CL:0000215: Difference between revisions
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|def="A cell whose primary function is to prevent the transport of stuff across compartments." [JB:jb] | |def="A cell whose primary function is to prevent the transport of stuff across compartments." [JB:jb] | ||
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|is_a=CL: | |is_a=CL:0000003 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
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|develops_from= | |develops_from= | ||
Revision as of 17:24, 26 June 2012
| Name: | barrier cell |
|---|---|
| Namespace: | cell |
| Definition: | "A cell whose primary function is to prevent the transport of stuff across compartments." [JB:jb] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000003(native cell) |
|---|
Children
| is a: | CL:0000213 (lining cell),CL:0000217 (insulating cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10845-111E8 (mesothelioma cell line:NCI-H28)
- 10846-111E9 (mesothelioma cell line:NCI-H226)
- 10847-111F1 (mesothelioma cell line:NCI-H2052)
- 10848-111F2 (mesothelioma cell line:NCI-H2452)
- 10849-111F3 (mesothelioma cell line:Mero-14)
- 10850-111F4 (mesothelioma cell line:Mero-25)
- 10851-111F5 (mesothelioma cell line:Mero-41)
... further results Mouse (Mus musculus)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10845-111E8 (mesothelioma cell line:NCI-H28)
- 10846-111E9 (mesothelioma cell line:NCI-H226)
- 10847-111F1 (mesothelioma cell line:NCI-H2052)
- 10848-111F2 (mesothelioma cell line:NCI-H2452)
- 10849-111F3 (mesothelioma cell line:Mero-14)
- 10850-111F4 (mesothelioma cell line:Mero-25)
- 10851-111F5 (mesothelioma cell line:Mero-41)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000215 (barrier cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.38e-90 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_65783fb676651236bae39d787fcbde36 | p@chr6:3753188..3753192, - |
| 9.38e-90 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_65783fb676651236bae39d787fcbde36 | p@chr6:3753188..3753192, - |
| 1.08e-85 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_e41d6999c57a5869e2b0992b84c845fe | p1@MIR216A |
| 1.08e-85 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_e41d6999c57a5869e2b0992b84c845fe | p1@MIR216A |
| 1.18e-82 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_9f96bb2b83d0fcf7675dc3e3cdf22278 | p@chr11:124761247..124761258, - |
| 1.18e-82 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_9f96bb2b83d0fcf7675dc3e3cdf22278 | p@chr11:124761247..124761258, - |
| 3.15e-82 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_0f322c395566c0cda612d1cc88a8d37a | p5@ICAM2 |
| 3.15e-82 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_0f322c395566c0cda612d1cc88a8d37a | p5@ICAM2 |
| 7.67e-74 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_c58eb987d1ea97432e0b19c278f9b1f1 | p@chr16:2220383..2220402, + |
| 7.67e-74 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_c58eb987d1ea97432e0b19c278f9b1f1 | p@chr16:2220383..2220402, + |
| 2.09e-71 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_af81b845ae735cddbdf526041d803f5a | p@chrX:71299684..71299699, + |
| 2.09e-71 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_af81b845ae735cddbdf526041d803f5a | p@chrX:71299684..71299699, + |
| 2.28e-71 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_5a9981962d23e2c36adebad578a35ad2 | p1@ENST00000513158 |
| 2.28e-71 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_5a9981962d23e2c36adebad578a35ad2 | p1@ENST00000513158 |
| 8.35e-71 | FFCP PHASE2:Hg19::chr12:80084018..80084035,-#_5115b4d8351d4b9a6a3b9b8505059cbe | p17@PAWR |
| 8.35e-71 | FFCP PHASE1:Hg19::chr12:80084018..80084035,-#_5115b4d8351d4b9a6a3b9b8505059cbe | p17@PAWR |
| 1.45e-70 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_8a0dad40098d6b907cf8a92e5fe15121 | p@chr13:32835894..32835907, + |
| 1.45e-70 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_8a0dad40098d6b907cf8a92e5fe15121 | p@chr13:32835894..32835907, + |
| 2.27e-70 | FFCP PHASE1:Hg19::chr19:4639579..4639589,+#_5808d1077916b6bc64f81ff9795c2d89 | p2@TNFAIP8L1 |
| 2.27e-70 | FFCP PHASE2:Hg19::chr19:4639579..4639589,+#_5808d1077916b6bc64f81ff9795c2d89 | p2@TNFAIP8L1 |
| 3.43e-69 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_e3ad75cd0d91b201d9c3434fc1df3544 | p@chr18:33046982..33046991, - |
| 3.43e-69 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_e3ad75cd0d91b201d9c3434fc1df3544 | p@chr18:33046982..33046991, - |
| 2.3e-68 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_7f9641ef69527b23f443eb2e6c6ef832 | p@chr18:33047117..33047138, - |
| 2.3e-68 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_7f9641ef69527b23f443eb2e6c6ef832 | p@chr18:33047117..33047138, - |
| 3.25e-68 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_75cc5a2e3abdcd45a40cf9be5cfebdcd | p@chr15:39423060..39423066, + |
| 3.25e-68 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_75cc5a2e3abdcd45a40cf9be5cfebdcd | p@chr15:39423060..39423066, + |
| 6.57e-68 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_f3b95aece29db7de8db6d6c1727ed55b | p2@BMX |
| 6.57e-68 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_f3b95aece29db7de8db6d6c1727ed55b | p2@BMX |
| 9.72e-67 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_e0b65d87ce55899cef65e6d48b9e60e4 | p6@CLEC14A |
| 9.72e-67 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_e0b65d87ce55899cef65e6d48b9e60e4 | p6@CLEC14A |
| 1.07e-66 | FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_f8300d175efa25b9ea5e02cd40827965 | p@chr12:105863654..105863682, + |
| 1.07e-66 | FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_f8300d175efa25b9ea5e02cd40827965 | p@chr12:105863654..105863682, + |
| 2.37e-66 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_6774721cdce37d3dae434418f8b4a282 | p@chr3:58034268..58034295, + |
| 2.37e-66 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_6774721cdce37d3dae434418f8b4a282 | p@chr3:58034268..58034295, + |
| 2.95e-66 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_8e9df00baad7bb0b37906c5af899904a | p@chr18:33047157..33047168, - |
| 2.95e-66 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_8e9df00baad7bb0b37906c5af899904a | p@chr18:33047157..33047168, - |
| 3.95e-66 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_d7097b03cd86060e3d8e69c4ccd23174 | p@chr3:43538305..43538325, - |
| 3.95e-66 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_d7097b03cd86060e3d8e69c4ccd23174 | p@chr3:43538305..43538325, - |
| 4.08e-66 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_37e6579128236950bb350b5c844c6bd9 | p14@PTPRE |
| 4.08e-66 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_37e6579128236950bb350b5c844c6bd9 | p14@PTPRE |
| 4.12e-66 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_8dcad87b2e041553d4e212ab88e0fd15 | p5@CLEC14A |
| 4.12e-66 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_8dcad87b2e041553d4e212ab88e0fd15 | p5@CLEC14A |
| 7.46e-66 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_58d495ad63aaaea88d94d20592edcde5 | p@chr12:105863636..105863650, + |
| 7.46e-66 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_58d495ad63aaaea88d94d20592edcde5 | p@chr12:105863636..105863650, + |
| 1.52e-65 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_c3afbfcf5a8b9ab20d27abf61166ccc4 | p@chr9:139543390..139543404, + |
| 1.52e-65 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_c3afbfcf5a8b9ab20d27abf61166ccc4 | p@chr9:139543390..139543404, + |
| 3.21e-62 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_9c48f36868081f114d6ef2c9140d74a9 | p@chr13:32835912..32835936, + |
| 3.21e-62 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_9c48f36868081f114d6ef2c9140d74a9 | p@chr13:32835912..32835936, + |
| 1.13e-60 | FFCP PHASE1:Hg19::chr13:32838801..32838818,+#_8a0a7fba92964bf64a01ad801ac6a22f | p9@FRY |
| 1.13e-60 | FFCP PHASE2:Hg19::chr13:32838801..32838818,+#_8a0a7fba92964bf64a01ad801ac6a22f | p9@FRY |
| 3.1e-60 | FFCP PHASE2:Hg19::chr16:66413317..66413328,+#_028eff1ec6f7835d9c4df3d8f651283d | p1@AB385138 |
| 3.1e-60 | FFCP PHASE1:Hg19::chr16:66413317..66413328,+#_028eff1ec6f7835d9c4df3d8f651283d | p1@AB385138 |
| 3.19e-60 | FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_2cb61786d12f8bd9fed8fcc60e3cde7c | p4@ABI3 |
| 3.19e-60 | FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_2cb61786d12f8bd9fed8fcc60e3cde7c | p4@ABI3 |
| 3.76e-60 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_88c43b47f32bbbf524372c8a8e6842d5 | p@chr19:41985048..41985050, - |
| 3.76e-60 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_88c43b47f32bbbf524372c8a8e6842d5 | p@chr19:41985048..41985050, - |
| 4.08e-60 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_e1d66c7f97a429829257478a6ca61866 | p12@KSR2 |
| 4.08e-60 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_e1d66c7f97a429829257478a6ca61866 | p12@KSR2 |
| 6.68e-60 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_3eff53f3c4454a9961f073e4ca876593 | p8@GIMAP6 |
| 6.68e-60 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_3eff53f3c4454a9961f073e4ca876593 | p8@GIMAP6 |
| 1.42e-59 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_4743dd0e545cb92598a3f60036e6203f | p11@UIMC1 |
| 1.42e-59 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_4743dd0e545cb92598a3f60036e6203f | p11@UIMC1 |
| 2.09e-59 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_f33ed3b3ce34eeec16a35c28cc48d22e | p6@WDFY4 |
| 2.09e-59 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_f33ed3b3ce34eeec16a35c28cc48d22e | p6@WDFY4 |
| 2.31e-59 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_63b708f33c56e110a5c3c8676661236c | p@chr12:105863705..105863718, + |
| 2.31e-59 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_63b708f33c56e110a5c3c8676661236c | p@chr12:105863705..105863718, + |
| 2.82e-58 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_a9aa4c90318b66c94cf27996dc8f3eb3 | p@chr10:99655692..99655725, - |
| 2.82e-58 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_a9aa4c90318b66c94cf27996dc8f3eb3 | p@chr10:99655692..99655725, - |
| 3.16e-58 | FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_058f58ea1b110078d8797cdd54eb7f9f | p@chrX:128781853..128781866, - |
| 3.16e-58 | FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_058f58ea1b110078d8797cdd54eb7f9f | p@chrX:128781853..128781866, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:13346379..13346390,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr2:13346379..13346390, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:17441128..17441144,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr6:17441128..17441144, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:24270578..24270588,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr18:24270578..24270588, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:57302359..57302364,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p18@Megf10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:99720058..99720068,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:99720058..99720068, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:99720036..99720055,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:99720036..99720055, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:13496978..13496987,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr2:13496978..13496987, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:95431700..95431710,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:95431700..95431710, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:137468262..137468263,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p13@Eps8 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:57302359..57302364,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p18@Megf10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:13346379..13346390,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr2:13346379..13346390, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:74279307..74279342,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr14:74279307..74279342, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:114866423..114866442,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr7:114866423..114866442, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:138011031..138011037,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr7:138011031..138011037, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:14575585..14575594,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p7@1700012B09Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:92754564..92754577,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr1:92754564..92754577, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:19939078..19939081,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:19939078..19939081, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:56925925..56925960,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:56925925..56925960, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:152054997..152055007,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr5:152054997..152055007, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:20332675..20332683,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr13:20332675..20332683, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:24270578..24270588,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr18:24270578..24270588, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:95431700..95431710,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:95431700..95431710, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:87485402..87485411,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr15:87485402..87485411, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:128359639..128359653,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr10:128359639..128359653, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:138004756..138004766,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr7:138004756..138004766, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:149092046..149092052,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chrX:149092046..149092052, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:57302368..57302389,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p7@Megf10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:99720058..99720068,-#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr11:99720058..99720068, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:92754564..92754577,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr1:92754564..92754577, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:50562386..50562393,+#_12d6f061554a4bd2f3dfc471ec9d6955 | p@chr9:50562386..50562393, + |
