FFCP PHASE1:Hg19::chr9:139907627..139907638,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr9:139907627..139907638,- | |id=chr9:139907627..139907638,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.63e-07;3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.81e-20;1!UBERON:0003056;1.87e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.26e-32!57;UBERON:0005068!7.26e-32!57;UBERON:0006241!7.26e-32!57;UBERON:0007135!7.26e-32!57;UBERON:0001017!2.83e-26!82;UBERON:0002616!3.19e-26!59;UBERON:0005743!5.96e-26!86;UBERON:0000955!8.49e-26!69;UBERON:0006238!8.49e-26!69;UBERON:0002780!1.18e-25!41;UBERON:0001890!1.18e-25!41;UBERON:0006240!1.18e-25!41;UBERON:0007023!4.80e-25!115;UBERON:0003080!7.11e-25!42;UBERON:0002020!2.17e-24!34;UBERON:0003528!2.17e-24!34;UBERON:0001893!3.26e-24!34;UBERON:0000073!4.61e-24!94;UBERON:0001016!4.61e-24!94;UBERON:0003075!5.09e-23!86;UBERON:0007284!5.09e-23!86;UBERON:0002791!6.56e-23!33;UBERON:0002346!1.61e-21!90;UBERON:0001869!8.60e-21!32;UBERON:0003056!1.57e-17!61;UBERON:0000033!8.89e-16!123;UBERON:0000153!1.86e-15!129;UBERON:0007811!1.86e-15!129;UBERON:0002619!4.03e-15!22;UBERON:0002420!4.56e-15!9;UBERON:0007245!4.56e-15!9;UBERON:0010009!4.56e-15!9;UBERON:0010011!4.56e-15!9;UBERON:0000454!4.56e-15!9;UBERON:0002308!6.12e-15!9;UBERON:0000125!6.12e-15!9;UBERON:0001950!2.66e-14!20;UBERON:0000956!6.20e-13!25;UBERON:0000203!6.20e-13!25;UBERON:0004121!3.31e-12!169;UBERON:0000924!1.16e-11!173;UBERON:0006601!1.16e-11!173;UBERON:0009663!3.39e-11!7;UBERON:0001871!6.09e-10!7;UBERON:0002298!8.81e-10!8;UBERON:0000200!9.19e-09!6;UBERON:0000025!9.20e-09!194;UBERON:0003076!4.01e-08!15;UBERON:0003057!4.01e-08!15;UBERON:0000064!7.42e-08!219;UBERON:0002771!1.19e-07!3;UBERON:0006331!1.27e-07!3;UBERON:0000477!1.34e-07!286;UBERON:0004732!1.81e-07!13;UBERON:0000349!2.18e-07!5;UBERON:0000988!2.96e-07!3;UBERON:0004111!7.14e-07!241;UBERON:0000475!8.78e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!7.26e-32!57;UBERON:0005068!7.26e-32!57;UBERON:0006241!7.26e-32!57;UBERON:0007135!7.26e-32!57;UBERON:0001017!2.83e-26!82;UBERON:0002616!3.19e-26!59;UBERON:0005743!5.96e-26!86;UBERON:0000955!8.49e-26!69;UBERON:0006238!8.49e-26!69;UBERON:0002780!1.18e-25!41;UBERON:0001890!1.18e-25!41;UBERON:0006240!1.18e-25!41;UBERON:0007023!4.80e-25!115;UBERON:0003080!7.11e-25!42;UBERON:0002020!2.17e-24!34;UBERON:0003528!2.17e-24!34;UBERON:0001893!3.26e-24!34;UBERON:0000073!4.61e-24!94;UBERON:0001016!4.61e-24!94;UBERON:0003075!5.09e-23!86;UBERON:0007284!5.09e-23!86;UBERON:0002791!6.56e-23!33;UBERON:0002346!1.61e-21!90;UBERON:0001869!8.60e-21!32;UBERON:0003056!1.57e-17!61;UBERON:0000033!8.89e-16!123;UBERON:0000153!1.86e-15!129;UBERON:0007811!1.86e-15!129;UBERON:0002619!4.03e-15!22;UBERON:0002420!4.56e-15!9;UBERON:0007245!4.56e-15!9;UBERON:0010009!4.56e-15!9;UBERON:0010011!4.56e-15!9;UBERON:0000454!4.56e-15!9;UBERON:0002308!6.12e-15!9;UBERON:0000125!6.12e-15!9;UBERON:0001950!2.66e-14!20;UBERON:0000956!6.20e-13!25;UBERON:0000203!6.20e-13!25;UBERON:0004121!3.31e-12!169;UBERON:0000924!1.16e-11!173;UBERON:0006601!1.16e-11!173;UBERON:0009663!3.39e-11!7;UBERON:0001871!6.09e-10!7;UBERON:0002298!8.81e-10!8;UBERON:0000200!9.19e-09!6;UBERON:0000025!9.20e-09!194;UBERON:0003076!4.01e-08!15;UBERON:0003057!4.01e-08!15;UBERON:0000064!7.42e-08!219;UBERON:0002771!1.19e-07!3;UBERON:0006331!1.27e-07!3;UBERON:0000477!1.34e-07!286;UBERON:0004732!1.81e-07!13;UBERON:0000349!2.18e-07!5;UBERON:0000988!2.96e-07!3;UBERON:0004111!7.14e-07!241;UBERON:0000475!8.78e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;3.59e-37;2!UBERON:0000122;3.59e-37;2!UBERON:0002771;9.82e-37;2!UBERON:0002038;9.81e-20;1!UBERON:0000941;9.81e-20;1!UBERON:0001785;9.81e-20;1!UBERON:0002464;9.81e-20;1!UBERON:0004904;9.81e-20;1!UBERON:0001021;9.81e-20;1!UBERON:0009661;9.81e-20;1!UBERON:0002950;9.81e-20;1!UBERON:0001891;9.81e-20;1!UBERON:0002336;2.71e-19;1!UBERON:0011215;2.71e-19;1!UBERON:0001018;2.71e-19;1!UBERON:0002473;2.71e-19;1!UBERON:0005340;2.71e-19;1!UBERON:0003544;2.71e-19;1!UBERON:0005970;2.71e-19;1!UBERON:0002316;2.71e-19;1!UBERON:0001020;2.71e-19;1!UBERON:0002437;2.71e-19;1!UBERON:0000073;5.44e-18;53!UBERON:0002616;5.44e-18;53!UBERON:0002780;7.70e-16;41!UBERON:0001890;7.70e-16;41!UBERON:0001893;1.44e-14;34!UBERON:0000200;5.76e-13;6!UBERON:0009663;2.24e-11;7!UBERON:0001871;2.98e-11;6!UBERON:0002791;9.75e-11;32!UBERON:0003714;1.50e-10;2!UBERON:0001897;2.48e-10;2!UBERON:0001954;2.48e-10;2!UBERON:0001875;2.48e-10;2!UBERON:0003022;2.48e-10;2!UBERON:0002421;2.48e-10;2!UBERON:0006514;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0002600;2.48e-10;2!UBERON:0003528;6.18e-10;34!UBERON:0002020;6.18e-10;34!UBERON:0002420;4.70e-09;9!UBERON:0000125;4.70e-09;9!UBERON:0007245;4.70e-09;9!UBERON:0002308;4.70e-09;9!UBERON:0010009;4.70e-09;9!UBERON:0010011;4.70e-09;9!UBERON:0000454;4.70e-09;9!UBERON:0002619;1.16e-07;22!UBERON:0000955;1.48e-07;68!UBERON:0001016;2.32e-07;83!UBERON:0001896;2.63e-07;3!UBERON:0002114;2.63e-07;2!UBERON:0005290;2.63e-07;3!UBERON:0001869;2.70e-07;32!UBERON:0000956;7.71e-07;25!UBERON:0000203;7.71e-07;25 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.303747783290123,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.79339561045614,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.3755727921195,0,1.10929051536852,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.968853873791107,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,2.29343333042322,0,0.679914901909147,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,1.65492793379032,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,1.50595916781192,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.303747783290123,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.79339561045614,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.3755727921195,0,1.10929051536852,0.496771223531068,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.968853873791107,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,2.29343333042322,0,0.679914901909147,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,1.65492793379032,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p28@ABCA2 | |short_description=p28@ABCA2 | ||
}} | }} |
Revision as of 19:47, 11 August 2012
Short description: | p28@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -12bp_to_ENST00000398210_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | E9PHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.