CL:0002170: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date=2010-08-26T02:51:30Z | |obo_creation_date=2010-08-26T02:51:30Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:26, 26 June 2012
| Name: | keratinized cell of the oral mucosa |
|---|---|
| Namespace: | cell |
| Definition: | "A keratinized cell located in the hard palate or gingiva." [GOC:tfm, PMID:12014572] |
| Created by: | tmeehan |
| Creation date: | 2010-08-26T02:51:30Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000237(keratinizing barrier epithelial cell),CL:0002336(buccal mucosa cell) |
|---|
Children
| derives from: | FF:0000083 (human oral mucosa keratinocyte sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11251-116E9 (Keratinocyte - oral, donor1)
Mouse (Mus musculus)
- 11251-116E9 (Keratinocyte - oral, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002170 (keratinized cell of the oral mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:44302954..44302996,-#_ce69272689b3385ba4c390cb68f03b2c | p@chr7:44302954..44302996, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:44302954..44302996,-#_ce69272689b3385ba4c390cb68f03b2c | p@chr7:44302954..44302996, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:107568782..107568784,-#_ce69272689b3385ba4c390cb68f03b2c | p@chr6:107568782..107568784, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:107568782..107568784,-#_ce69272689b3385ba4c390cb68f03b2c | p@chr6:107568782..107568784, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:56483677..56483688,-#_197cf59ed7dfdd64dd8bab1c7bc584fb | p138@DST |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:56483677..56483688,-#_197cf59ed7dfdd64dd8bab1c7bc584fb | p138@DST |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:44963669..44963674,+#_7bc2c01a4163022a475eae4b6a7e9181 | p@chr4:44963669..44963674, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:44963669..44963674,+#_7bc2c01a4163022a475eae4b6a7e9181 | p@chr4:44963669..44963674, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr16:3041330..3041336,+#_890f93db5ef218ce664c8d9f7719eff2 | p@chr16:3041330..3041336, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr16:3041330..3041336,+#_890f93db5ef218ce664c8d9f7719eff2 | p@chr16:3041330..3041336, + |
| 9.99e-30 | FFCP PHASE2:Hg19::chr6:56483141..56483154,-#_9780f06bc5c4ee6f226c8319d07e473d | p@chr6:56483141..56483154, - |
| 9.99e-30 | FFCP PHASE1:Hg19::chr5:167247779..167247789,+#_9780f06bc5c4ee6f226c8319d07e473d | p20@ODZ2 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr5:167247779..167247789,+#_9780f06bc5c4ee6f226c8319d07e473d | p20@ODZ2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr6:56483141..56483154,-#_9780f06bc5c4ee6f226c8319d07e473d | p@chr6:56483141..56483154, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_afec93d2b007e32e77ad6864d78f19e8 | p3@GSDMC |
| 1.78e-29 | FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_afec93d2b007e32e77ad6864d78f19e8 | p3@GSDMC |
| 3.16e-29 | FFCP PHASE1:Hg19::chr3:17780966..17780986,-#_47b1b7d793fa1cae6e26d5acea5d18eb | p11@TBC1D5 |
| 3.16e-29 | FFCP PHASE1:Hg19::chr2:227008823..227008831,-#_47b1b7d793fa1cae6e26d5acea5d18eb | p@chr2:227008823..227008831, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr3:17780966..17780986,-#_47b1b7d793fa1cae6e26d5acea5d18eb | p11@TBC1D5 |
| 3.16e-29 | FFCP PHASE2:Hg19::chr2:227008823..227008831,-#_47b1b7d793fa1cae6e26d5acea5d18eb | p@chr2:227008823..227008831, - |
| 4.2e-29 | FFCP PHASE2:Hg19::chrX:150707031..150707048,-#_016dc9227c3b062d23dd37e8df6b4b1f | p@chrX:150707031..150707048, - |
| 4.2e-29 | FFCP PHASE1:Hg19::chrX:150707031..150707048,-#_016dc9227c3b062d23dd37e8df6b4b1f | p@chrX:150707031..150707048, - |
| 3.58e-26 | FFCP PHASE1:Hg19::chr9:113801505..113801517,-#_6660c5312be7688cfce5ec056dc3882f | p36@LPAR1 |
| 3.58e-26 | FFCP PHASE2:Hg19::chr9:113801505..113801517,-#_6660c5312be7688cfce5ec056dc3882f | p36@LPAR1 |
| 7.62e-26 | FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_e24c409d3801cb3efb731ed0636f9637 | p@chr2:19428508..19428522, - |
| 7.62e-26 | FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_e24c409d3801cb3efb731ed0636f9637 | p@chr2:19428508..19428522, - |
| 9.79e-26 | FFCP PHASE1:Hg19::chr11:8795787..8795804,-#_2c880528f3f35dd772fca1f57656ed08 | p26@ST5 |
| 9.79e-26 | FFCP PHASE2:Hg19::chr11:8795787..8795804,-#_2c880528f3f35dd772fca1f57656ed08 | p26@ST5 |
| 1.34e-23 | FFCP PHASE2:Hg19::chr15:42239202..42239230,-#_2a41725a0e5794ef106fd7c5ee1a7833 | p@chr15:42239202..42239230, - |
| 1.34e-23 | FFCP PHASE2:Hg19::chr12:52911408..52911421,+#_2a41725a0e5794ef106fd7c5ee1a7833 | p@chr12:52911408..52911421, + |
| 1.34e-23 | FFCP PHASE1:Hg19::chr15:42239202..42239230,-#_2a41725a0e5794ef106fd7c5ee1a7833 | p@chr15:42239202..42239230, - |
| 1.34e-23 | FFCP PHASE1:Hg19::chr12:52911408..52911421,+#_2a41725a0e5794ef106fd7c5ee1a7833 | p@chr12:52911408..52911421, + |
| 2.1e-23 | FFCP PHASE1:Hg19::chr16:82671490..82671521,+#_bad6dbed97c4c7d20ba5de6e4004a816 | p@chr16:82671490..82671521, + |
| 2.1e-23 | FFCP PHASE2:Hg19::chr18:9538358..9538360,+#_bad6dbed97c4c7d20ba5de6e4004a816 | p@chr18:9538358..9538360, + |
| 2.1e-23 | FFCP PHASE1:Hg19::chr18:9538358..9538360,+#_bad6dbed97c4c7d20ba5de6e4004a816 | p@chr18:9538358..9538360, + |
| 2.1e-23 | FFCP PHASE2:Hg19::chr16:82671490..82671521,+#_bad6dbed97c4c7d20ba5de6e4004a816 | p@chr16:82671490..82671521, + |
| 2.62e-23 | FFCP PHASE1:Hg19::chr3:38017384..38017388,+#_e446c7b6d35370d0c793780dc27fdd61 | p@chr3:38017384..38017388, + |
| 2.62e-23 | FFCP PHASE2:Hg19::chr3:38017384..38017388,+#_e446c7b6d35370d0c793780dc27fdd61 | p@chr3:38017384..38017388, + |
| 2.62e-23 | FFCP PHASE2:Hg19::chr15:76443020..76443024,-#_e446c7b6d35370d0c793780dc27fdd61 | p@chr15:76443020..76443024, - |
| 2.62e-23 | FFCP PHASE1:Hg19::chr15:76443020..76443024,-#_e446c7b6d35370d0c793780dc27fdd61 | p@chr15:76443020..76443024, - |
| 6.4e-23 | FFCP PHASE1:Hg19::chr1:236247199..236247215,-#_06e430958a9d945bebf17f9ba273c287 | p@chr1:236247199..236247215, - |
| 6.4e-23 | FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_06e430958a9d945bebf17f9ba273c287 | p@chr13:43059605..43059611, + |
| 6.4e-23 | FFCP PHASE2:Hg19::chr1:236247199..236247215,-#_06e430958a9d945bebf17f9ba273c287 | p@chr1:236247199..236247215, - |
| 6.4e-23 | FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_06e430958a9d945bebf17f9ba273c287 | p@chr13:43059605..43059611, + |
| 2.82e-21 | FFCP PHASE1:Hg19::chr6:56484743..56484754,-#_89cc93b9463f6b829c3bda76c859e228 | p@chr6:56484743..56484754, - |
| 2.82e-21 | FFCP PHASE2:Hg19::chr6:56484743..56484754,-#_89cc93b9463f6b829c3bda76c859e228 | p@chr6:56484743..56484754, - |
| 3.45e-21 | FFCP PHASE1:Hg19::chr1:94240846..94240855,-#_77f8b4b7e0f73339aab07ac6b1819ce4 | p5@uc001dqd.1 |
| 3.45e-21 | FFCP PHASE2:Hg19::chr1:94240846..94240855,-#_77f8b4b7e0f73339aab07ac6b1819ce4 | p5@uc001dqd.1 |
| 4.22e-21 | FFCP PHASE1:Hg19::chr12:98739159..98739191,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4 | p@chr12:98739159..98739191, - |
| 4.22e-21 | FFCP PHASE2:Hg19::chr12:28125967..28125978,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4 | p16@PTHLH |
| 4.22e-21 | FFCP PHASE2:Hg19::chr12:98739159..98739191,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4 | p@chr12:98739159..98739191, - |
| 4.22e-21 | FFCP PHASE1:Hg19::chr12:28125967..28125978,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4 | p16@PTHLH |
| 1.88e-19 | FFCP PHASE1:Hg19::chr5:167247865..167247872,+#_73ddc070b4636d533c53dca38dbc452c | p23@ODZ2 |
| 1.88e-19 | FFCP PHASE2:Hg19::chr5:167247865..167247872,+#_73ddc070b4636d533c53dca38dbc452c | p23@ODZ2 |
| 2.25e-19 | FFCP PHASE1:Hg19::chr6:56485258..56485269,-#_3ec7307d16048f1f956238bbb7f3a436 | p@chr6:56485258..56485269, - |
| 2.25e-19 | FFCP PHASE2:Hg19::chr6:56485258..56485269,-#_3ec7307d16048f1f956238bbb7f3a436 | p@chr6:56485258..56485269, - |
| 2.25e-19 | FFCP PHASE2:Hg19::chr17:7951995..7952006,+#_3ec7307d16048f1f956238bbb7f3a436 | p@chr17:7951995..7952006, + |
| 2.25e-19 | FFCP PHASE1:Hg19::chr17:7951995..7952006,+#_3ec7307d16048f1f956238bbb7f3a436 | p@chr17:7951995..7952006, + |
| 3.25e-19 | FFCP PHASE1:Hg19::chr14:51955760..51955769,+#_dbaa31f0e3a67f73754b2727da8ecb32 | p29@FRMD6 |
| 3.25e-19 | FFCP PHASE2:Hg19::chr14:51955760..51955769,+#_dbaa31f0e3a67f73754b2727da8ecb32 | p29@FRMD6 |
| 5.62e-19 | FFCP PHASE1:Hg19::chr1:183212642..183212654,+#_7205043a90e9440299e7758b188873e5 | p@chr1:183212642..183212654, + |
| 5.62e-19 | FFCP PHASE2:Hg19::chr1:183212642..183212654,+#_7205043a90e9440299e7758b188873e5 | p@chr1:183212642..183212654, + |
| 5.62e-19 | FFCP PHASE2:Hg19::chr14:85799279..85799283,+#_7205043a90e9440299e7758b188873e5 | p@chr14:85799279..85799283, + |
| 5.62e-19 | FFCP PHASE1:Hg19::chr14:85799279..85799283,+#_7205043a90e9440299e7758b188873e5 | p@chr14:85799279..85799283, + |
| 2.66e-18 | FFCP PHASE1:Hg19::chr6:56484963..56484989,+#_8bf7d8ed8157dfcfae2275e895ad8558 | p@chr6:56484963..56484989, + |
| 2.66e-18 | FFCP PHASE2:Hg19::chr6:56484963..56484989,+#_8bf7d8ed8157dfcfae2275e895ad8558 | p@chr6:56484963..56484989, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr11:64110458..64110478,+#_3ae5624a8ed3778d1d535326c37eedb1 | p@chr11:64110458..64110478, + |
| 1.03e-17 | FFCP PHASE1:Hg19::chr11:64110458..64110478,+#_3ae5624a8ed3778d1d535326c37eedb1 | p@chr11:64110458..64110478, + |
| 1.22e-17 | FFCP PHASE2:Hg19::chr13:43451842..43451845,+#_9211988581ca7a38fc4d58f7b7e2e559 | p@chr13:43451842..43451845, + |
| 1.22e-17 | FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_9211988581ca7a38fc4d58f7b7e2e559 | p17@PTHLH |
| 1.22e-17 | FFCP PHASE1:Hg19::chr13:43451842..43451845,+#_9211988581ca7a38fc4d58f7b7e2e559 | p@chr13:43451842..43451845, + |
| 1.22e-17 | FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_9211988581ca7a38fc4d58f7b7e2e559 | p17@PTHLH |
| 1.44e-17 | FFCP PHASE2:Hg19::chr18:21479368..21479399,-#_838fbccf0c53022384205662709929de | p@chr18:21479368..21479399, - |
| 1.44e-17 | FFCP PHASE1:Hg19::chr18:21479368..21479399,-#_838fbccf0c53022384205662709929de | p@chr18:21479368..21479399, - |
| 1.7e-17 | FFCP PHASE2:Hg19::chr11:2022489..2022501,-#_2322f9c95d7847901a2cd3eb16fa7a12 | p37@H19 |
| 1.7e-17 | FFCP PHASE1:Hg19::chr11:2022489..2022501,-#_2322f9c95d7847901a2cd3eb16fa7a12 | p37@H19 |
| 5.53e-17 | FFCP PHASE2:Hg19::chr12:52908434..52908443,-#_c786231960bd371d8229326ce98a5d59 | p@chr12:52908434..52908443, - |
| 5.53e-17 | FFCP PHASE1:Hg19::chr12:52908434..52908443,-#_c786231960bd371d8229326ce98a5d59 | p@chr12:52908434..52908443, - |
| 6.47e-17 | FFCP PHASE1:Hg19::chr6:56480719..56480734,-#_5d1d75cc775fd12b82e1a3e728465f3e | p@chr6:56480719..56480734, - |
| 6.47e-17 | FFCP PHASE2:Hg19::chr6:56480719..56480734,-#_5d1d75cc775fd12b82e1a3e728465f3e | p@chr6:56480719..56480734, - |
| 8.86e-17 | FFCP PHASE2:Hg19::chr15:52313600..52313611,+#_aa49b92beed8d232327244d42e58da5d | p12@MAPK6 |
| 8.86e-17 | FFCP PHASE1:Hg19::chr15:52313600..52313611,+#_aa49b92beed8d232327244d42e58da5d | p12@MAPK6 |
| 1.41e-16 | FFCP PHASE1:Hg19::chr6:56483497..56483514,-#_db99ed5d060444b3255dc69fce835a45 | p84@DST |
| 1.41e-16 | FFCP PHASE2:Hg19::chr6:56483497..56483514,-#_db99ed5d060444b3255dc69fce835a45 | p84@DST |
| 1.93e-16 | FFCP PHASE1:Hg19::chr16:3041159..3041167,+#_e238e551d92a37bbf0cfec9c18e40bfd | p@chr16:3041159..3041167, + |
| 1.93e-16 | FFCP PHASE2:Hg19::chr10:120261556..120261561,+#_e238e551d92a37bbf0cfec9c18e40bfd | p@chr10:120261556..120261561, + |
| 1.93e-16 | FFCP PHASE2:Hg19::chr16:3041159..3041167,+#_e238e551d92a37bbf0cfec9c18e40bfd | p@chr16:3041159..3041167, + |
| 1.93e-16 | FFCP PHASE1:Hg19::chr10:120261556..120261561,+#_e238e551d92a37bbf0cfec9c18e40bfd | p@chr10:120261556..120261561, + |
| 6.44e-16 | FFCP PHASE2:Hg19::chr6:56484382..56484393,-#_da03b782fbba5b434bf888cf99ba6574 | p76@DST |
| 6.44e-16 | FFCP PHASE1:Hg19::chr6:56484382..56484393,-#_da03b782fbba5b434bf888cf99ba6574 | p76@DST |
| 9.99e-16 | FFCP PHASE1:Hg19::chr2:26492664..26492712,+#_4fd5813ff5dc0406e29a392a59e66278 | p8@HADHB |
| 9.99e-16 | FFCP PHASE2:Hg19::chr2:26492664..26492712,+#_4fd5813ff5dc0406e29a392a59e66278 | p8@HADHB |
| 1.16e-15 | FFCP PHASE1:Hg19::chr18:61171128..61171130,+#_633e87c98bf1af4eec49da18121a93b9 | p@chr18:61171128..61171130, + |
| 1.16e-15 | FFCP PHASE2:Hg19::chr18:61171128..61171130,+#_633e87c98bf1af4eec49da18121a93b9 | p@chr18:61171128..61171130, + |
| 2.06e-15 | FFCP PHASE2:Hg19::chr18:9617195..9617198,-#_c6651f6df5f721f0b39bb825a7230137 | p@chr18:9617195..9617198, - |
| 2.06e-15 | FFCP PHASE1:Hg19::chr18:9617195..9617198,-#_c6651f6df5f721f0b39bb825a7230137 | p@chr18:9617195..9617198, - |
| 2.38e-15 | FFCP PHASE1:Hg19::chr18:12288270..12288282,+#_048e6177f428c6bc48ac6c9e493f1a3f | p@chr18:12288270..12288282, + |
| 2.38e-15 | FFCP PHASE1:Hg19::chr4:89514516..89514528,+#_048e6177f428c6bc48ac6c9e493f1a3f | p7@HERC3 |
| 2.38e-15 | FFCP PHASE2:Hg19::chr4:89514516..89514528,+#_048e6177f428c6bc48ac6c9e493f1a3f | p7@HERC3 |
| 2.38e-15 | FFCP PHASE2:Hg19::chr18:12288270..12288282,+#_048e6177f428c6bc48ac6c9e493f1a3f | p@chr18:12288270..12288282, + |
