UBERON:0010133: Difference between revisions
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|def= | |def= | ||
|xref=MA:0000720 | |xref=MA:0000720 | ||
|is_a=UBERON: | |is_a=UBERON:0002368;;UBERON:0004121 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:09, 26 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002368(endocrine gland),UBERON:0004121(ectoderm-derived structure) |
|---|
Children
| is a: | UBERON:0000007 (pituitary gland),UBERON:0010134 (secretory circumventricular organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
... further results Mouse (Mus musculus)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010133 (neuroendocrine gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.57e-195 | FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 2.57e-195 | FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 1.0e-156 | FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.0e-156 | FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.5e-156 | FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 1.5e-156 | FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 2.79e-131 | FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 2.79e-131 | FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 1.07e-130 | FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.07e-130 | FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.0e-112 | FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.0e-112 | FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.76e-111 | FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 1.76e-111 | FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 8.91e-111 | FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 8.91e-111 | FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 2.76e-110 | FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 2.76e-110 | FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 2.76e-110 | FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 5.02e-99 | FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 5.02e-99 | FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 1.38e-98 | FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.38e-98 | FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:17930871..17930877,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:17930871..17930877, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:204620238..204620253,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:204620238..204620253, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:74463608..74463612,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p5@AANAT |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17075761..17075773,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17075761..17075773, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135472861..135472868,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135472861..135472868, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:211830430..211830435,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:211830430..211830435, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:33146501..33146521,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p32@DMD |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61995220..61995244,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61995220..61995244, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:57975398..57975401,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:57975398..57975401, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:211830446..211830457,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:211830446..211830457, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:31006649..31006651,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:31006649..31006651, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:92310419..92310432,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:92310419..92310432, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135521466..135521470,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135521466..135521470, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18042584..18042593,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18042584..18042593, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22287695..22287700,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287695..22287700, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:2608406..2608413,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr19:2608406..2608413, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:81859007..81859036,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:81859007..81859036, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22290492..22290497,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22290492..22290497, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:56628524..56628547,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:56628524..56628547, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:121088132..121088135,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p15@CABP1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:56628548..56628553,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:56628548..56628553, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:60826120..60826127,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:60826120..60826127, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:6954834..6954841,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p9@GNB3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:119868809..119868839,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr5:119868809..119868839, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:38147077..38147085,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chrX:38147077..38147085, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:75864329..75864335,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p11@SRRM3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:74951707..74951719,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p9@LOC100507050 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:33087873..33087886,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:33087873..33087886, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:99860786..99860791,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:99860786..99860791, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135504337..135504342,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135504337..135504342, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:57197193..57197194,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p1@ENST00000554597 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:18021982..18021985,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@MYO15A |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18041206..18041211,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18041206..18041211, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61996393..61996421,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p4@CSHL1, p4@GH1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22287720..22287725,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287720..22287725, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:50898098..50898107,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:50898098..50898107, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:158737729..158737738,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr5:158737729..158737738, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:99860883..99860921,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:99860883..99860921, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:52650486..52650491,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:52650486..52650491, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22292828..22292837,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22292828..22292837, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:20985690..20985695,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p38@KCNIP4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:99033409..99033415,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p16@MATN2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:240043364..240043366,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:240043364..240043366, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:1188439..1188454,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr4:1188439..1188454, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:49621658..49621666,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p21@TUBA1C |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:107545606..107545631,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr3:107545606..107545631, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:216447404..216447411,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p1@ENST00000457625 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61996252..61996253,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@GH1, p3@CSHL1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:241080084..241080093,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p5@OTOS |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:13009334..13009341,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:13009334..13009341, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:56963093..56963105,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr18:56963093..56963105, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:55422293..55422300,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:55422293..55422300, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:216447425..216447432,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@ENST00000457625 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18067951..18067954,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18067951..18067954, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:18066319..18066337,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:18066319..18066337, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:121088121..121088131,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p11@CABP1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9186866..9186885,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9186866..9186885, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:55470964..55470974,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr15:55470964..55470974, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473205..135473218,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473205..135473218, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:7979665..7979675,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr19:7979665..7979675, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr18:56962131..56962138,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr18:56962131..56962138, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61995704..61995739,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61995704..61995739, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61994797..61994839,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61994797..61994839, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:88661694..88661709,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:88661694..88661709, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:25264978..25265001,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:25264978..25265001, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135515939..135515941,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135515939..135515941, + |
