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Latest revision as of 13:43, 27 June 2012

Name:neonate stage
Definition:"Of or pertaining to the period of time immediately following birth, or to the newborn." Wikipedia:Infant
Xrefs:
links:

BTO:0001762
EV:0300037
NIF_Organism:birnlex_695

OGES:000025
Synonyms: "fledgling stage" NARROW SENSU [UBERON:cjm]
"hatchling" NARROW SENSU [UBERON:cjm]
"hatchling stage" NARROW SENSU [UBERON:cjm]
"infant stage" NARROW SENSU [UBERON:cjm]
"neonatal stage" EXACT [OBOL:automatic]
"nestling stage" NARROW SENSU [UBERON:cjm]
"newborn stage" RELATED [UBERON:cjm]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000105(life cycle stage)
part_of:UBERON:0000112(juvenile stage)



Children

is a:FF:10352-105E1 (medial frontal gyrus, newborn, donor10223),FF:10353-105E2 (medial temporal gyrus, newborn, donor10223),FF:10354-105E3 (caudate nucleus, newborn, donor10223),FF:10355-105E4 (occipital cortex, newborn, donor10223),FF:10356-105E5 (parietal lobe, newborn, donor10223),FF:10357-105E6 (cerebellum, newborn, donor10223),FF:10358-105E7 (substantia nigra, newborn, donor10223),FF:10359-105E8 (spinal cord, newborn, donor10223),FF:10360-105E9 (amygdala, newborn, donor10223),FF:10361-105F1 (medulla oblongata, newborn, donor10223),FF:10362-105F2 (locus coeruleus, newborn, donor10223),FF:10363-105F3 (hippocampus, newborn, donor10223),FF:10364-105F4 (globus pallidus, newborn, donor10223),FF:10365-105F5 (putamen, newborn, donor10223),FF:10366-105F6 (thalamus, newborn, donor10223)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007221 (neonate stage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results