UBERON:0005904: Difference between revisions
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|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 17:07, 26 June 2012
| Name: | duct of male reproductive system |
|---|---|
| Comments: | groups the individual ducts in a variety of species |
| Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct),UBERON:0005156(reproductive structure) |
|---|
Children
| is a: | UBERON:0001000 (vas deferens),UBERON:0001301 (epididymis),UBERON:0001343 (seminiferous tubule of testis),UBERON:0006947 (male genital duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 11255-116F4 (Sertoli Cells, donor1)
- 11333-117F1 (Sertoli Cells, donor2)
- 1310-23B1 (epididymis and seminiferous tubule, neonate N00)
- 1387-42A2 (epididymis and seminiferous tubule, neonate N30)
- 1955-52E4
- 51-27F8 (vesicular gland, adult)
- 58-23B2 (epididymis, adult)
Mouse (Mus musculus)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 11255-116F4 (Sertoli Cells, donor1)
- 11333-117F1 (Sertoli Cells, donor2)
- 1310-23B1 (epididymis and seminiferous tubule, neonate N00)
- 1387-42A2 (epididymis and seminiferous tubule, neonate N30)
- 1955-52E4
- 51-27F8 (vesicular gland, adult)
- 58-23B2 (epididymis, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005904 (duct of male reproductive system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125648641..125648646,-#_c38747dd6812763f8872ffe5ad95553e | p2@PATE2 |
| 6.94e-147 | FFCP PHASE1:Hg19::chr9:138555154..138555159,+#_c38747dd6812763f8872ffe5ad95553e | p1@LCN9 |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:69950851..69950887,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:69950851..69950887, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr14:21214091..21214097,+#_c38747dd6812763f8872ffe5ad95553e | p3@EDDM3A |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125617636..125617646,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125617636..125617646, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125618739..125618756,-#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125618739..125618756, - |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125648685..125648688,-#_c38747dd6812763f8872ffe5ad95553e | p3@PATE2 |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:69951723..69951737,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:69951723..69951737, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125616184..125616201,+#_c38747dd6812763f8872ffe5ad95553e | p2@PATE1 |
| 6.94e-147 | FFCP PHASE1:Hg19::chr15:25165150..25165161,+#_c38747dd6812763f8872ffe5ad95553e | p@chr15:25165150..25165161, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chrX:112044378..112044412,-#_c38747dd6812763f8872ffe5ad95553e | p@chrX:112044378..112044412, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr14:21214091..21214097,+#_c38747dd6812763f8872ffe5ad95553e | p3@EDDM3A |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125617607..125617617,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125617607..125617617, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125618495..125618517,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125618495..125618517, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr14:105935020..105935028,-#_c38747dd6812763f8872ffe5ad95553e | p@chr14:105935020..105935028, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr15:25165150..25165161,+#_c38747dd6812763f8872ffe5ad95553e | p@chr15:25165150..25165161, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125648641..125648646,-#_c38747dd6812763f8872ffe5ad95553e | p2@PATE2 |
| 6.94e-147 | FFCP PHASE2:Hg19::chr14:105935020..105935028,-#_c38747dd6812763f8872ffe5ad95553e | p@chr14:105935020..105935028, - |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:69951723..69951737,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:69951723..69951737, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125617636..125617646,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125617636..125617646, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125618661..125618677,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125618661..125618677, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr3:140961228..140961237,+#_c38747dd6812763f8872ffe5ad95553e | p@chr3:140961228..140961237, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr14:21213984..21213993,+#_c38747dd6812763f8872ffe5ad95553e | p2@EDDM3A |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125648685..125648688,-#_c38747dd6812763f8872ffe5ad95553e | p3@PATE2 |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125616184..125616201,+#_c38747dd6812763f8872ffe5ad95553e | p2@PATE1 |
| 6.94e-147 | FFCP PHASE2:Hg19::chr9:138555154..138555159,+#_c38747dd6812763f8872ffe5ad95553e | p1@LCN9 |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125618495..125618517,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125618495..125618517, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125618739..125618756,-#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125618739..125618756, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:69950851..69950887,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:69950851..69950887, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chr14:21213984..21213993,+#_c38747dd6812763f8872ffe5ad95553e | p2@EDDM3A |
| 6.94e-147 | FFCP PHASE1:Hg19::chr11:125617607..125617617,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125617607..125617617, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr3:140961228..140961237,+#_c38747dd6812763f8872ffe5ad95553e | p@chr3:140961228..140961237, + |
| 6.94e-147 | FFCP PHASE2:Hg19::chrX:112044378..112044412,-#_c38747dd6812763f8872ffe5ad95553e | p@chrX:112044378..112044412, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr11:125618661..125618677,+#_c38747dd6812763f8872ffe5ad95553e | p@chr11:125618661..125618677, + |
| 8.91e-111 | FFCP PHASE2:Hg19::chr11:69951071..69951079,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p@chr11:69951071..69951079, + |
| 8.91e-111 | FFCP PHASE1:Hg19::chr10:119307515..119307518,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p23@EMX2 |
| 8.91e-111 | FFCP PHASE2:Hg19::chr14:21214039..21214057,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p1@EDDM3A |
| 8.91e-111 | FFCP PHASE2:Hg19::chr10:114094924..114094935,-#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p@chr10:114094924..114094935, - |
| 8.91e-111 | FFCP PHASE1:Hg19::chr11:69951071..69951079,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p@chr11:69951071..69951079, + |
| 8.91e-111 | FFCP PHASE2:Hg19::chr10:119307515..119307518,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p23@EMX2 |
| 8.91e-111 | FFCP PHASE2:Hg19::chr7:25702669..25702678,-#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p4@ENST00000446840, p4@uc003sxp.1 |
| 8.91e-111 | FFCP PHASE1:Hg19::chr16:2126158..2126172,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p9@TSC2 |
| 8.91e-111 | FFCP PHASE2:Hg19::chr11:92922903..92922918,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p@chr11:92922903..92922918, + |
| 8.91e-111 | FFCP PHASE1:Hg19::chr10:114094924..114094935,-#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p@chr10:114094924..114094935, - |
| 8.91e-111 | FFCP PHASE1:Hg19::chr14:21214039..21214057,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p1@EDDM3A |
| 8.91e-111 | FFCP PHASE2:Hg19::chr16:2126158..2126172,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p9@TSC2 |
| 8.91e-111 | FFCP PHASE1:Hg19::chr11:92922903..92922918,+#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p@chr11:92922903..92922918, + |
| 8.91e-111 | FFCP PHASE1:Hg19::chr7:25702669..25702678,-#_4f1f011fe3b99afe8bf9ab96b4b4d9ce | p4@ENST00000446840, p4@uc003sxp.1 |
| 1.3e-110 | FFCP PHASE1:Hg19::chr17:59475447..59475455,+#_45362432bd4712d7e8a1ae1ee2b95baf | p@chr17:59475447..59475455, + |
| 1.3e-110 | FFCP PHASE2:Hg19::chr17:59475447..59475455,+#_45362432bd4712d7e8a1ae1ee2b95baf | p@chr17:59475447..59475455, + |
| 1.3e-110 | FFCP PHASE1:Hg19::chr11:125706033..125706038,+#_45362432bd4712d7e8a1ae1ee2b95baf | p@chr11:125706033..125706038, + |
| 1.3e-110 | FFCP PHASE2:Hg19::chr11:69950033..69950046,+#_45362432bd4712d7e8a1ae1ee2b95baf | p11@ANO1 |
| 1.3e-110 | FFCP PHASE2:Hg19::chr11:125706033..125706038,+#_45362432bd4712d7e8a1ae1ee2b95baf | p@chr11:125706033..125706038, + |
| 1.3e-110 | FFCP PHASE1:Hg19::chr15:64423864..64423884,+#_45362432bd4712d7e8a1ae1ee2b95baf | p8@SNX1 |
| 1.3e-110 | FFCP PHASE2:Hg19::chr15:64423864..64423884,+#_45362432bd4712d7e8a1ae1ee2b95baf | p8@SNX1 |
| 1.3e-110 | FFCP PHASE1:Hg19::chr11:69950033..69950046,+#_45362432bd4712d7e8a1ae1ee2b95baf | p11@ANO1 |
| 1.89e-110 | FFCP PHASE1:Hg19::chr10:102505147..102505162,+#_611d11659285a3602a9e16d44c3ce609 | p9@PAX2 |
| 1.89e-110 | FFCP PHASE1:Hg19::chr2:87985242..87985251,-#_611d11659285a3602a9e16d44c3ce609 | p@chr2:87985242..87985251, - |
| 1.89e-110 | FFCP PHASE2:Hg19::chr10:102505147..102505162,+#_611d11659285a3602a9e16d44c3ce609 | p9@PAX2 |
| 1.89e-110 | FFCP PHASE2:Hg19::chr2:87985242..87985251,-#_611d11659285a3602a9e16d44c3ce609 | p@chr2:87985242..87985251, - |
| 2.76e-110 | FFCP PHASE2:Hg19::chr3:107201385..107201388,-#_b59dbfeffe1b92310abf11f9374ef872 | p@chr3:107201385..107201388, - |
| 2.76e-110 | FFCP PHASE1:Hg19::chr3:107201385..107201388,-#_b59dbfeffe1b92310abf11f9374ef872 | p@chr3:107201385..107201388, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:126515178..126515204,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr12:126515178..126515204, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:177684007..177684011,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p1@ENST00000451851 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43851532..43851542,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43851532..43851542, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43836287..43836295,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43836287..43836295, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:11289165..11289191,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chrX:11289165..11289191, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43851436..43851450,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43851436..43851450, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:44144280..44144288,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p2@SPINT3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:15730000..15730004,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr19:15730000..15730004, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43836518..43836524,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43836518..43836524, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43850450..43850493,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43850450..43850493, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:15729741..15729749,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr19:15729741..15729749, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:16913211..16913222,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chrX:16913211..16913222, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:8083905..8083915,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr10:8083905..8083915, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43850403..43850416,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43850403..43850416, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:34841932..34841939,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr11:34841932..34841939, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:24298569..24298574,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p6@ADAM7 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43851110..43851138,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43851110..43851138, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:70856430..70856440,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr6:70856430..70856440, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43838296..43838299,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43838296..43838299, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:20265757..20265766,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr19:20265757..20265766, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43837317..43837329,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43837317..43837329, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43851184..43851194,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43851184..43851194, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:26217127..26217131,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr1:26217127..26217131, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:25165137..25165145,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr15:25165137..25165145, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43852924..43852944,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43852924..43852944, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43836142..43836161,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43836142..43836161, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:103347376..103347414,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr13:103347376..103347414, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43837196..43837202,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43837196..43837202, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:43851992..43851993,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43851992..43851993, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:125657931..125657940,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p3@PATE3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:1032745..1032750,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr11:1032745..1032750, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43850865..43850873,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr20:43850865..43850873, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:43835380..43835384,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p2@SEMG1, p3@SEMG2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:183230812..183230815,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr1:183230812..183230815, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:91849948..91849962,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr15:91849948..91849962, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:15736305..15736328,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr19:15736305..15736328, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:72173239..72173251,-#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr16:72173239..72173251, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:49699854..49699887,+#_5d9c3e0d0dc6b5d8c4967ccfb3feb1a7 | p@chr3:49699854..49699887, + |
