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|def="A bone that is part of a cranium." [UBERON:automatic]
|def="A bone that is part of a cranium." [UBERON:automatic]
|xref=SCTID:181792001
|xref=SCTID:181792001
|is_a=UBERON:0000032;;UBERON:0003457
|is_a=UBERON:0003457
|synonym="cranium bone" EXACT [UBERON:automatic]
|synonym="cranium bone" EXACT [UBERON:automatic]
|comment=
|comment=Note that here cranium = skull - mandible
|alt_id=
|alt_id=
|disjoint_from=
|disjoint_from=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0003128
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:05, 26 June 2012

Name:cranial bone
Definition:"A bone that is part of a cranium." [UBERON:automatic]
Xrefs:
links:
SCTID:181792001
Synonyms: "cranium bone" EXACT [UBERON:automatic]
Comments:Note that here cranium = skull - mandible

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003457(head bone)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004766 (cranial bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_393437a447275ec45333ee35d832e41dp4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_393437a447275ec45333ee35d832e41dp10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_393437a447275ec45333ee35d832e41dp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_393437a447275ec45333ee35d832e41dp4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_393437a447275ec45333ee35d832e41dp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_393437a447275ec45333ee35d832e41dp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_393437a447275ec45333ee35d832e41dp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_393437a447275ec45333ee35d832e41dp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_393437a447275ec45333ee35d832e41dp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_393437a447275ec45333ee35d832e41dp5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_393437a447275ec45333ee35d832e41dp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_393437a447275ec45333ee35d832e41dp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_393437a447275ec45333ee35d832e41dp4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_393437a447275ec45333ee35d832e41dp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_393437a447275ec45333ee35d832e41dp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_393437a447275ec45333ee35d832e41dp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_393437a447275ec45333ee35d832e41dp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_393437a447275ec45333ee35d832e41dp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_393437a447275ec45333ee35d832e41dp4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_393437a447275ec45333ee35d832e41dp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_393437a447275ec45333ee35d832e41dp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_393437a447275ec45333ee35d832e41dp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_393437a447275ec45333ee35d832e41dp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_393437a447275ec45333ee35d832e41dp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_393437a447275ec45333ee35d832e41dp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_393437a447275ec45333ee35d832e41dp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_393437a447275ec45333ee35d832e41dp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_393437a447275ec45333ee35d832e41dp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_393437a447275ec45333ee35d832e41dp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_393437a447275ec45333ee35d832e41dp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_393437a447275ec45333ee35d832e41dp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_393437a447275ec45333ee35d832e41dp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_393437a447275ec45333ee35d832e41dp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_393437a447275ec45333ee35d832e41dp11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_393437a447275ec45333ee35d832e41dp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_393437a447275ec45333ee35d832e41dp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_393437a447275ec45333ee35d832e41dp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_393437a447275ec45333ee35d832e41dp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_393437a447275ec45333ee35d832e41dp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_393437a447275ec45333ee35d832e41dp2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_393437a447275ec45333ee35d832e41dp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_393437a447275ec45333ee35d832e41dp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_393437a447275ec45333ee35d832e41dp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_393437a447275ec45333ee35d832e41dp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_393437a447275ec45333ee35d832e41dp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_393437a447275ec45333ee35d832e41dp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_393437a447275ec45333ee35d832e41dp2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_393437a447275ec45333ee35d832e41dp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_393437a447275ec45333ee35d832e41dp1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_393437a447275ec45333ee35d832e41dp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_393437a447275ec45333ee35d832e41dp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_393437a447275ec45333ee35d832e41dp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_393437a447275ec45333ee35d832e41dp5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_393437a447275ec45333ee35d832e41dp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_393437a447275ec45333ee35d832e41dp10@Otof
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_393437a447275ec45333ee35d832e41dp21@Espn
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_393437a447275ec45333ee35d832e41dp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_393437a447275ec45333ee35d832e41dp2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_393437a447275ec45333ee35d832e41dp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_393437a447275ec45333ee35d832e41dp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_393437a447275ec45333ee35d832e41dp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_393437a447275ec45333ee35d832e41dp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_393437a447275ec45333ee35d832e41dp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_393437a447275ec45333ee35d832e41dp2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_393437a447275ec45333ee35d832e41dp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_393437a447275ec45333ee35d832e41dp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_393437a447275ec45333ee35d832e41dp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_393437a447275ec45333ee35d832e41dp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_393437a447275ec45333ee35d832e41dp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_393437a447275ec45333ee35d832e41dp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_393437a447275ec45333ee35d832e41dp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_393437a447275ec45333ee35d832e41dp10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_393437a447275ec45333ee35d832e41dp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_393437a447275ec45333ee35d832e41dp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_393437a447275ec45333ee35d832e41dp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_393437a447275ec45333ee35d832e41dp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_393437a447275ec45333ee35d832e41dp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_393437a447275ec45333ee35d832e41dp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_393437a447275ec45333ee35d832e41dp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_393437a447275ec45333ee35d832e41dp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_393437a447275ec45333ee35d832e41dp2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_393437a447275ec45333ee35d832e41dp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_393437a447275ec45333ee35d832e41dp10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_393437a447275ec45333ee35d832e41dp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_393437a447275ec45333ee35d832e41dp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_393437a447275ec45333ee35d832e41dp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_393437a447275ec45333ee35d832e41dp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_393437a447275ec45333ee35d832e41dp7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_393437a447275ec45333ee35d832e41dp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_393437a447275ec45333ee35d832e41dp3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_393437a447275ec45333ee35d832e41dp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_393437a447275ec45333ee35d832e41dp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_393437a447275ec45333ee35d832e41dp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_393437a447275ec45333ee35d832e41dp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_393437a447275ec45333ee35d832e41dp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_393437a447275ec45333ee35d832e41dp7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_393437a447275ec45333ee35d832e41dp6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_393437a447275ec45333ee35d832e41dp2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_393437a447275ec45333ee35d832e41dp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_393437a447275ec45333ee35d832e41dp@chr12:109905468..109905474, +

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