267044!12235-129G3;0.0607488!12236-129G4;0.163972!12237-129G5;0.260554!10167-103B5;0.233648!10151-102I7;0.179686!10428-106D5;0.201016!10795-110I3;0.778457!10805-111A4;0.251643!10052-101G7;0.318687!10189-103D9;0.374857!10589-108D4;0.201298!10425-106D2;0.60999!10427-106D4;0.0301483!10702-109G9;0.251333!10432-106D9;0.198605!10496-107C1;0.0541638!10718-109I7;0.0393581!10011-101C2;0.2987!10053-101G8;0.417628!10686-109F2;0.238937!10084-102B3;0.465022!10012-101C3;0.0907956!10085-102B4;0.10139!10482-107A5;0.272255!10419-106C5;0.017834!10080-102A8;0.0193241!10760-110E4;0.948422!10709-109H7;0.169197!10710-109H8;0.457457!10703-109H1;0.0142308!10719-109I8;0.927716!10642-109A3;0.463935!10177-103C6;0.528925!10164-103B2;0.175046!10173-103C2;0.168209!10166-103B4;0.222393!10083-102B2;0.304572!10188-103D8;0.21481!10552-107I3;0.141337!10553-107I4;0.0990808!10013-101C4;0.000179787!10536-107G5;0.373571!10618-108G6;0.151163!10423-106C9;0.191432!10785-110H2;0.0226757!12238-129G6;0.0971873!12239-129G7;0.649421!12240-129G8;0.618636!10416-106C2;0.753847!10801-110I9;0.461768!10766-110F1;0.813371!10824-111C5;0.429178!10825-111C6;0.152794!10826-111C7;0.188455!10454-106G4;0.15411!10409-106B4;0.137091!10638-108I8;0.214726!10636-108I6;0.216992!10513-107D9;0.162944!10420-106C6;0.0689401!10082-102B1;0.226704!10014-101C5;0.123191!10070-101I7;0.257274!10452-106G2;0.227133!10453-106G3;0.0322689!10449-106F8;0.0674942!10042-101F6;0.0800643!10069-101I6;0.130416!10193-103E4;0.260118!10631-108I1;0.0841158!10438-106E6;0.606087!10488-107B2;0.0127577!10196-103E7;0.1881!10071-101I8;0.374423!10071-101I8;0.0349983!10041-101F5;0.315155!10451-106G1;0.157443!10450-106F9;0.126739!10604-108F1;0.146783!10605-108F2;0.0576314!10606-108F3;0.0510671!10603-108E9;0.0208246!10497-107C2;0.071901!10448-106F7;0.291212!10643-109A4;0.139684!10426-106D3;0.0832187!10431-106D8;0.0062541!10197-103E8;0.0593787!10443-106F2;0.368953!10815-111B5;0.0460038!10816-111B6;0.129295!10817-111B7;0.0488285!10015-101C6;0.13258!10410-106B5;0.668774!10054-101G9;0.0761603!10758-110E2;0.266532!10711-109H9;0.822224!10040-101F4;0.161036!10470-106I2;0.110372!10415-106C1;0.0151467!10198-103E9;0.207601!10614-108G2;0.191968!10612-108F9;0.224593!10549-107H9;0.00183828!10615-108G3;0.0302221!10487-107B1;0.67911!10433-106E1;0.0146958!10688-109F4;0.320219!10444-106F3;0.0019203!10444-106F3;0.753368!10485-107A8;0.77278!10413-106B8;0.879198!10175-103C4;0.928277!10161-103A8;0.0654938!12131-128D7;0.105195!10624-108H3;0.294764!10712-109I1;0.115645!10205-103F7;0.110121!10206-103F8;0.154409!10207-103F9;0.232784!10050-101G5;0.314547!10051-101G6;0.704109!10016-101C7;0.398996!10046-101G1;0.378239!10778-110G4;0.272543!10633-108I3;0.666521!10818-111B8;0.112031!10819-111B9;0.614262!10820-111C1;0.510373!10484-107A7;0.551412!10808-111A7;0.0681994!10169-103B7;0.917012!10153-102I9;0.118366!13425-144D5;0.246106!13433-144E4;0.231393!13437-144E8;0.275348!11904-125F5;0.27223!11905-125F6;0.0343647!10039-101F3;0.000440208!10791-110H8;0.11815!10017-101C8;0.0185515!10045-101F9;0.230963!10509-107D5;0.507778!10839-111E2;0.114073!10692-109F8;0.00494308!10079-102A7;0.0352195!10078-102A6;0.0671786!10721-110A1;0.323212!10569-108B2;0.465131!10570-108B3;0.032747!10571-108B4;0.0774107!10647-109A8;0.0333981!10752-110D5;0.678705!10782-110G8;0.186411!10726-110A6;0.853927!10018-101C9;0.199234!10086-102B5;0.223406!10182-103D2;0.594786!10165-103B3;0.0982111!10499-107C4;0.128565!10408-106B3;0.276775!10019-101D1;0.274213!10068-101I5;0.493806!10075-102A3;0.539674!10077-102A5;0.358033!10727-110A7;0.234434!10775-110G1;0.0425674!10412-106B7;0.517822!12231-129F8;0.00335048!12232-129F9;0.218036!12233-129G1;0.922676!12234-129G2;0.44805!10414-106B9;0.178755!10170-103B8;0.0423483!10183-103D3;0.16056!10150-102I6;0.103567!10174-103C3;0.137831!10155-103A2;0.197722!10038-101F2;0.231038!10838-111E1;0.103185!10759-110E3;0.0069428!10514-107E1;0.188638!10465-106H6;0.172093!10691-109F7;0.278554!10843-111E6;0.194671!10844-111E7;0.15657!11747-123G1;0.513887!11748-123G2;0.325454!11749-123G3;0.401216!11750-123G4;0.226468!11751-123G5;0.0517381!11840-124H4;0.0458666!11752-123G6;0.0149523!11753-123G7;0.0390384!11754-123G8;0.0726762!11755-123G9;0.300315!11756-123H1;0.582802!11833-124G6;0.405281!11760-123H5;0.24322!11836-124G9;0.235992!11758-123H3;0.083802!11835-124G8;0.132894!11762-123H7;0.0188914!11838-124H2;0.787327!11757-123H2;0.580437!11759-123H4;0.843698!11761-123H6;0.0994127!11842-124H6;0.338095!11837-124H1;0.0434333!10568-108B1;0.0156015!13230-141I8;0.52572!13231-141I9;0.0548772!10696-109G3;0.0722964!10493-107B7;0.942735!10494-107B8;0.117299!10850-111F4;0.121912!10851-111F5;0.248667!10852-111F6;0.93418!10853-111F7;0.0872402!10854-111F8;0.560728!10855-111F9;0.747282!10856-111G1;0.84233!10847-111F1;0.489985!10846-111E9;0.458938!10848-111F2;0.463929!10845-111E8;0.419402!10857-111G2;0.134359!10858-111G3;0.315579!10156-103A3;0.447593!11901-125F2;0.130376!11902-125F3;0.059854!11903-125F4;0.126036!10689-109F5;0.143428!10648-109A9;0.0681622!10784-110H1;0.531858!10744-110C6;0.010982!10772-110F7;0.891808!10474-106I6;0.262405!10600-108E6;0.731995!10684-109E9;0.305167!12226-129F3;0.914273!12227-129F4;0.0425047!10508-107D4;0.482197!10539-107G8;0.557998!10607-108F4;0.809417!10555-107I6;0.336843!10774-110F9;0.832465!10637-108I7;0.275196!10663-109C6;0.241561!10728-110A8;0.174334!10729-110A9;0.0703419!10430-106D7;0.274802!10730-110B1;0.0726151!10813-111B3;0.590993!10812-111B2;0.227592!10037-101F1;0.288488!10172-103C1;0.120609!10163-103B1;0.114783!10076-102A4;0.170077!10073-102A1;0.0870356!10036-101E9;0.282493!10195-103E6;0.11967!10277-104E7;0.128475!10434-106E2;0.0352748!10550-107I1;0.0183742!10545-107H5;0.038231!10544-107H4;0.0101887!10704-109H2;0.0907883!10510-107D6;0.979304!10558-107I9;0.0864414!10020-101D2;0.00697765!10732-110B3;0.565394!10049-101G4;0.188952!10698-109G5;0.137449!10437-106E5;0.129586!10417-106C3;0.794611!10035-101E8;0.0102487!10171-103B9;0.0971452!10157-103A4;0.0943763!10034-101E7;0.14022!10072-101I9;0.101271!10199-103F1;0.298924!10200-103F2;0.472978!10697-109G4;0.443152!10723-110A3;0.364013!10179-103C8;0.0791485!10160-103A7;0.245549!10180-103C9;0.229736!10162-103A9;0.251916!10021-101D3;0.319259!10840-111E3;0.919289!10706-109H4;0.225384!10033-101E6;0.126538!10032-101E5;0.0576336!10490-107B4;0.10267!10439-106E7;0.24645!10022-101D4;0.425488!10176-103C5;0.413342!10469-106I1;0.131479!10067-101I4;0.00590844!10411-106B6;0.109892!10471-106I3;0.608056!10030-101E3;0.0949259!10475-106I7;0.240848!10787-110H4;0.136827!10477-106I9;0.25463!10695-109G2;0.0303763!11771-123I7;0.488642!11772-123I8;0.281608!11773-123I9;0.144114!10093-102C3;0.0220995!10442-106F1;0.402622!10442-106F1;0.930149!10201-103F3;0.912115!10639-108I9;0.267013!11843-124H7;0.0188207!11841-124H5;0.463783!10693-109F9;0.353875!10436-106E4;0.0192228!10483-107A6;0.00153694!10282-104F3;0.0698533!10023-101D5;0.90856!10066-101I3;0.966836!10065-101I2;0.396083!10800-110I8;0.370999!10610-108F7;0.351561!10841-111E4;0.374291!10541-107H1;0.101092!10842-111E5;0.0335926!10562-108A4;0.54477!10024-101D6;0.445667!10064-101I1;0.355469!10609-108F6;0.0320456!10048-101G3;0.569597!10781-110G7;0.423804!10181-103D1;0.881289!10159-103A6;0.0970692!10056-101H2;0.142606!10737-110B8;0.0785108!10025-101D7;0.969657!10044-101F8;0.292533!10424-106D1;0.230265!10463-106H4;0.188809!10616-108G4;0.00408091!10486-107A9;0.22373!10062-101H8;0.0656629!10202-103F4;0.0902584!10158-103A5;0.222408!10441-106E9;0.119383!10031-101E4;0.0010325!10063-101H9;0.0999474!10063-101H9;0.335745!11763-123H8;0.0539809!11765-123I1;0.183656!11768-123I4;0.177566!10807-111A6;0.118778!10790-110H7;0.0879424!10798-110I6;0.107007!10786-110H3;0.107808!10591-108D6;0.0599102!10593-108D8;0.0410941!10590-108D5;0.0136913!10026-101D8;0.0414985!10096-102C6;0.592676!10168-103B6;0.512878!10154-103A1;0.127629!10209-103G2;0.143276!10061-101H7;0.447546!10027-101D9;0.415299!10043-101F7;0.572434!10783-110G9;0.837023!10028-101E1;0.931115!10060-101H6;0.675479!10203-103F5;0.462873!10059-101H5;0.573654!10047-101G2;0.605827!10029-101E2;0.432551!10058-101H4;0.699179!10418-106C4;0.271939!10492-107B6;0.0209846!10694-109G1;0.315859!10797-110I5;0.499651!10057-101H3;0.0846862!10100-102D1;0.313476!10055-101H1;0.290113!10204-103F6;0.158762!10191-103E2;0.715393!10563-108A5;0.131917
|name=motif_CAGNAT
|name=motif_CAGNAT
|tomtom_result=ttk#MA0460.1;0;0.0111138;5.29015;1;6;CAGAAT;AAGGATAAT;+!znf143#MA0088.1;7;0.0150005;7.14022;1;6;CAGAAT;GATTTCCCATAATGCCTTGC;+
}}
}}

Latest revision as of 12:22, 7 September 2012

Full Name: motif_CAGNAT

Motif matrix
POACGT
010993600
029936000
030099360
042484248424842484
059936000
060009936

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ttk#MA0460.100.01111385.2901516CAGAATAAGGATAAT+
znf143#MA0088.170.01500057.1402216CAGAATGATTTCCCATAATGCCTTGC+
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