UBERON:0006553: Difference between revisions
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0002113 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | renal duct | ||
|---|---|---|---|
| Definition: | "A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9] | ||
| Xrefs: |
| ||
| Comments: | in ZFA this is defined as part of mesonephros |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | UBERON:0009201 (nephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_9b3409e528ac533dfd8475c41e23287d | p@chr1:155697874..155697885, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_9b3409e528ac533dfd8475c41e23287d | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_9b3409e528ac533dfd8475c41e23287d | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379486..31379501, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19062951..19062955, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_9b3409e528ac533dfd8475c41e23287d | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_9b3409e528ac533dfd8475c41e23287d | p@chr16:28323634..28323657, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_9b3409e528ac533dfd8475c41e23287d | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:56772735..56772741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_9b3409e528ac533dfd8475c41e23287d | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_9b3409e528ac533dfd8475c41e23287d | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_9b3409e528ac533dfd8475c41e23287d | p@chr12:114385720..114385732, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:20219008..20219045, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:50280152..50280179, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379454..31379466, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_9b3409e528ac533dfd8475c41e23287d | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:168436322..168436326,-#_9b3409e528ac533dfd8475c41e23287d | p@chr1:168436322..168436326, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_9b3409e528ac533dfd8475c41e23287d | p7@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378927..21378932, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_9b3409e528ac533dfd8475c41e23287d | p4@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_9b3409e528ac533dfd8475c41e23287d | p5@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_9b3409e528ac533dfd8475c41e23287d | p5@Med24 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958855..101958871, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:75798157..75798162, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89597660..89597668, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_9b3409e528ac533dfd8475c41e23287d | p2@Defb23 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35657557..35657582,-#_9b3409e528ac533dfd8475c41e23287d | p2@Gm3428 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:63779573..63779582, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164464249..164464258,-#_9b3409e528ac533dfd8475c41e23287d | p@chr2:164464249..164464258, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_9b3409e528ac533dfd8475c41e23287d | p4@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:20817297..20817313, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:20419453..20419476, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:156048695..156048707, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_9b3409e528ac533dfd8475c41e23287d | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_9b3409e528ac533dfd8475c41e23287d | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_9b3409e528ac533dfd8475c41e23287d | p@chr10:91753336..91753348, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_9b3409e528ac533dfd8475c41e23287d | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:63611201..63611210, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21381777..21381789, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_9b3409e528ac533dfd8475c41e23287d | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752183..25752203,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:25752183..25752203, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_9b3409e528ac533dfd8475c41e23287d | p@chr12:104945515..104945524, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_9b3409e528ac533dfd8475c41e23287d | p19@Clu |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_9b3409e528ac533dfd8475c41e23287d | p2@ENSMUST00000152401 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:61976287..61976297,-#_9b3409e528ac533dfd8475c41e23287d | p@chr10:61976287..61976297, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87936213..87936218, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_9b3409e528ac533dfd8475c41e23287d | p@chr1:155722142..155722175, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:167480413..167480463,-#_9b3409e528ac533dfd8475c41e23287d | p@chr2:167480413..167480463, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_9b3409e528ac533dfd8475c41e23287d | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_9b3409e528ac533dfd8475c41e23287d | p4@Atp4a |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:54678983..54678995, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_9b3409e528ac533dfd8475c41e23287d | p@chr18:44319583..44319592, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:36016859..36016897, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_9b3409e528ac533dfd8475c41e23287d | p2@Gm6040, p2@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_9b3409e528ac533dfd8475c41e23287d | p@chr4:33600466..33600491, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21385729..21385768, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_9b3409e528ac533dfd8475c41e23287d | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103746280..103746298,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:103746280..103746298, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280152..50280179,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:50280152..50280179, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379878..31379883,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379878..31379883, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21385325..21385329, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845349..59845371,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_9b3409e528ac533dfd8475c41e23287d | p@chr9:70761885..70761895, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:75559819..75559830,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:75559819..75559830, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_9b3409e528ac533dfd8475c41e23287d | p1@Defb44-ps |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379107..21379136,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379107..21379136, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141447..19141469, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89597725..89597743, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:110773580..110773589, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_9b3409e528ac533dfd8475c41e23287d | p2@ENSMUST00000152401 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_9b3409e528ac533dfd8475c41e23287d | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:160573108..160573123, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959194..101959224,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101959194..101959224, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155707..90155720, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:72756032..72756041, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164479326..164479336,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:164479326..164479336, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_9b3409e528ac533dfd8475c41e23287d | p3@Gm3428 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51670340..51670346,-#_9b3409e528ac533dfd8475c41e23287d | p@chr14:51670340..51670346, - |
