CL:0002601: Difference between revisions
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|obo_creation_date=2011-03-06T05:53:28Z | |obo_creation_date=2011-03-06T05:53:28Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:28, 26 June 2012
| Name: | uterine smooth muscle cell |
|---|---|
| Namespace: | cell |
| Definition: | "A smooth muscle cell of the uterus." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:53:28Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000192(smooth muscle cell) |
|---|
Children
| derives from: | FF:0000185 (human uterine smooth muscle cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11466-119B8 (Smooth Muscle Cells - Uterine, donor3)
- 11630-122C1
Mouse (Mus musculus)
- 11258-116F7 (Smooth Muscle Cells - Uterine, donor1)
- 11466-119B8 (Smooth Muscle Cells - Uterine, donor3)
- 11630-122C1
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002601 (uterine smooth muscle cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:95005495..95005497,-#_0ddbd3e971061e2fc2979d367b0670c1 | p14@IARS |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:95005495..95005497,-#_0ddbd3e971061e2fc2979d367b0670c1 | p14@IARS |
| 2.55e-98 | FFCP PHASE2:Hg19::chr4:44873786..44873795,+#_0ddbd3e971061e2fc2979d367b0670c1 | p@chr4:44873786..44873795, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr4:44873786..44873795,+#_0ddbd3e971061e2fc2979d367b0670c1 | p@chr4:44873786..44873795, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:23177297..23177304,-#_0ddbd3e971061e2fc2979d367b0670c1 | p2@ENST00000420572 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:23177297..23177304,-#_0ddbd3e971061e2fc2979d367b0670c1 | p2@ENST00000420572 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr10:69896459..69896470,+#_8496b8b847481c64cd212c08669226cd | p@chr10:69896459..69896470, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr10:69896459..69896470,+#_8496b8b847481c64cd212c08669226cd | p@chr10:69896459..69896470, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr15:40702995..40703001,+#_ddde0d764ee5a43558571370c694a084 | p5@IVD |
| 6.58e-50 | FFCP PHASE2:Hg19::chr4:891819..891820,-#_ddde0d764ee5a43558571370c694a084 | p@chr4:891819..891820, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr15:40702995..40703001,+#_ddde0d764ee5a43558571370c694a084 | p5@IVD |
| 6.58e-50 | FFCP PHASE1:Hg19::chr4:891819..891820,-#_ddde0d764ee5a43558571370c694a084 | p@chr4:891819..891820, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr12:52099406..52099409,+#_703934d4f63c8ebe96051aa2fef9f159 | p@chr12:52099406..52099409, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr7:99951104..99951109,+#_703934d4f63c8ebe96051aa2fef9f159 | p5@PILRB |
| 1.48e-40 | FFCP PHASE1:Hg19::chr7:99951104..99951109,+#_703934d4f63c8ebe96051aa2fef9f159 | p5@PILRB |
| 1.48e-40 | FFCP PHASE2:Hg19::chr12:52099406..52099409,+#_703934d4f63c8ebe96051aa2fef9f159 | p@chr12:52099406..52099409, + |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:86612112..86612123,+#_0e468a0cf4f87c6470f848b4d25ad9b6 | p5@FOXL1 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:86612112..86612123,+#_0e468a0cf4f87c6470f848b4d25ad9b6 | p5@FOXL1 |
| 3.3e-40 | FFCP PHASE2:Hg19::chr3:108160535..108160548,-#_23db0ab48b7f5e66f8e27be68e755c53 | p@chr3:108160535..108160548, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:104296243..104296258,+#_23db0ab48b7f5e66f8e27be68e755c53 | p15@RNF20 |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:104296243..104296258,+#_23db0ab48b7f5e66f8e27be68e755c53 | p15@RNF20 |
| 3.3e-40 | FFCP PHASE1:Hg19::chr3:108160535..108160548,-#_23db0ab48b7f5e66f8e27be68e755c53 | p@chr3:108160535..108160548, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:43341736..43341745,+#_2b4f8c93c42ee8d2934333136fdba67c | p@chr4:43341736..43341745, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:43341736..43341745,+#_2b4f8c93c42ee8d2934333136fdba67c | p@chr4:43341736..43341745, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr18:61445190..61445203,+#_1e29f44c9adef78271951d99799de975 | p11@SERPINB7 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr1:36603393..36603397,-#_1e29f44c9adef78271951d99799de975 | p@chr1:36603393..36603397, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr18:61445190..61445203,+#_1e29f44c9adef78271951d99799de975 | p11@SERPINB7 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr1:36603393..36603397,-#_1e29f44c9adef78271951d99799de975 | p@chr1:36603393..36603397, - |
| 4.2e-29 | FFCP PHASE2:Hg19::chr3:141150971..141150978,+#_445228ff3b48836cc953372e3cd79768 | p60@ZBTB38 |
| 4.2e-29 | FFCP PHASE1:Hg19::chr3:141150971..141150978,+#_445228ff3b48836cc953372e3cd79768 | p60@ZBTB38 |
| 4.61e-26 | FFCP PHASE2:Hg19::chr16:87400976..87400979,-#_7f578fe49aad9decb29dd9d92cac44db | p@chr16:87400976..87400979, - |
| 4.61e-26 | FFCP PHASE2:Hg19::chr12:114385135..114385139,-#_7f578fe49aad9decb29dd9d92cac44db | p@chr12:114385135..114385139, - |
| 4.61e-26 | FFCP PHASE1:Hg19::chr16:87400976..87400979,-#_7f578fe49aad9decb29dd9d92cac44db | p@chr16:87400976..87400979, - |
| 4.61e-26 | FFCP PHASE1:Hg19::chr12:114385135..114385139,-#_7f578fe49aad9decb29dd9d92cac44db | p@chr12:114385135..114385139, - |
| 5.93e-26 | FFCP PHASE1:Hg19::chr9:139282891..139282896,-#_ffda0e992824bf5d304bd3832b15f49a | p@chr9:139282891..139282896, - |
| 5.93e-26 | FFCP PHASE2:Hg19::chr9:139282891..139282896,-#_ffda0e992824bf5d304bd3832b15f49a | p@chr9:139282891..139282896, - |
| 9.79e-26 | FFCP PHASE1:Hg19::chr14:54910759..54910764,+#_490bb211cffde7f6fb23243fa1373b54 | p@chr14:54910759..54910764, + |
| 9.79e-26 | FFCP PHASE2:Hg19::chr20:4229240..4229260,-#_490bb211cffde7f6fb23243fa1373b54 | p2@ADRA1D |
| 9.79e-26 | FFCP PHASE1:Hg19::chr20:4229240..4229260,-#_490bb211cffde7f6fb23243fa1373b54 | p2@ADRA1D |
| 9.79e-26 | FFCP PHASE2:Hg19::chr14:54910759..54910764,+#_490bb211cffde7f6fb23243fa1373b54 | p@chr14:54910759..54910764, + |
| 1.26e-25 | FFCP PHASE1:Hg19::chr2:220386017..220386029,+#_6fe186bc39b81872ab3313af36831020 | p@chr2:220386017..220386029, + |
| 1.26e-25 | FFCP PHASE2:Hg19::chr7:73106975..73106980,+#_6fe186bc39b81872ab3313af36831020 | p@chr7:73106975..73106980, + |
| 1.26e-25 | FFCP PHASE1:Hg19::chr7:73106975..73106980,+#_6fe186bc39b81872ab3313af36831020 | p@chr7:73106975..73106980, + |
| 1.26e-25 | FFCP PHASE2:Hg19::chr2:220386017..220386029,+#_6fe186bc39b81872ab3313af36831020 | p@chr2:220386017..220386029, + |
| 1.07e-23 | FFCP PHASE2:Hg19::chr4:43341753..43341762,+#_b9a0d7f720ecdf9695438e1ef1192d9d | p@chr4:43341753..43341762, + |
| 1.07e-23 | FFCP PHASE1:Hg19::chr4:43341753..43341762,+#_b9a0d7f720ecdf9695438e1ef1192d9d | p@chr4:43341753..43341762, + |
| 5.13e-23 | FFCP PHASE1:Hg19::chr12:22093912..22093927,-#_92f73ff0d9cbbc6b26f49160d8550b9c | p@chr12:22093912..22093927, - |
| 5.13e-23 | FFCP PHASE2:Hg19::chr12:22093912..22093927,-#_92f73ff0d9cbbc6b26f49160d8550b9c | p@chr12:22093912..22093927, - |
| 6.4e-23 | FFCP PHASE2:Hg19::chr7:82471253..82471268,-#_07815d2b606f284c0a70e3eeb3f8288e | p@chr7:82471253..82471268, - |
| 6.4e-23 | FFCP PHASE1:Hg19::chr7:82471253..82471268,-#_07815d2b606f284c0a70e3eeb3f8288e | p@chr7:82471253..82471268, - |
| 2.82e-21 | FFCP PHASE1:Hg19::chr1:152627927..152627931,+#_f56e092de4b43afe864e42df41277cfc | p1@LINC00302 |
| 2.82e-21 | FFCP PHASE2:Hg19::chr22:44708774..44708788,-#_f56e092de4b43afe864e42df41277cfc | p3@KIAA1644 |
| 2.82e-21 | FFCP PHASE1:Hg19::chr22:44708774..44708788,-#_f56e092de4b43afe864e42df41277cfc | p3@KIAA1644 |
| 2.82e-21 | FFCP PHASE2:Hg19::chr1:152627927..152627931,+#_f56e092de4b43afe864e42df41277cfc | p1@LINC00302 |
| 6.31e-21 | FFCP PHASE1:Hg19::chr1:99387558..99387571,-#_f4a17c8c42684ac6a9f564ba32089e6e | p@chr1:99387558..99387571, - |
| 6.31e-21 | FFCP PHASE2:Hg19::chr1:99387558..99387571,-#_f4a17c8c42684ac6a9f564ba32089e6e | p@chr1:99387558..99387571, - |
| 9.43e-21 | FFCP PHASE2:Hg19::chr12:2378229..2378236,-#_2cbe6eff4f881efa2003f8ee91fd8fb2 | p@chr12:2378229..2378236, - |
| 9.43e-21 | FFCP PHASE1:Hg19::chr12:2378229..2378236,-#_2cbe6eff4f881efa2003f8ee91fd8fb2 | p@chr12:2378229..2378236, - |
| 3.25e-19 | FFCP PHASE2:Hg19::chr15:37387034..37387043,+#_d29a7e0d2d0654c4e534db227c4b786e | p@chr15:37387034..37387043, + |
| 3.25e-19 | FFCP PHASE2:Hg19::chr7:81319728..81319744,-#_d29a7e0d2d0654c4e534db227c4b786e | p@chr7:81319728..81319744, - |
| 3.25e-19 | FFCP PHASE1:Hg19::chr15:37387034..37387043,+#_d29a7e0d2d0654c4e534db227c4b786e | p@chr15:37387034..37387043, + |
| 3.25e-19 | FFCP PHASE1:Hg19::chr7:81319728..81319744,-#_d29a7e0d2d0654c4e534db227c4b786e | p@chr7:81319728..81319744, - |
| 4.69e-19 | FFCP PHASE2:Hg19::chr4:87374458..87374467,-#_b83e348cab6fce1b81ac1b302885fab2 | p19@MAPK10 |
| 4.69e-19 | FFCP PHASE1:Hg19::chr4:87374458..87374467,-#_b83e348cab6fce1b81ac1b302885fab2 | p19@MAPK10 |
| 6.23e-18 | FFCP PHASE2:Hg19::chr7:100806494..100806505,-#_f5c2940ad66af33f957c930b78d9967e | p@chr7:100806494..100806505, - |
| 6.23e-18 | FFCP PHASE1:Hg19::chr7:100806494..100806505,-#_f5c2940ad66af33f957c930b78d9967e | p@chr7:100806494..100806505, - |
| 1.03e-17 | FFCP PHASE2:Hg19::chr4:28621802..28621808,+#_bb411fa14f9fd987f8820c910ace8346 | p@chr4:28621802..28621808, + |
| 1.03e-17 | FFCP PHASE1:Hg19::chr4:28621802..28621808,+#_bb411fa14f9fd987f8820c910ace8346 | p@chr4:28621802..28621808, + |
| 1.22e-17 | FFCP PHASE1:Hg19::chr5:176919399..176919410,-#_c1bdf9bfbbecb8c7395d5791adbb6b32 | p31@PDLIM7 |
| 1.22e-17 | FFCP PHASE2:Hg19::chr6:130088354..130088379,-#_c1bdf9bfbbecb8c7395d5791adbb6b32 | p@chr6:130088354..130088379, - |
| 1.22e-17 | FFCP PHASE1:Hg19::chr9:18771731..18771735,+#_c1bdf9bfbbecb8c7395d5791adbb6b32 | p@chr9:18771731..18771735, + |
| 1.22e-17 | FFCP PHASE2:Hg19::chr9:18771731..18771735,+#_c1bdf9bfbbecb8c7395d5791adbb6b32 | p@chr9:18771731..18771735, + |
| 1.22e-17 | FFCP PHASE1:Hg19::chr6:130088354..130088379,-#_c1bdf9bfbbecb8c7395d5791adbb6b32 | p@chr6:130088354..130088379, - |
| 1.22e-17 | FFCP PHASE2:Hg19::chr5:176919399..176919410,-#_c1bdf9bfbbecb8c7395d5791adbb6b32 | p31@PDLIM7 |
| 1.44e-17 | FFCP PHASE1:Hg19::chr15:72534918..72534961,-#_900c03c95e062668392197acefa3623a | p@chr15:72534918..72534961, - |
| 1.44e-17 | FFCP PHASE2:Hg19::chr15:72534918..72534961,-#_900c03c95e062668392197acefa3623a | p@chr15:72534918..72534961, - |
| 1.7e-17 | FFCP PHASE1:Hg19::chr1:226496898..226496907,-#_70e3aed0fa7ac6bf239c1ff038d441b2 | p3@LIN9 |
| 1.7e-17 | FFCP PHASE2:Hg19::chr1:226496898..226496907,-#_70e3aed0fa7ac6bf239c1ff038d441b2 | p3@LIN9 |
| 1.93e-16 | FFCP PHASE1:Hg19::chr9:137702153..137702157,+#_78c12630f07893ae10da9cdb8ea849b0 | p@chr9:137702153..137702157, + |
| 1.93e-16 | FFCP PHASE2:Hg19::chr9:137702153..137702157,+#_78c12630f07893ae10da9cdb8ea849b0 | p@chr9:137702153..137702157, + |
| 2.63e-16 | FFCP PHASE2:Hg19::chr17:79212884..79212895,-#_b1a7491b4d45cebed6641f9ea14c294e | p2@C17orf56 |
| 2.63e-16 | FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_b1a7491b4d45cebed6641f9ea14c294e | p@chr7:140227349..140227360, - |
| 2.63e-16 | FFCP PHASE1:Hg19::chr17:79212884..79212895,-#_b1a7491b4d45cebed6641f9ea14c294e | p2@C17orf56 |
| 2.63e-16 | FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_b1a7491b4d45cebed6641f9ea14c294e | p@chr7:140227349..140227360, - |
| 3.07e-16 | FFCP PHASE2:Hg19::chr7:150652924..150652927,-#_5e08ff98d91f3148db0b0e5c36bb38c8 | p5@KCNH2 |
| 3.07e-16 | FFCP PHASE1:Hg19::chr7:150652924..150652927,-#_5e08ff98d91f3148db0b0e5c36bb38c8 | p5@KCNH2 |
| 7.46e-16 | FFCP PHASE2:Hg19::chr1:152670795..152670806,+#_0715a9ba718a4e4224a3bf3459a20a64 | p2@LCE2A |
| 7.46e-16 | FFCP PHASE1:Hg19::chr1:152670795..152670806,+#_0715a9ba718a4e4224a3bf3459a20a64 | p2@LCE2A |
| 2.06e-15 | FFCP PHASE1:Hg19::chr3:138665774..138665786,-#_a6f067a54c411c9ad6652ba37aec530c | p5@FOXL2 |
| 2.06e-15 | FFCP PHASE2:Hg19::chr3:138665774..138665786,-#_a6f067a54c411c9ad6652ba37aec530c | p5@FOXL2 |
| 2.38e-15 | FFCP PHASE1:Hg19::chr11:32457307..32457323,+#_9f9c94264d9849fc9267626c10cc3232 | p4@WT1-AS |
| 2.38e-15 | FFCP PHASE2:Hg19::chr11:32457307..32457323,+#_9f9c94264d9849fc9267626c10cc3232 | p4@WT1-AS |
| 9.36e-15 | FFCP PHASE2:Hg19::chr7:81146338..81146341,-#_a3ba4eaeabea4e2713ed6cd4efebbc75 | p@chr7:81146338..81146341, - |
| 9.36e-15 | FFCP PHASE1:Hg19::chr7:81146338..81146341,-#_a3ba4eaeabea4e2713ed6cd4efebbc75 | p@chr7:81146338..81146341, - |
| 1.41e-14 | FFCP PHASE2:Hg19::chr4:72204780..72204830,+#_b331ba2ea8d047e2bb85b15ee9bdc92f | p2@SLC4A4 |
| 1.41e-14 | FFCP PHASE1:Hg19::chr4:72204780..72204830,+#_b331ba2ea8d047e2bb85b15ee9bdc92f | p2@SLC4A4 |
| 2.11e-14 | FFCP PHASE2:Hg19::chr19:14544083..14544090,+#_80197aa8ef13424a3ca039669f61f760 | p6@PKN1 |
| 2.11e-14 | FFCP PHASE2:Hg19::chr17:38252990..38252995,-#_80197aa8ef13424a3ca039669f61f760 | p12@NR1D1 |
| 2.11e-14 | FFCP PHASE1:Hg19::chr19:14544083..14544090,+#_80197aa8ef13424a3ca039669f61f760 | p6@PKN1 |
| 2.11e-14 | FFCP PHASE1:Hg19::chr17:38252990..38252995,-#_80197aa8ef13424a3ca039669f61f760 | p12@NR1D1 |
