Personal tools

FFCP PHASE1:Hg19::chr5:42804827..42804883,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr5:42804827..42804883,-
|id=chr5:42804827..42804883,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0002619;7.91e-09;3!CL:0000235;3.65e-07;6!CL:0000182;4.12e-07;12
|ontology_enrichment_development_v019=UBERON:0004161;1.63e-07;11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_uberon=UBERON:0007023!4.72e-49!115;UBERON:0001049!1.56e-18!57;UBERON:0005068!1.56e-18!57;UBERON:0006241!1.56e-18!57;UBERON:0007135!1.56e-18!57;UBERON:0002346!9.21e-15!90;UBERON:0003075!2.07e-14!86;UBERON:0007284!2.07e-14!86;UBERON:0002616!7.21e-14!59;UBERON:0005743!7.50e-14!86;UBERON:0001017!1.16e-13!82;UBERON:0000073!1.29e-12!94;UBERON:0001016!1.29e-12!94;UBERON:0003080!2.19e-12!42;UBERON:0000955!6.00e-12!69;UBERON:0006238!6.00e-12!69;UBERON:0002780!1.09e-11!41;UBERON:0001890!1.09e-11!41;UBERON:0006240!1.09e-11!41;UBERON:0000062!1.96e-10!511;UBERON:0002020!6.44e-10!34;UBERON:0003528!6.44e-10!34;UBERON:0001893!1.88e-09!34;UBERON:0002791!4.25e-09!33;UBERON:0000468!8.10e-09!659;UBERON:0000481!1.27e-08!347;UBERON:0002298!2.89e-08!8;UBERON:0003056!2.95e-08!61;UBERON:0001869!3.85e-08!32;UBERON:0002308!1.16e-07!9;UBERON:0000125!1.16e-07!9;UBERON:0003076!1.23e-07!15;UBERON:0003057!1.23e-07!15;UBERON:0000064!2.32e-07!219;UBERON:0004921!2.65e-07!129;UBERON:0004185!2.65e-07!129;UBERON:0000922!4.74e-07!612;UBERON:0000477!6.01e-07!286;UBERON:0000153!6.40e-07!129;UBERON:0007811!6.40e-07!129
|ontology_enrichment_uberon=UBERON:0007023!4.72e-49!115;UBERON:0001049!1.56e-18!57;UBERON:0005068!1.56e-18!57;UBERON:0006241!1.56e-18!57;UBERON:0007135!1.56e-18!57;UBERON:0002346!9.21e-15!90;UBERON:0003075!2.07e-14!86;UBERON:0007284!2.07e-14!86;UBERON:0002616!7.21e-14!59;UBERON:0005743!7.50e-14!86;UBERON:0001017!1.16e-13!82;UBERON:0000073!1.29e-12!94;UBERON:0001016!1.29e-12!94;UBERON:0003080!2.19e-12!42;UBERON:0000955!6.00e-12!69;UBERON:0006238!6.00e-12!69;UBERON:0002780!1.09e-11!41;UBERON:0001890!1.09e-11!41;UBERON:0006240!1.09e-11!41;UBERON:0000062!1.96e-10!511;UBERON:0002020!6.44e-10!34;UBERON:0003528!6.44e-10!34;UBERON:0001893!1.88e-09!34;UBERON:0002791!4.25e-09!33;UBERON:0000468!8.10e-09!659;UBERON:0000481!1.27e-08!347;UBERON:0002298!2.89e-08!8;UBERON:0003056!2.95e-08!61;UBERON:0001869!3.85e-08!32;UBERON:0002308!1.16e-07!9;UBERON:0000125!1.16e-07!9;UBERON:0003076!1.23e-07!15;UBERON:0003057!1.23e-07!15;UBERON:0000064!2.32e-07!219;UBERON:0004921!2.65e-07!129;UBERON:0004185!2.65e-07!129;UBERON:0000922!4.74e-07!612;UBERON:0000477!6.01e-07!286;UBERON:0000153!6.40e-07!129;UBERON:0007811!6.40e-07!129
|ontology_enrichment_uberon_v019=UBERON:0007023;1.15e-09;114!UBERON:0006947;1.65e-08;3!UBERON:0004054;1.65e-08;3!UBERON:0002107;2.24e-07;19!UBERON:0006925;2.24e-07;19
|phase1_expression=1.09007027562334,1.49870366723688,2.67813367782345,0,2.23480547213644,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,15.4501677225548,8.74512898251245,13.9090806522461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,19.0132552232746,13.7595810334868,18.3144871071235,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.380508304469197,0,0,2.21595305478658,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,8.51366464488333,11.5519131029389,16.8667151586425,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,1.02511319404561,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,9.58281408323817,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0.562677665642051,0,0,0,2.19172787076177,1.10513566212459,0,0,0,0,0,0,0,0.986434056369336,0,0,0,1.20598527610407,0,0,0.174919999992391,2.17499872630438,0,0.254253650292766,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,1.47773809476774,0.87754158861589,0,0.139423744278603,0.846452843541768,0,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,2.29989667708682,4.888241159469,0,0,0,0.943615861729479,3.21031058919516,3.27970224015475,0,0.19566461893209,0,3.55125962564451,3.62972148145992,0,1.5796644907122,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,5.06707337901887,0,0,0,0,0.969890164884194,0,1.35588444468319,0,0,0.253243183823515,0,0,2.13452994739353,0.799238438328521,0.144090417154106,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,1.20084057741958,2.19048606227189,0,0,0,0.837847203816763,1.3749625440701,0.717873024576814,0.399358000997982,0,0.446342914883745,0.134366944973453,0,0,2.12714592229504,3.29663433524666,2.49393112260484,0,0,0,0.953423842781029,0,0,0.415440338029185,0,0,0.303747783290123,0,0.788057072991982,0.314727528809989,0,0,0,8.5763439164804,1.32418394073086,0,0.542999601753713,0,0.326587360109409,0,0,0,0.453248366080503,8.79313402068495,9.27548222385549,1.68067843270016,3.83474545053801,0,0,4.37828391527548,1.72924735609633,4.14239055347196,2.97699613087171,0.197611631897944,0,0.638341257770182,0.544017803369474,2.2562090462043,0.612691153526923,0.983617892129413,0,0,1.58634144372552,1.001527445652,2.29363678276028,2.44043913381075,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.06287460050841,0.743614585554013,0,0,0,0,0,0.3062454773532,0.0642292250964595,2.8339315265117,1.43670473151436,2.2562800066483,0.252071696221718,0.0691572524642179,1.29180516505481,15.704636228507,0,0,0,0,0,0,0.994581110581374,0.601682626794058,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,5.95453414067153,0,0,0,0,1.82089681270989,0.227662191351298,0.79832133146375,0,0,0.40781839786099,0.263091094251396,0,0,1.0989032999072,0.471346769748006,0,3.65263488203798,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,16.5120949574462,0,0,0,0,0,0.121917924982269,1.29485767437579,0.410651227424988,0,6.31424290976881,0.233939463462106,0,0,0,0,0,7.56306749457858,8.52382285965433,1.41095188908457,0.735444965261716,0.235676547101626,5.30032861210352,2.67341760294377,0.8453114551668,0,2.81951753939561,0.322289439867886,0,0,0,0,0,0.458729283404541,5.44690415975515,0,0,0.436350690340377,6.34832208618481,0,0.924351257262837,0.432626562123789,0,0.764859003745869,0,0,0,0,0,1.43979526614655,0.267964130156178,2.48750831837634,2.37895890482359,2.98527574661373,0.714193294391221,0.322944549180031,0.124149428591716,0,0.700118741059814,1.21270313374932,2.17716747896961,0.684466602170562,0.202056159043763,0.502055437748735,1.66330178273007,0,0,0,0.0898252021065869,0,0.244482888365733,1.62758471326295,1.33151354837103,1.81146414231924,0
|phase1_expression=1.09007027562334,1.49870366723688,2.67813367782345,0,2.23480547213644,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,15.4501677225548,8.74512898251245,13.9090806522461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,19.0132552232746,13.7595810334868,18.3144871071235,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.380508304469197,0,0,2.21595305478658,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,8.51366464488333,11.5519131029389,16.8667151586425,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,1.02511319404561,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,9.58281408323817,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0.562677665642051,0,0,0,2.19172787076177,1.10513566212459,0,0,0,0,0,0,0,0.986434056369336,0,0,0,1.20598527610407,0,0,0.174919999992391,2.17499872630438,0,0.254253650292766,0.472775363535873,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,1.47773809476774,0.87754158861589,0,0.139423744278603,0.846452843541768,0,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,2.29989667708682,4.888241159469,0,0,0,0.943615861729479,3.21031058919516,3.27970224015475,0,0.19566461893209,0,3.55125962564451,3.62972148145992,0,1.5796644907122,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,5.06707337901887,0,0,0,0,0.969890164884194,0,1.35588444468319,0,0,0.253243183823515,0,0,2.13452994739353,0.799238438328521,0.144090417154106,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,1.20084057741958,2.19048606227189,0,0,0,0.837847203816763,1.3749625440701,0.717873024576814,0.399358000997982,0,0.446342914883745,0.134366944973453,0,0,2.12714592229504,3.29663433524666,2.49393112260484,0,0,0,0.953423842781029,0,0,0.415440338029185,0,0,0.303747783290123,0,0.788057072991982,0.314727528809989,0,0,0,8.5763439164804,1.32418394073086,0,0.542999601753713,0,0.326587360109409,0,0,0,0.453248366080503,8.79313402068495,9.27548222385549,1.68067843270016,3.83474545053801,0,0,4.37828391527548,1.72924735609633,4.14239055347196,2.97699613087171,0.197611631897944,0,0.638341257770182,0.544017803369474,2.2562090462043,0.612691153526923,0.983617892129413,0,0,1.58634144372552,1.001527445652,2.29363678276028,2.44043913381075,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.06287460050841,0.743614585554013,0,0,0,0,0,0.3062454773532,0.0642292250964595,2.8339315265117,1.43670473151436,2.2562800066483,0.252071696221718,0.0691572524642179,1.29180516505481,15.704636228507,0,0,0,0,0,0,0.994581110581374,0.601682626794058,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,5.95453414067153,0,0,0,0,1.82089681270989,0.227662191351298,0.79832133146375,0,0,0.40781839786099,0.263091094251396,0,0,1.0989032999072,0.471346769748006,0,3.65263488203798,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,16.5120949574462,0,0,0,0,0,0.121917924982269,1.29485767437579,0.410651227424988,0,6.31424290976881,0.233939463462106,0,0,0,0,0,7.56306749457858,8.52382285965433,1.41095188908457,0.735444965261716,0.235676547101626,5.30032861210352,2.67341760294377,0.8453114551668,0,2.81951753939561,0.322289439867886,0,0,0,0,0,0.458729283404541,5.44690415975515,0,0,0.436350690340377,6.34832208618481,0,0.924351257262837,0.432626562123789,0,0.764859003745869,0,0,0,0,0,1.43979526614655,0.267964130156178,2.48750831837634,2.37895890482359,2.98527574661373,0.714193294391221,0.322944549180031,0.124149428591716,0,0.700118741059814,1.21270313374932,2.17716747896961,0.684466602170562,0.202056159043763,0.502055437748735,1.66330178273007,0,0,0,0.0898252021065869,0,0.244482888365733,1.62758471326295,1.33151354837103,1.81146414231924,0
|short_description=p@chr5:42804827..42804883,-
|short_description=p@chr5:42804827..42804883,-
}}
}}

Revision as of 00:12, 13 August 2012

Short description:p@chr5:42804827..42804883, -
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:42804827..42804883, -
Coexpression cluster:C951_CD14_Hepatocyte_liver_small_Monocytederived_substantia_spinal
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.