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|develops_from=UBERON:0008425
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Revision as of 17:06, 26 June 2012

Name:mammary placode
Definition:"The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper[GO]." [GO:0060596]
Comments:TODO develops_from

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005085(ectodermal placode)



Children

develops from:UBERON:0005333 (mammary bud)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005311 (mammary placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.72e-89FFCP PHASE1:Hg19::chr12:122439564..122439597,+#_68eadd04ad6c9526d6e8de375b98bfb1p4@WDR66
5.72e-89FFCP PHASE2:Hg19::chr12:122439564..122439597,+#_68eadd04ad6c9526d6e8de375b98bfb1p4@WDR66
2.57e-88FFCP PHASE2:Hg19::chr19:15160255..15160260,+#_2a4f481679d65f48b816b3eea23a99f1p4@CASP14
2.57e-88FFCP PHASE1:Hg19::chr19:15160255..15160260,+#_2a4f481679d65f48b816b3eea23a99f1p4@CASP14
1.87e-86FFCP PHASE1:Mm9::chr15:103394653..103394683,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103394653..103394683, -
1.87e-86FFCP PHASE2:Mm9::chr13:111655159..111655168,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr13:111655159..111655168, +
1.87e-86FFCP PHASE2:Mm9::chr4:118636782..118636786,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118636782..118636786, +
1.87e-86FFCP PHASE2:Mm9::chr7:112544745..112544756,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr7:112544745..112544756, -
1.87e-86FFCP PHASE1:Mm9::chr13:23550306..23550308,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr13:23550306..23550308, -
1.87e-86FFCP PHASE1:Mm9::chr11:109658712..109658715,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:109658712..109658715, -
1.87e-86FFCP PHASE2:Mm9::chr6:137412973..137412974,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:137412973..137412974, +
1.87e-86FFCP PHASE2:Mm9::chr5:88095990..88096001,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88095990..88096001, +
1.87e-86FFCP PHASE1:Mm9::chr7:75913214..75913218,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr7:75913214..75913218, -
1.87e-86FFCP PHASE1:Mm9::chr18:15483458..15483466,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:15483458..15483466, +
1.87e-86FFCP PHASE2:Mm9::chr9:77686674..77686686,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr9:77686674..77686686, +
1.87e-86FFCP PHASE2:Mm9::chr5:88210863..88210879,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88210863..88210879, -
1.87e-86FFCP PHASE1:Mm9::chr6:35361971..35361978,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:35361971..35361978, +
1.87e-86FFCP PHASE1:Mm9::chr4:118636825..118636828,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118636825..118636828, +
1.87e-86FFCP PHASE2:Mm9::chr12:53708625..53708630,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr12:53708625..53708630, +
1.87e-86FFCP PHASE2:Mm9::chr5:88121676..88121704,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88121676..88121704, -
1.87e-86FFCP PHASE1:Mm9::chr5:88215607..88215628,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88215607..88215628, +
1.87e-86FFCP PHASE1:Mm9::chr5:88107041..88107085,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88107041..88107085, +
1.87e-86FFCP PHASE2:Mm9::chr11:29447361..29447364,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:29447361..29447364, -
1.87e-86FFCP PHASE2:Mm9::chr5:88358854..88358874,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358854..88358874, +
1.87e-86FFCP PHASE2:Mm9::chr19:56109584..56109587,+#_30b6d7c8bf53f346980477d3b2cc2429p1@uc008hyp.1
1.87e-86FFCP PHASE2:Mm9::chr5:88123745..88123777,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123745..88123777, +
1.87e-86FFCP PHASE2:Mm9::chr4:118627429..118627443,-#_30b6d7c8bf53f346980477d3b2cc2429p1@ENSMUST00000155069, p1@uc008ulc.1
1.87e-86FFCP PHASE2:Mm9::chr7:109210996..109211006,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr7:109210996..109211006, -
1.87e-86FFCP PHASE1:Mm9::chr5:88358825..88358828,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358825..88358828, +
1.87e-86FFCP PHASE1:Mm9::chr5:88123649..88123664,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123649..88123664, -
1.87e-86FFCP PHASE2:Mm9::chrX:158813399..158813404,-#_30b6d7c8bf53f346980477d3b2cc2429p@chrX:158813399..158813404, -
1.87e-86FFCP PHASE2:Mm9::chr4:118637931..118637942,+#_30b6d7c8bf53f346980477d3b2cc2429p7@Lao1
1.87e-86FFCP PHASE1:Mm9::chr5:151567394..151567401,+#_30b6d7c8bf53f346980477d3b2cc2429p9@Pds5b
1.87e-86FFCP PHASE2:Mm9::chr5:88209047..88209050,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88209047..88209050, -
1.87e-86FFCP PHASE1:Mm9::chr11:6535604..6535612,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:6535604..6535612, +
1.87e-86FFCP PHASE2:Mm9::chr15:103393764..103393775,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393764..103393775, -
1.87e-86FFCP PHASE2:Mm9::chr5:88107092..88107108,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88107092..88107108, -
1.87e-86FFCP PHASE1:Mm9::chrX:158813399..158813404,-#_30b6d7c8bf53f346980477d3b2cc2429p@chrX:158813399..158813404, -
1.87e-86FFCP PHASE1:Mm9::chr5:88210841..88210848,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88210841..88210848, +
1.87e-86FFCP PHASE1:Mm9::chr5:88103072..88103090,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88103072..88103090, +
1.87e-86FFCP PHASE1:Mm9::chr4:43404975..43404982,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:43404975..43404982, +
1.87e-86FFCP PHASE1:Mm9::chr15:103393425..103393435,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393425..103393435, -
1.87e-86FFCP PHASE1:Mm9::chr5:88240375..88240378,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88240375..88240378, +
1.87e-86FFCP PHASE1:Mm9::chr5:88121858..88121866,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88121858..88121866, -
1.87e-86FFCP PHASE2:Mm9::chr3:25229830..25229833,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr3:25229830..25229833, +
1.87e-86FFCP PHASE2:Mm9::chr5:88361470..88361479,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88361470..88361479, +
1.87e-86FFCP PHASE2:Mm9::chr10:46245998..46245999,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr10:46245998..46245999, +
1.87e-86FFCP PHASE1:Mm9::chr3:155015789..155015791,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr3:155015789..155015791, -
1.87e-86FFCP PHASE2:Mm9::chr5:88204809..88204827,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88204809..88204827, +
1.87e-86FFCP PHASE1:Mm9::chr5:88126303..88126323,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88126303..88126323, -
1.87e-86FFCP PHASE1:Mm9::chr11:48162734..48162736,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:48162734..48162736, -
1.87e-86FFCP PHASE2:Mm9::chr15:103393352..103393360,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393352..103393360, -
1.87e-86FFCP PHASE2:Mm9::chr5:88103101..88103120,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88103101..88103120, -
1.87e-86FFCP PHASE1:Mm9::chr5:88207974..88207986,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88207974..88207986, +
1.87e-86FFCP PHASE1:Mm9::chr5:88097629..88097633,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88097629..88097633, +
1.87e-86FFCP PHASE1:Mm9::chr1:193093195..193093197,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr1:193093195..193093197, -
1.87e-86FFCP PHASE1:Mm9::chr18:6733777..6733786,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:6733777..6733786, +
1.87e-86FFCP PHASE2:Mm9::chr5:88217569..88217586,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88217569..88217586, +
1.87e-86FFCP PHASE1:Mm9::chr15:103393227..103393240,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393227..103393240, -
1.87e-86FFCP PHASE2:Mm9::chr11:6535571..6535575,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:6535571..6535575, -
1.87e-86FFCP PHASE2:Mm9::chr9:68417059..68417064,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr9:68417059..68417064, -
1.87e-86FFCP PHASE2:Mm9::chr5:88123612..88123619,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123612..88123619, +
1.87e-86FFCP PHASE2:Mm9::chr15:85620623..85620633,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:85620623..85620633, -
1.87e-86FFCP PHASE2:Mm9::chr5:88358910..88358931,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358910..88358931, +
1.87e-86FFCP PHASE2:Mm9::chr5:38893346..38893365,-#_30b6d7c8bf53f346980477d3b2cc2429p5@Slc2a9
1.87e-86FFCP PHASE1:Mm9::chr16:93598605..93598606,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr16:93598605..93598606, -
1.87e-86FFCP PHASE2:Mm9::chr5:88126190..88126195,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88126190..88126195, -
1.87e-86FFCP PHASE1:Mm9::chr5:88359113..88359133,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88359113..88359133, -
1.87e-86FFCP PHASE1:Mm9::chr5:88123891..88123910,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123891..88123910, +
1.87e-86FFCP PHASE2:Mm9::chr5:88098006..88098035,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88098006..88098035, +
1.87e-86FFCP PHASE2:Mm9::chr5:53394250..53394255,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:53394250..53394255, +
1.87e-86FFCP PHASE1:Mm9::chr4:118634330..118634340,+#_30b6d7c8bf53f346980477d3b2cc2429p4@Lao1
1.87e-86FFCP PHASE1:Mm9::chr15:98312614..98312624,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:98312614..98312624, -
1.87e-86FFCP PHASE2:Mm9::chr15:98312614..98312624,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:98312614..98312624, -
1.87e-86FFCP PHASE2:Mm9::chr1:40637157..40637179,+#_30b6d7c8bf53f346980477d3b2cc2429p3@Slc9a4
1.87e-86FFCP PHASE2:Mm9::chr5:88214300..88214314,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88214300..88214314, +
1.87e-86FFCP PHASE1:Mm9::chr6:51296751..51296773,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:51296751..51296773, -
1.87e-86FFCP PHASE1:Mm9::chr4:118640761..118640774,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118640761..118640774, +
1.87e-86FFCP PHASE2:Mm9::chr6:24162312..24162345,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:24162312..24162345, -
1.87e-86FFCP PHASE2:Mm9::chr5:88123526..88123536,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123526..88123536, +
1.87e-86FFCP PHASE2:Mm9::chr17:30084999..30085000,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr17:30084999..30085000, +
1.87e-86FFCP PHASE1:Mm9::chr5:88215680..88215714,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88215680..88215714, -
1.87e-86FFCP PHASE1:Mm9::chr5:88109869..88109894,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88109869..88109894, +
1.87e-86FFCP PHASE2:Mm9::chr18:6733891..6733896,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:6733891..6733896, +
1.87e-86FFCP PHASE1:Mm9::chr7:109210996..109211006,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr7:109210996..109211006, -
1.87e-86FFCP PHASE1:Mm9::chr2:93360875..93360880,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr2:93360875..93360880, -
1.87e-86FFCP PHASE1:Mm9::chr15:103393812..103393824,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103393812..103393824, -
1.87e-86FFCP PHASE2:Mm9::chr5:88123868..88123890,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123868..88123890, +
1.87e-86FFCP PHASE2:Mm9::chr4:118634471..118634476,+#_30b6d7c8bf53f346980477d3b2cc2429p9@Lao1
1.87e-86FFCP PHASE1:Mm9::chr5:88358893..88358897,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88358893..88358897, +
1.87e-86FFCP PHASE1:Mm9::chr5:88123708..88123719,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88123708..88123719, -
1.87e-86FFCP PHASE2:Mm9::chr18:79024191..79024193,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr18:79024191..79024193, +
1.87e-86FFCP PHASE2:Mm9::chr4:118641223..118641237,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118641223..118641237, -
1.87e-86FFCP PHASE2:Mm9::chr11:121057666..121057669,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr11:121057666..121057669, -
1.87e-86FFCP PHASE2:Mm9::chr5:88210806..88210830,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr5:88210806..88210830, +
1.87e-86FFCP PHASE2:Mm9::chr14:32247461..32247472,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr14:32247461..32247472, -
1.87e-86FFCP PHASE1:Mm9::chr6:137412973..137412974,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr6:137412973..137412974, +
1.87e-86FFCP PHASE1:Mm9::chr4:118636395..118636401,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr4:118636395..118636401, +
1.87e-86FFCP PHASE2:Mm9::chr9:60519767..60519772,+#_30b6d7c8bf53f346980477d3b2cc2429p@chr9:60519767..60519772, +
1.87e-86FFCP PHASE2:Mm9::chr15:103394653..103394683,-#_30b6d7c8bf53f346980477d3b2cc2429p@chr15:103394653..103394683, -

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