UBERON:0006876: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000062 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | vasculature of organ | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"organ vasculature" EXACT [FMA:74612] "set of blood vessels of organ" EXACT [FMA:74612] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002049(vasculature) |
|---|---|
| part_of: | UBERON:0000062(organ) |
Children
| is a: | UBERON:0001886 (choroid plexus),UBERON:0002203 (vasculature of eye),UBERON:0005284 (brain vasculature),UBERON:0006877 (vasculature of liver),UBERON:0007303 (pharyngeal vasculature) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10296-104G8
- 10324-105A9
- 11234-116D1 (Smooth Muscle Cells - Brain Vascular, donor1)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11315-117D1 (Smooth Muscle Cells - Brain Vascular, donor2)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11391-118C5 (Smooth Muscle Cells - Brain Vascular, donor3)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11492-119E7 (Fibroblast - Choroid Plexus, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006876 (vasculature of organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.29e-58 | FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_8cca85e1f7eb367b3303f2fadc1106f9 | p30@PRKCH |
| 1.29e-58 | FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_8cca85e1f7eb367b3303f2fadc1106f9 | p30@PRKCH |
| 1.55e-57 | FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_370205553b8a328c2bce57a2009e3d07 | p@chrX:106198807..106198826, - |
| 1.55e-57 | FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_370205553b8a328c2bce57a2009e3d07 | p@chrX:106198807..106198826, - |
| 2.54e-48 | FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_6cec42a32855c91e9f0e7f8c0ca05856 | p33@PRKCH |
| 2.54e-48 | FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_6cec42a32855c91e9f0e7f8c0ca05856 | p33@PRKCH |
| 1.65e-41 | FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_113bb3d1bbddfcb361820c873c70d786 | p1@BC033145 |
| 1.65e-41 | FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_113bb3d1bbddfcb361820c873c70d786 | p1@BC033145 |
| 4.07e-41 | FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_657cb1cc0e1a541f1050e93929248656 | p@chr7:115723897..115723915, - |
| 4.07e-41 | FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_657cb1cc0e1a541f1050e93929248656 | p@chr7:115723897..115723915, - |
| 5.35e-41 | FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_8614068d96d82aa0481006dd0aab76a9 | p@chr12:97856211..97856221, + |
| 5.35e-41 | FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_8614068d96d82aa0481006dd0aab76a9 | p@chr12:97856211..97856221, + |
| 8.72e-40 | FFCP PHASE2:Hg19::chr3:147127358..147127369,+#_9caac00f5f9a2bcc1ab163f33f053d32 | p16@ZIC1 |
| 8.72e-40 | FFCP PHASE1:Hg19::chr3:147127358..147127369,+#_9caac00f5f9a2bcc1ab163f33f053d32 | p16@ZIC1 |
| 6.8e-37 | FFCP PHASE1:Hg19::chr1:201708474..201708479,+#_483a3e63179c681e74e656368288cdcc | p58@NAV1 |
| 6.8e-37 | FFCP PHASE1:Hg19::chr1:201708485..201708494,+#_483a3e63179c681e74e656368288cdcc | p55@NAV1 |
| 6.8e-37 | FFCP PHASE2:Hg19::chr1:201708474..201708479,+#_483a3e63179c681e74e656368288cdcc | p58@NAV1 |
| 6.8e-37 | FFCP PHASE2:Hg19::chr1:201708485..201708494,+#_483a3e63179c681e74e656368288cdcc | p55@NAV1 |
| 1.71e-34 | FFCP PHASE1:Hg19::chr3:147127961..147127972,+#_91ad7f00561b5e53d8842fb4d411bc1e | p3@AB464362 |
| 1.71e-34 | FFCP PHASE2:Hg19::chr3:147127961..147127972,+#_91ad7f00561b5e53d8842fb4d411bc1e | p3@AB464362 |
| 3.85e-33 | FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_a9d82ed336ddf63d2c5037248e5f77b4 | p@chr7:115723925..115723935, - |
| 3.85e-33 | FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_a9d82ed336ddf63d2c5037248e5f77b4 | p@chr7:115723925..115723935, - |
| 4.29e-33 | FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_4710871046aaf8602be3862354772e7c | p@chr2:35680607..35680613, - |
| 4.29e-33 | FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_4710871046aaf8602be3862354772e7c | p@chr2:35680607..35680613, - |
| 5.35e-33 | FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_3f087deb35c88a0a7995d085e9b7f9c2 | p5@SFRP1 |
| 5.35e-33 | FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_3f087deb35c88a0a7995d085e9b7f9c2 | p5@SFRP1 |
| 5.35e-33 | FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_3f087deb35c88a0a7995d085e9b7f9c2 | p@chr13:36052762..36052767, - |
| 5.35e-33 | FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_3f087deb35c88a0a7995d085e9b7f9c2 | p@chr13:36052762..36052767, - |
| 5.96e-33 | FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_bd6f32895776c600fbf7ac5ab082cff4 | p@chr7:131803806..131803815, + |
| 5.96e-33 | FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_bd6f32895776c600fbf7ac5ab082cff4 | p@chr7:131803806..131803815, + |
| 7.42e-33 | FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_acb76a74eb143dbe983d87cbac1e4b82 | p@chr16:58896129..58896134, - |
| 7.42e-33 | FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_acb76a74eb143dbe983d87cbac1e4b82 | p@chr16:58896129..58896134, - |
| 1.06e-32 | FFCP PHASE2:Hg19::chr22:31536360..31536389,-#_1ba3f9432fc4ab77c029c17d92462bc1 | p4@PLA2G3 |
| 1.06e-32 | FFCP PHASE1:Hg19::chr22:31536360..31536389,-#_1ba3f9432fc4ab77c029c17d92462bc1 | p4@PLA2G3 |
| 6.78e-32 | FFCP PHASE1:Hg19::chr3:147139152..147139163,+#_88499281df380f466781fb3fd2d09644 | p15@ZIC1 |
| 6.78e-32 | FFCP PHASE2:Hg19::chr3:147139152..147139163,+#_88499281df380f466781fb3fd2d09644 | p15@ZIC1 |
| 1.21e-30 | FFCP PHASE2:Hg19::chr3:147127489..147127503,+#_6482a56ee8661a1785f7591d55ade8fd | p11@ZIC1 |
| 1.21e-30 | FFCP PHASE1:Hg19::chr3:147127489..147127503,+#_6482a56ee8661a1785f7591d55ade8fd | p11@ZIC1 |
| 2.94e-29 | FFCP PHASE1:Hg19::chr5:31235359..31235362,+#_c224665483fb464df71ee5926bde8f58 | p@chr5:31235359..31235362, + |
| 2.94e-29 | FFCP PHASE2:Hg19::chr5:31235359..31235362,+#_c224665483fb464df71ee5926bde8f58 | p@chr5:31235359..31235362, + |
| 4.89e-29 | FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_434ec168ce14fe1a3351e1716c1dab11 | p1@CLRN1 |
| 4.89e-29 | FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_434ec168ce14fe1a3351e1716c1dab11 | p1@CLRN1 |
| 7.02e-29 | FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_e8276a959a00be075d8ce4f603512af0 | p@chr8:124692287..124692298, + |
| 7.02e-29 | FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_e8276a959a00be075d8ce4f603512af0 | p@chr8:124692287..124692298, + |
| 1.17e-27 | FFCP PHASE2:Hg19::chr8:128902571..128902583,+#_3f8e29276594b2d15af817f74d2220db | p15@PVT1 |
| 1.17e-27 | FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_3f8e29276594b2d15af817f74d2220db | p2@RIPPLY1 |
| 1.17e-27 | FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_3f8e29276594b2d15af817f74d2220db | p@chr3:146517344..146517356, + |
| 1.17e-27 | FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_3f8e29276594b2d15af817f74d2220db | p2@RIPPLY1 |
| 1.17e-27 | FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_3f8e29276594b2d15af817f74d2220db | p@chr3:146517344..146517356, + |
| 1.17e-27 | FFCP PHASE1:Hg19::chr8:128902571..128902583,+#_3f8e29276594b2d15af817f74d2220db | p15@PVT1 |
| 1.57e-26 | FFCP PHASE2:Hg19::chr6:72970377..72970387,+#_09325b238fa852d4a839a748ea110e7e | p20@RIMS1 |
| 1.57e-26 | FFCP PHASE1:Hg19::chr6:72970377..72970387,+#_09325b238fa852d4a839a748ea110e7e | p20@RIMS1 |
| 1.68e-26 | FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_3ab1889c38c30e07ed2154e17ac5d079 | p@chr14:87636652..87636657, - |
| 1.68e-26 | FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_3ab1889c38c30e07ed2154e17ac5d079 | p@chr14:87636652..87636657, - |
| 4.03e-26 | FFCP PHASE1:Hg19::chr17:1013251..1013277,-#_2ccf4af1f648c647466d9bce532bba90 | p@chr17:1013251..1013277, - |
| 4.03e-26 | FFCP PHASE2:Hg19::chr17:1013251..1013277,-#_2ccf4af1f648c647466d9bce532bba90 | p@chr17:1013251..1013277, - |
| 1.03e-25 | FFCP PHASE2:Hg19::chr3:147114260..147114290,-#_3887e7b96d6a01451ff6bc4a71773862 | p3@ZIC4 |
| 1.03e-25 | FFCP PHASE1:Hg19::chr3:147114260..147114290,-#_3887e7b96d6a01451ff6bc4a71773862 | p3@ZIC4 |
| 2.79e-25 | FFCP PHASE1:Hg19::chr3:147111317..147111328,+#_cde53bc7a28e0e2fe923e99261c199b6 | p8@ZIC1 |
| 2.79e-25 | FFCP PHASE2:Hg19::chr3:147111317..147111328,+#_cde53bc7a28e0e2fe923e99261c199b6 | p8@ZIC1 |
| 4.86e-25 | FFCP PHASE2:Hg19::chr5:78112479..78112482,+#_6917a10242145a89a858e9597836b2a6 | p@chr5:78112479..78112482, + |
| 4.86e-25 | FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_6917a10242145a89a858e9597836b2a6 | p@chr2:210798666..210798677, + |
| 4.86e-25 | FFCP PHASE1:Hg19::chr5:78112479..78112482,+#_6917a10242145a89a858e9597836b2a6 | p@chr5:78112479..78112482, + |
| 4.86e-25 | FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_6917a10242145a89a858e9597836b2a6 | p@chr2:210798666..210798677, + |
| 5.49e-25 | FFCP PHASE1:Hg19::chr8:24997361..24997368,-#_86be858d31ab83a07d493d3bcf4f91b3 | p@chr8:24997361..24997368, - |
| 5.49e-25 | FFCP PHASE2:Hg19::chr8:24997361..24997368,-#_86be858d31ab83a07d493d3bcf4f91b3 | p@chr8:24997361..24997368, - |
| 6.2e-25 | FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_dbee932af6d9698ec345a30f3cd23c9e | p@chr13:36052713..36052724, - |
| 6.2e-25 | FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_dbee932af6d9698ec345a30f3cd23c9e | p@chr13:36052713..36052724, - |
| 6.52e-25 | FFCP PHASE1:Hg19::chr11:8832119..8832124,-#_971577c1fc7ac220186b94e4418829ff | p30@ST5 |
| 6.52e-25 | FFCP PHASE2:Hg19::chr11:8832119..8832124,-#_971577c1fc7ac220186b94e4418829ff | p30@ST5 |
| 1.05e-24 | FFCP PHASE2:Hg19::chr3:147129944..147129959,+#_fef5583de498983275aa710a32becbb3 | p@chr3:147129944..147129959, + |
| 1.05e-24 | FFCP PHASE1:Hg19::chr17:1013333..1013374,-#_fef5583de498983275aa710a32becbb3 | p@chr17:1013333..1013374, - |
| 1.05e-24 | FFCP PHASE1:Hg19::chr3:147129944..147129959,+#_fef5583de498983275aa710a32becbb3 | p@chr3:147129944..147129959, + |
| 1.05e-24 | FFCP PHASE2:Hg19::chr17:1013333..1013374,-#_fef5583de498983275aa710a32becbb3 | p@chr17:1013333..1013374, - |
| 1.19e-24 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_8561f33a16b91b261a1a5b609d11bd82 | p7@PTPRU |
| 1.19e-24 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_8561f33a16b91b261a1a5b609d11bd82 | p7@PTPRU |
| 1.87e-24 | FFCP PHASE1:Hg19::chr3:147127904..147127942,+#_f19f0ad22fdbd3e3c76c699f0d35b3f6 | p1@AB464362 |
| 1.87e-24 | FFCP PHASE2:Hg19::chr3:147127904..147127942,+#_f19f0ad22fdbd3e3c76c699f0d35b3f6 | p1@AB464362 |
| 2.22e-24 | FFCP PHASE1:Hg19::chr3:147124307..147124336,-#_79ccccd1c5523fca2fce615ae6b3837f | p2@ZIC4 |
| 2.22e-24 | FFCP PHASE2:Hg19::chr3:147124307..147124336,-#_79ccccd1c5523fca2fce615ae6b3837f | p2@ZIC4 |
| 4.0e-24 | FFCP PHASE1:Hg19::chr3:8536114..8536125,-#_28aed36fa12279df37860b97ced25592 | p@chr3:8536114..8536125, - |
| 4.0e-24 | FFCP PHASE2:Hg19::chr3:8536114..8536125,-#_28aed36fa12279df37860b97ced25592 | p@chr3:8536114..8536125, - |
| 5.64e-24 | FFCP PHASE1:Hg19::chr11:89224564..89224574,-#_b2accde950b409d29eca92f6cc50eccf | p8@NOX4 |
| 5.64e-24 | FFCP PHASE2:Hg19::chr11:89224564..89224574,-#_b2accde950b409d29eca92f6cc50eccf | p8@NOX4 |
| 6.11e-24 | FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_a6fe179dcab0d187d22499834091c913 | p1@ENST00000526061 |
| 6.11e-24 | FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_a6fe179dcab0d187d22499834091c913 | p1@ENST00000526061 |
| 7.08e-24 | FFCP PHASE1:Hg19::chr3:147131157..147131175,+#_e831ffa2a862070f46646bf0f189408e | p@chr3:147131157..147131175, + |
| 7.08e-24 | FFCP PHASE2:Hg19::chr3:147131157..147131175,+#_e831ffa2a862070f46646bf0f189408e | p@chr3:147131157..147131175, + |
| 7.72e-24 | FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_26016d301accfe96f4d18e2c53d8ec82 | p@chr10:91294399..91294401, - |
| 7.72e-24 | FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_26016d301accfe96f4d18e2c53d8ec82 | p@chr10:91294399..91294401, - |
| 8.19e-24 | FFCP PHASE1:Hg19::chr3:147131841..147131863,+#_41a27521e4af694feb0f9248859c5202 | p@chr3:147131841..147131863, + |
| 8.19e-24 | FFCP PHASE2:Hg19::chr3:147131841..147131863,+#_41a27521e4af694feb0f9248859c5202 | p@chr3:147131841..147131863, + |
| 9.75e-24 | FFCP PHASE1:Hg19::chr7:43417422..43417435,+#_50c32263af384f157fa0b4262d09592e | p16@HECW1 |
| 9.75e-24 | FFCP PHASE2:Hg19::chr7:43417422..43417435,+#_50c32263af384f157fa0b4262d09592e | p16@HECW1 |
| 1.82e-23 | FFCP PHASE1:Hg19::chr3:147111285..147111298,+#_4af31eee167f8ccc23ebbf769d2a7664 | p10@ZIC1 |
| 1.82e-23 | FFCP PHASE2:Hg19::chr3:147111285..147111298,+#_4af31eee167f8ccc23ebbf769d2a7664 | p10@ZIC1 |
| 8.59e-23 | FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_42bd0c19abc1a2df92c56bcd731b2e2a | p@chr2:66670833..66670853, + |
| 8.59e-23 | FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_42bd0c19abc1a2df92c56bcd731b2e2a | p@chr2:66670833..66670853, + |
| 1.08e-22 | FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_8554cc8d6d77f9a3aa65ad1c6d732dc2 | p1@OPTC |
| 1.08e-22 | FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_8554cc8d6d77f9a3aa65ad1c6d732dc2 | p1@OPTC |
