UBERON:0008811: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000079 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:44, 27 June 2012
| Name: | intromittent organ | ||
|---|---|---|---|
| Definition: | "an external organ of a male organism that is specialized to deliver sperm during copulation. Intromittent organs are found most often in terrestrial species, as most aquatic species fertilize their eggs externally, although there are exceptions[WP]." [Wikipedia:Intromittent_organ] | ||
| Xrefs: |
| ||
| Synonyms: | "aedeagus" NARROW SENSU [FBbt:00004850] | ||
| Comments: | this is a broad grouping class connecting a number of different analagous organs by their function. We place the insect aedeagus here rather than penis, although this is somewhat arbitrary given the broadness of the current definition | ||
| Subset: |
grouping_class organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003135(male reproductive organ) |
|---|---|
| part_of: | UBERON:0000079(male reproductive system) |
Children
| is a: | UBERON:0000989 (penis) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10200-103F2 (penis, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008811 (intromittent organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:53068923..53068932,-#_c8b8384b7b0ade5ec19aa6751a31d007 | p@chr12:53068923..53068932, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:53068889..53068898,-#_c8b8384b7b0ade5ec19aa6751a31d007 | p@chr12:53068889..53068898, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:53068923..53068932,-#_c8b8384b7b0ade5ec19aa6751a31d007 | p@chr12:53068923..53068932, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:53068889..53068898,-#_c8b8384b7b0ade5ec19aa6751a31d007 | p@chr12:53068889..53068898, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:72252453..72252458,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p@chr8:72252453..72252458, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:79379348..79379360,+#_e0ce0ba2fd765c2f968093cdb36d51b4 | p1@PCA3 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:38976407..38976413,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p20@KRT10 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:110964453..110964459,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p16@CDK19 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:59672718..59672753,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p@chr5:59672718..59672753, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:38975820..38975830,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p10@KRT10 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:72252453..72252458,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p@chr8:72252453..72252458, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:38976407..38976413,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p20@KRT10 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr15:45803320..45803343,+#_e0ce0ba2fd765c2f968093cdb36d51b4 | p1@HMGN2P46 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:38975820..38975830,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p10@KRT10 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr16:15811123..15811133,+#_e0ce0ba2fd765c2f968093cdb36d51b4 | p@chr16:15811123..15811133, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:110964453..110964459,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p16@CDK19 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:79379348..79379360,+#_e0ce0ba2fd765c2f968093cdb36d51b4 | p1@PCA3 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr15:45803320..45803343,+#_e0ce0ba2fd765c2f968093cdb36d51b4 | p1@HMGN2P46 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr16:15811123..15811133,+#_e0ce0ba2fd765c2f968093cdb36d51b4 | p@chr16:15811123..15811133, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:59672718..59672753,-#_e0ce0ba2fd765c2f968093cdb36d51b4 | p@chr5:59672718..59672753, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:53068552..53068579,-#_6de9fca5e941a7ea619eb7373f70bbf1 | p@chr12:53068552..53068579, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr14:74454889..74454892,-#_6de9fca5e941a7ea619eb7373f70bbf1 | p10@ENTPD5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:53068552..53068579,-#_6de9fca5e941a7ea619eb7373f70bbf1 | p@chr12:53068552..53068579, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr14:74454889..74454892,-#_6de9fca5e941a7ea619eb7373f70bbf1 | p10@ENTPD5 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:209545365..209545377,+#_4c886860569e24ea3def11291d5e3098 | p1@ENST00000447257 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:209545365..209545377,+#_4c886860569e24ea3def11291d5e3098 | p1@ENST00000447257 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:152585338..152585342,-#_4c886860569e24ea3def11291d5e3098 | p@chr6:152585338..152585342, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:33640639..33640650,+#_4c886860569e24ea3def11291d5e3098 | p@chr17:33640639..33640650, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:38664309..38664322,+#_4c886860569e24ea3def11291d5e3098 | p@chr19:38664309..38664322, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179399981..179399988,-#_4c886860569e24ea3def11291d5e3098 | p@chr2:179399981..179399988, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38975796..38975805,-#_4c886860569e24ea3def11291d5e3098 | p13@KRT10 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:38664309..38664322,+#_4c886860569e24ea3def11291d5e3098 | p@chr19:38664309..38664322, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179393635..179393640,-#_4c886860569e24ea3def11291d5e3098 | p167@TTN |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:186434325..186434339,-#_4c886860569e24ea3def11291d5e3098 | p@chr4:186434325..186434339, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179399981..179399988,-#_4c886860569e24ea3def11291d5e3098 | p@chr2:179399981..179399988, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38975796..38975805,-#_4c886860569e24ea3def11291d5e3098 | p13@KRT10 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38976909..38976919,-#_4c886860569e24ea3def11291d5e3098 | p@chr17:38976909..38976919, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179393635..179393640,-#_4c886860569e24ea3def11291d5e3098 | p167@TTN |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38976909..38976919,-#_4c886860569e24ea3def11291d5e3098 | p@chr17:38976909..38976919, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:152585338..152585342,-#_4c886860569e24ea3def11291d5e3098 | p@chr6:152585338..152585342, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38975850..38975854,-#_4c886860569e24ea3def11291d5e3098 | p19@KRT10 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38978526..38978535,+#_4c886860569e24ea3def11291d5e3098 | p@chr17:38978526..38978535, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38975850..38975854,-#_4c886860569e24ea3def11291d5e3098 | p19@KRT10 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38978526..38978535,+#_4c886860569e24ea3def11291d5e3098 | p@chr17:38978526..38978535, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:61416169..61416181,-#_4c886860569e24ea3def11291d5e3098 | p@chr1:61416169..61416181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:61416169..61416181,-#_4c886860569e24ea3def11291d5e3098 | p@chr1:61416169..61416181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:51517928..51517936,-#_4c886860569e24ea3def11291d5e3098 | p2@AK026045 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:51517928..51517936,-#_4c886860569e24ea3def11291d5e3098 | p2@AK026045 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:33640639..33640650,+#_4c886860569e24ea3def11291d5e3098 | p@chr17:33640639..33640650, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:186434325..186434339,-#_4c886860569e24ea3def11291d5e3098 | p@chr4:186434325..186434339, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:94301107..94301111,-#_850d745f552df24b6a34c98cb5ceae2a | p18@IDE |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152520302..152520308,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:152520302..152520308, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr16:34571309..34571314,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr16:34571309..34571314, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152520333..152520340,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:152520333..152520340, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152548420..152548425,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:152548420..152548425, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:75869014..75869047,+#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:75869014..75869047, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:52875783..52875812,-#_850d745f552df24b6a34c98cb5ceae2a | p7@TMEM110 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152520333..152520340,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:152520333..152520340, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152548420..152548425,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:152548420..152548425, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:75869014..75869047,+#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:75869014..75869047, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr16:34571309..34571314,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr16:34571309..34571314, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:52875783..52875812,-#_850d745f552df24b6a34c98cb5ceae2a | p7@TMEM110 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:66771311..66771320,-#_850d745f552df24b6a34c98cb5ceae2a | p2@ENST00000508512 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:179542558..179542568,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:179542558..179542568, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:103555720..103555725,+#_850d745f552df24b6a34c98cb5ceae2a | p@chr13:103555720..103555725, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:179542558..179542568,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:179542558..179542568, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:103555720..103555725,+#_850d745f552df24b6a34c98cb5ceae2a | p@chr13:103555720..103555725, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:66771311..66771320,-#_850d745f552df24b6a34c98cb5ceae2a | p2@ENST00000508512 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:94301107..94301111,-#_850d745f552df24b6a34c98cb5ceae2a | p18@IDE |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152520302..152520308,-#_850d745f552df24b6a34c98cb5ceae2a | p@chr2:152520302..152520308, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:4448859..4448864,-#_ec666ebe896635405faa5a69db98388a | p@chr17:4448859..4448864, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:4448859..4448864,-#_ec666ebe896635405faa5a69db98388a | p@chr17:4448859..4448864, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr2:178753478..178753487,-#_ec666ebe896635405faa5a69db98388a | p10@PDE11A |
| 1.46e-50 | FFCP PHASE2:Hg19::chr2:178753478..178753487,-#_ec666ebe896635405faa5a69db98388a | p10@PDE11A |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:15646574..15646578,-#_1cc57ff685b34a61ded2eade21757b92 | p11@ITGA8 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:152554090..152554096,-#_1cc57ff685b34a61ded2eade21757b92 | p@chr2:152554090..152554096, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:71351909..71351911,+#_1cc57ff685b34a61ded2eade21757b92 | p@chr10:71351909..71351911, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr16:56598984..56598990,+#_1cc57ff685b34a61ded2eade21757b92 | p1@MT4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr17:10421962..10421969,-#_1cc57ff685b34a61ded2eade21757b92 | p2@MYH1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr17:10421962..10421969,-#_1cc57ff685b34a61ded2eade21757b92 | p2@MYH1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:71351909..71351911,+#_1cc57ff685b34a61ded2eade21757b92 | p@chr10:71351909..71351911, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:170783857..170783860,+#_1cc57ff685b34a61ded2eade21757b92 | p@chr2:170783857..170783860, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:170783857..170783860,+#_1cc57ff685b34a61ded2eade21757b92 | p@chr2:170783857..170783860, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr20:33451327..33451358,-#_1cc57ff685b34a61ded2eade21757b92 | p4@GGT7 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr16:56598984..56598990,+#_1cc57ff685b34a61ded2eade21757b92 | p1@MT4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr20:33451327..33451358,-#_1cc57ff685b34a61ded2eade21757b92 | p4@GGT7 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:15646574..15646578,-#_1cc57ff685b34a61ded2eade21757b92 | p11@ITGA8 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:152554090..152554096,-#_1cc57ff685b34a61ded2eade21757b92 | p@chr2:152554090..152554096, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:2744431..2744440,-#_73b48801f5a2f23e775834f0257abf14 | p@chr6:2744431..2744440, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:56362490..56362515,-#_73b48801f5a2f23e775834f0257abf14 | p60@DST |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:179399074..179399079,-#_73b48801f5a2f23e775834f0257abf14 | p@chr2:179399074..179399079, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:66771335..66771342,-#_73b48801f5a2f23e775834f0257abf14 | p3@ENST00000508512 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_73b48801f5a2f23e775834f0257abf14 | p@chr17:38976882..38976895, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr16:15865517..15865522,-#_73b48801f5a2f23e775834f0257abf14 | p@chr16:15865517..15865522, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:66771414..66771419,-#_73b48801f5a2f23e775834f0257abf14 | p2@ENST00000515184 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:152393727..152393736,-#_73b48801f5a2f23e775834f0257abf14 | p@chr2:152393727..152393736, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_73b48801f5a2f23e775834f0257abf14 | p@chr17:38976882..38976895, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:152393727..152393736,-#_73b48801f5a2f23e775834f0257abf14 | p@chr2:152393727..152393736, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:152348920..152348927,-#_73b48801f5a2f23e775834f0257abf14 | p@chr2:152348920..152348927, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:179454661..179454668,-#_73b48801f5a2f23e775834f0257abf14 | p@chr2:179454661..179454668, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
